Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Suillus_20brevipes_20[JGI_20Suibr1_202013-02-15] 1,550 sequences; 51,712,595 total letters Query= NC_032001.1 Length=327147 Score E Sequences producing significant alignments: (Bits) Value seq16 170 4e-37 seq47 161 2e-34 seq14 100 6e-16 seq101 89.7 1e-12 seq34 89.7 1e-12 seq4 89.7 1e-12 >seq16 Length=421267 Score = 170 bits (188), Expect = 4e-37 Identities = 174/227 (77%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 282873 CCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCA 282932 |||||||| || ||||| || || || | ||||| || ||||||||||| || |||| Sbjct 331767 CCACCACGAAGACGAAGAACAAGGTGAAGGGTGCTCTCCTTTTGGATGTTATAATCAGAG 331826 Query 282933 AGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGA 282992 ||||| || ||||| || | || || || || ||||||| |||||||||||| ||| Sbjct 331827 AGCGTACGACCATCTTCCAACTGCTTTCCTGCGAAGATCAGGCGTTGTTGGTCAGGAGGA 331886 Query 282993 ATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACT 283052 || || |||||||| || |||||||| || || | ||||||||||| || | || || Sbjct 331887 ATGCCTTCCTTGTCCTGAATCTTTGCCTTCACATTGTCGATAGTGTCGGATGACTCCACC 331946 Query 283053 TCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 || | |||||| ||||| ||||| | |||||||| || |||||||| Sbjct 331947 TCCAAAGTGATGGTCTTCCCCGTGAGGGTCTTAACAAAAATCTGCAT 331993 Score = 152 bits (168), Expect = 1e-31 Identities = 170/227 (75%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 282873 CCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCA 282932 || ||||| || || || || || || | ||| ||| || || || ||||| || | Sbjct 332223 CCTCCACGGAGACGTAGAACGAGGTGAAGGGTGGATTCCTTCTGAATATTGTAATCTGAG 332282 Query 282933 AGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGA 282992 || |||||||| || || | || || ||||||||||| | |||||||||||| ||| Sbjct 332283 AGTGTGCGGCCGTCTTCCAACTGCTTTCCGGCAAAGATGAGGCGTTGTTGGTCAGGAGGA 332342 Query 282993 ATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACT 283052 || || |||||||| || ||||||||||| ||| | ||||| || || || | || ||| Sbjct 332343 ATGCCTTCCTTGTCCTGAATCTTTGCTTTCACGTTGTCGATGGTATCGGAGGACTCTACT 332402 Query 283053 TCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 || | ||||| ||||| ||||| | ||||||||||| |||||||| Sbjct 332403 TCCAACGTGATGGTCTTCCCCGTGAGGGTCTTAACGAAAATCTGCAT 332449 Score = 141 bits (156), Expect = 2e-28 Identities = 146/191 (76%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 282909 TCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAG 282968 || || ||||||||||| || | ||||||||| || || || | || || || |||||| Sbjct 332031 TCCTTCTGGATGTTGTAATCCGAAAGCGTGCGACCGTCTTCCAACTGCTTTCCAGCAAAG 332090 Query 282969 ATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTA 283028 || | ||||| || ||| ||||| || |||||||||||||| || || || ||| | Sbjct 332091 ATAAGGCGTTGCTGATCAGGGGGAATGCCTTCCTTGTCTTGGATTTTCGCCTTCACGTTG 332150 Query 283029 TCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACG 283088 ||||| ||||| || | ||| ||||| | ||||| ||||||||||| | ||||| || Sbjct 332151 TCGATGGTGTCGGATGATTCCACTTCCAACGTGATGGTCTTACCCGTGAGGGTCTTGACA 332210 Query 283089 AATATCTGCAT 283099 || |||||||| Sbjct 332211 AAAATCTGCAT 332221 Score = 84.2 bits (92), Expect = 5e-11 Identities = 81/104 (78%), Gaps = 0/104 (0%) Strand=Plus/Plus Query 282996 CCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACTTCG 283055 ||||| |||||||||||||| || || ||| ||||||| ||||| |||| ||||| || Sbjct 332625 CCCTCTTTGTCTTGGATCTTGGCCTTAACGTTATCGATCGTGTCAGAAGACTCGACCTCT 332684 Query 283056 AGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 | ||||| ||||| || || | || || || || |||||||| Sbjct 332685 AACGTGATGGTCTTGCCGGTGAGGGTTTTGACAAAAATCTGCAT 332728 >seq47 Length=240645 Score = 161 bits (178), Expect = 2e-34 Identities = 172/227 (76%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 282873 CCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCA 282932 |||||||| || || ||||| || || | ||||| || || ||||| ||||| || | Sbjct 28439 CCACCACGAAGACGGAGTACAAGGTGAAGGGTGCTCTCCTTCTGGATATTGTAATCCGAC 28380 Query 282933 AGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGA 282992 |||||||| || ||||| | || || ||||||||||||| ||| || ||||| ||| Sbjct 28379 AGCGTGCGCCCGTCCTCCAACTGCTTTCCGGCAAAGATCAGACGCTGCTGGTCTGGTGGA 28320 Query 282993 ATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACT 283052 || ||||| ||||| || ||||| || || ||| | ||||| ||||| || | || || Sbjct 28319 ATGCCCTCTTTGTCCTGAATCTTCGCCTTGACGTTGTCGATGGTGTCTGACGACTCCACC 28260 Query 283053 TCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 || | ||||| ||||||||||| | ||||| ||||| |||||||| Sbjct 28259 TCCAATGTGATTGTCTTACCCGTGAGGGTCTTGACGAAGATCTGCAT 28213 Score = 158 bits (174), Expect = 3e-33 Identities = 171/227 (75%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 282873 CCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCA 282932 || ||||| || || || || || || | ||| || || |||||||||||||| | | Sbjct 27983 CCGCCACGAAGACGGAGAACAAGGTGGAGTGTGGACTCCTTCTGGATGTTGTAGTCGGAA 27924 Query 282933 AGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGA 282992 || || || || || || || || || || || ||||| | |||||||| ||| ||| Sbjct 27923 AGAGTACGTCCGTCTTCGAGCTGCTTGCCAGCGAAGATGAGTCGTTGTTGATCAGGGGGA 27864 Query 282993 ATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACT 283052 || ||||||||||| ||||||||||| || ||| | ||||| ||||| || | || ||| Sbjct 27863 ATGCCCTCCTTGTCCTGGATCTTTGCCTTCACGTTGTCGATGGTGTCAGATGACTCCACT 27804 Query 283053 TCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 || | ||||||||||| ||||| | ||||| ||||| |||||||| Sbjct 27803 TCCAACGTGATCGTCTTGCCCGTGAGGGTCTTGACGAAGATCTGCAT 27757 Score = 136 bits (150), Expect = 8e-27 Identities = 167/228 (73%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931 ||| ||||| || || || || || || | || || || || ||||||||||| | Sbjct 28212 ACCGCCACGAAGACGGAGAACAAGGTGGAGGGTAGACTCCTTCTGAATGTTGTAGTCGGA 28153 Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991 ||| |||||||| || || || || || || || || || | || || || || || Sbjct 28152 AAGGGTGCGGCCGTCTTCCAGCTGCTTGCCTGCGAAAATGAGGCGCTGCTGATCGGGAGG 28093 Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051 ||||||||||||||||| ||||| || || || | ||||||||||| |||| || || Sbjct 28092 GATACCCTCCTTGTCTTGAATCTTCGCCTTCACATTGTCGATAGTGTCAGAAGACTCCAC 28033 Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 || | ||||||||||| ||||| | ||||| ||||| |||||||| Sbjct 28032 CTCCAACGTGATCGTCTTGCCCGTGAGGGTCTTGACGAAGATCTGCAT 27985 Score = 104 bits (114), Expect = 5e-17 Identities = 86/105 (82%), Gaps = 0/105 (0%) Strand=Plus/Minus Query 282996 CCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACTTCG 283055 |||||||||||||||||||| || || ||| ||||||| || || || | ||||| || Sbjct 27580 CCCTCCTTGTCTTGGATCTTGGCCTTGACGTTATCGATGGTATCAGAGGACTCGACCTCA 27521 Query 283056 AGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCATT 283100 |||||||| ||||| || || | ||||||||||| ||||||||| Sbjct 27520 AGAGTGATGGTCTTGCCGGTGAGCGTCTTAACGAAAATCTGCATT 27476 >seq14 Length=427353 Score = 100 bits (110), Expect = 6e-16 Identities = 136/185 (74%), Gaps = 6/185 (3%) Strand=Plus/Minus Query 230223 CTTATCGGCATGAATGCTGATCTCATGGGGCAATATATCGAATTCGTAGCTGATCGTATT 230282 || || |||||||| || | |||||| | || || ||||| ||||| || || || | Sbjct 81494 CTCATTGGCATGAACGCCAAGCTCATGTGCCAGTACATCGAGTTCGTTGCAGACCGCTTG 81435 Query 230283 TTCGTGGCGCTAGGGTACGAGAAAGTGT-ATAACTCCAAGAACCCCTTCGCTTTTATGGA 230341 || ||| |||| || |||| || |||| | ||| ||| ||||| || | || ||||| Sbjct 81434 TTGGTGTCGCTGGGCAACGACAAGGTGTTACAACGCCACCAACCCATTTGACTTCATGGA 81375 Query 230342 GCTCATTTCACTCCAGGGGAAAACTAACTTCTTCGAAAA--GCGTGTCAGCGATTA-TCA 230398 | || || || |||||||| || ||||||||||| || |||||||| || || ||| Sbjct 81374 CATGATCTCGCTACAGGGGAAGACCAACTTCTTCGAGAAGCGCGTGTCA--GACTACTCA 81317 Query 230399 AAGGC 230403 ||||| Sbjct 81316 AAGGC 81312 >seq101 Length=139910 Score = 89.7 bits (98), Expect = 1e-12 Identities = 144/206 (70%), Gaps = 17/206 (8%) Strand=Plus/Minus Query 282909 TCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAG 282968 || || |||||||||||||| | ||| || || || || || | || || || |||||| Sbjct 112889 TCCTTCTGGATGTTGTAGTCGGAAAGAGTACGACCGTCTTCGAACTGCTTGCCAGCAAAG 112830 Query 282969 ATCAAACGTTGTTGGTCA---------CCCGGAATACCCTCCTTGTCTTGGATCTTTGCT 283019 |||||||| ||||||||| | ||| || | || | ||| || |||| || Sbjct 112829 ATCAAACGCTGTTGGTCAGGGGAGACTCTCGG-ATGCGTTCGTCGTCCTGAGTCTTCGCC 112771 Query 283020 TTTA------CGGTATCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCC 283073 || | || | ||||| |||| |||| || |||| || ||| ||||||| ||| Sbjct 112770 TTGACGTTGTCGTTGTCGATGATGTCGGAAGGCTCCACTT-GAATGTGCTCGTCTTGCCC 112712 Query 283074 GTCAAAGTCTTAACGAATATCTGCAT 283099 || | ||||| ||||| |||||||| Sbjct 112711 GTGAGGGTCTTGACGAAGATCTGCAT 112686 >seq34 Length=318726 Score = 89.7 bits (98), Expect = 1e-12 Identities = 114/155 (74%), Gaps = 3/155 (2%) Strand=Plus/Minus Query 282915 TGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAA 282974 |||||||||||||| ||| || |||| || | | ||| || || ||||| | Sbjct 239257 TGGATGTTGTAGTCGCTAAGAGTACGGCTGTCTTGCAAC-GTT--CCAGCGAAGATGAGG 239201 Query 282975 CGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATA 283034 || ||||||||| ||||| || |||||||| ||||||||||| || ||| | ||||| Sbjct 239200 CGCTGTTGGTCAGGAGGAATGCCTTCCTTGTCCTGGATCTTTGCCTTCACGTTGTCGATG 239141 Query 283035 GTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTT 283069 |||||||| | ||| || || | |||| ||||| Sbjct 239140 GTGTCCGATGATTCCACCTCCAACGTGAGGGTCTT 239106 >seq4 Length=631323 Score = 89.7 bits (98), Expect = 1e-12 Identities = 88/114 (77%), Gaps = 0/114 (0%) Strand=Plus/Minus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931 ||||||||| || || || |||| || | |||| ||| ||||||||||||||||| Sbjct 303748 ACCACCACGGAGACGGAGAACCAAGTGAAGCGTGGATTCCTTTTGGATGTTGTAGTCGCT 303689 Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTC 282985 ||| || ||||| ||||| || || || || || ||||||| ||| || ||||| Sbjct 303688 AAGAGTACGGCCGTCCTCAAGCTGCTTTCCAGCGAAGATCAGACGCTGCTGGTC 303635 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1046718412413700