Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Suillus_20brevipes_20[JGI_20Suibr1_202013-02-15] 1,550 sequences; 51,712,595 total letters Query= NC_031465.1 Length=360610 Score E Sequences producing significant alignments: (Bits) Value seq47 109 1e-18 seq16 93.3 1e-13 seq39 86.0 1e-11 >seq47 Length=240645 Score = 109 bits (120), Expect = 1e-18 Identities = 152/213 (71%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 151892 GAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATC 151951 ||| ||||| || || |||||||| || || |||||||| |||| | || | || || Sbjct 28197 GAGAACAAGGTGGAGGGTAGACTCCTTCTGAATGTTGTAGTCGGAAAGGGTGCGGCCGTC 28138 Query 151952 TTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTC 152011 ||| || || || ||||| || || | |||||| || | | ||| || ||||| || Sbjct 28137 TTCCAGCTGCTTGCCTGCGAAAATGAGGCGCTGCTGATCGGGAGGGATACCCTCCTTGTC 28078 Query 152012 TTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGT 152071 |||||| || || ||| | || | |||| ||| ||| || || | || || || Sbjct 28077 TTGAATCTTCGCCTTCACATTGTCGATAGTGTCAGAAGACTCCACCTCCAACGTGATCGT 28018 Query 152072 TTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 ||||||||||| ||||| ||||||| |||||| Sbjct 28017 CTTGCCCGTGAGGGTCTTGACGAAGATCTGCAT 27985 Score = 100 bits (110), Expect = 7e-16 Identities = 150/213 (70%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 151892 GAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATC 151951 ||| ||||| || || || ||||| || ||||||||||| |||| | ||| | || || Sbjct 27969 GAGAACAAGGTGGAGTGTGGACTCCTTCTGGATGTTGTAGTCGGAAAGAGTACGTCCGTC 27910 Query 151952 TTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTC 152011 ||| || || || |||||||| || | || || || | | || || ||||| || Sbjct 27909 TTCGAGCTGCTTGCCAGCGAAGATGAGTCGTTGTTGATCAGGGGGAATGCCCTCCTTGTC 27850 Query 152012 TTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGT 152071 || || ||| || || | || | | |||| || ||| ||||| | || || || Sbjct 27849 CTGGATCTTTGCCTTCACGTTGTCGATGGTGTCAGATGACTCCACTTCCAACGTGATCGT 27790 Query 152072 TTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 ||||||||||| ||||| ||||||| |||||| Sbjct 27789 CTTGCCCGTGAGGGTCTTGACGAAGATCTGCAT 27757 >seq16 Length=421267 Score = 93.3 bits (102), Expect = 1e-13 Identities = 150/214 (70%), Gaps = 4/214 (2%) Strand=Plus/Plus Query 151893 AGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCT 151952 || ||||| ||||| || ||| ||||||||||| ||||| | | || | |||||| Sbjct 331782 AGAACAAGGTGAAGGGTGCTCTCCTTTTGGATGTTATAATCAGAGAGCGTACGACCATCT 331841 Query 151953 TCTA--GGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTT 152010 || | ||||| || |||||||| || | || ||||| | | || |||||||| | Sbjct 331842 TCCAACTGCTTT--CCTGCGAAGATCAGGCGTTGTTGGTCAGGAGGAATGCCTTCCTTGT 331899 Query 152011 CTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAG 152070 | ||||| ||| || ||| | || | |||| || ||| || || | ||| || | Sbjct 331900 CCTGAATCTTTGCCTTCACATTGTCGATAGTGTCGGATGACTCCACCTCCAAAGTGATGG 331959 Query 152071 TTTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 | || |||||||| ||||| || || | |||||| Sbjct 331960 TCTTCCCCGTGAGGGTCTTAACAAAAATCTGCAT 331993 Score = 91.5 bits (100), Expect = 3e-13 Identities = 148/210 (70%), Gaps = 5/210 (2%) Strand=Plus/Plus Query 151897 CAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTA 151956 |||| ||||| |||||||| || |||||||||||||| | | || | || ||||| | Sbjct 332015 CAAG-TGAAGCGTAGACTCCTTCTGGATGTTGTAATCCGAAAGCGTGCGACCGTCTTCCA 332073 Query 151957 --GGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTG 152014 ||||| || || |||||||| | ||||| || | | || |||||||| ||||| Sbjct 332074 ACTGCTTT--CCAGCAAAGATAAGGCGTTGCTGATCAGGGGGAATGCCTTCCTTGTCTTG 332131 Query 152015 AATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTT 152074 ||||| || || | || | | |||| || || ||||| | || || || || Sbjct 332132 GATTTTCGCCTTCACGTTGTCGATGGTGTCGGATGATTCCACTTCCAACGTGATGGTCTT 332191 Query 152075 GCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 |||||||| ||||| || || | |||||| Sbjct 332192 ACCCGTGAGGGTCTTGACAAAAATCTGCAT 332221 >seq39 Length=270505 Score = 86.0 bits (94), Expect = 1e-11 Identities = 139/196 (71%), Gaps = 8/196 (4%) Strand=Plus/Minus Query 151901 ATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCC--CATCTTCTAGG 151958 ||||| || ||||| ||||| || ||||| || | |||| | | ||||||| || Sbjct 5972 ATGAATCGTCGACTCCTTTTGAATATTGTAGTCCG--AAAGCTTGCGGTCATCTTCAAGC 5915 Query 151959 CTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAATT 152018 | || || ||||||| |||| |||||||||| | ||||||||||| |||||||| Sbjct 5914 GTGTTTCCAGCGAAGACGAGCCGTTGCTGGTCCGGTGGAATTCCTTCCTTGTCTTGAATC 5855 Query 152019 TTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTA--ATAGTTTTGC 152076 ||| ||||||| | | |||| || ||| ||| | | ||| | || || || | Sbjct 5854 TTTGATTTGACACTGTGTACGGAATCGTCACTTTCTGC--CCAGACAACTATGGTCTTTC 5797 Query 152077 CCGTGAGAGTCTTCAC 152092 |||| || |||||||| Sbjct 5796 CCGTAAGGGTCTTCAC 5781 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1153797885840050