Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Suillus_20brevipes_20[JGI_20Suibr1_202013-02-15] 1,550 sequences; 51,712,595 total letters Query= NC_032255.1 Length=112536 Score E Sequences producing significant alignments: (Bits) Value seq47 165 6e-36 seq16 149 5e-31 >seq47 Length=240645 Score = 165 bits (182), Expect = 6e-36 Identities = 162/209 (78%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCC 44188 || |||||||| ||||||||||| ||||| |||||||| | || |||| |||| ||| Sbjct 28421 ACAAGGTGAAGGGTGCTCTCCTTCTGGATATTGTAATCCGACAGCGTGCGCCCGTCCTCC 28362 Query 44189 AGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTT 44248 | |||||| ||||||||||||| ||||||||| |||| || | || || || ||| Sbjct 28361 AACTGCTTTCCGGCAAAGATCAGACGCTGCTGGTCTGGTGGAATGCCCTCTTTGTCCTGA 28302 Query 44249 ATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTT 44308 |||||| ||| | | | |||||||| | || |||||||||| || || ||||| Sbjct 28301 ATCTTCGCCTTGACGTTGTCGATGGTGTCTGACGACTCCACCTCCAATGTGATTGTCTTA 28242 Query 44309 CCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 |||||||||||||| |||||||| ||||| Sbjct 28241 CCCGTGAGGGTCTTGACGAAGATCTGCAT 28213 Score = 145 bits (160), Expect = 5e-30 Identities = 158/210 (75%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCC 44188 || ||||| || || |||||| || |||||||| |||| || ||| |||| ||| Sbjct 28193 ACAAGGTGGAGGGTAGACTCCTTCTGAATGTTGTAGTCGGAAAGGGTGCGGCCGTCTTCC 28134 Query 44189 AGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTT 44248 |||||||| || || || || | ||||||||||| | ||| | ||| ||||| || Sbjct 28133 AGCTGCTTGCCTGCGAAAATGAGGCGCTGCTGATCGGGAGGGATACCCTCCTTGTCTTGA 28074 Query 44249 ATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTT 44308 |||||| ||||| | | || ||||| | || |||||||||| ||| |||||||| Sbjct 28073 ATCTTCGCCTTCACATTGTCGATAGTGTCAGAAGACTCCACCTCCAACGTGATCGTCTTG 28014 Query 44309 CCCGTGAGGGTCTTCACGAAGATTTGCATG 44338 |||||||||||||| |||||||| |||||| Sbjct 28013 CCCGTGAGGGTCTTGACGAAGATCTGCATG 27984 Score = 131 bits (144), Expect = 1e-25 Identities = 155/210 (74%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCC 44188 || ||||| || ||| |||||| ||||||||||| |||| || || |||| || Sbjct 27965 ACAAGGTGGAGTGTGGACTCCTTCTGGATGTTGTAGTCGGAAAGAGTACGTCCGTCTTCG 27906 Query 44189 AGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTT 44248 |||||||| || || ||||| | || || ||||| | || | || ||||| ||| Sbjct 27905 AGCTGCTTGCCAGCGAAGATGAGTCGTTGTTGATCAGGGGGAATGCCCTCCTTGTCCTGG 27846 Query 44249 ATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTT 44308 ||||| ||||| | | |||||||| | || ||||| |||| ||| |||||||| Sbjct 27845 ATCTTTGCCTTCACGTTGTCGATGGTGTCAGATGACTCCACTTCCAACGTGATCGTCTTG 27786 Query 44309 CCCGTGAGGGTCTTCACGAAGATTTGCATG 44338 |||||||||||||| |||||||| |||||| Sbjct 27785 CCCGTGAGGGTCTTGACGAAGATCTGCATG 27756 >seq16 Length=421267 Score = 149 bits (164), Expect = 5e-31 Identities = 172/232 (74%), Gaps = 0/232 (0%) Strand=Plus/Plus Query 44107 CATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATC 44166 ||| || || | || | ||| |||| ||||||||| |||||| |||||||||||||| Sbjct 331991 CATGCCTCCGCGAAGACGCAAGACCAAGTGAAGCGTAGACTCCTTCTGGATGTTGTAATC 332050 Query 44167 GGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGA 44226 | || ||| |||| |||| |||||| || |||||||| | || |||||||| | Sbjct 332051 CGAAAGCGTGCGACCGTCTTCCAACTGCTTTCCAGCAAAGATAAGGCGTTGCTGATCAGG 332110 Query 44227 AGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTC 44286 || | |||||||| || || ||| ||||| | | |||||||||| ||||| Sbjct 332111 GGGAATGCCTTCCTTGTCTTGGATTTTCGCCTTCACGTTGTCGATGGTGTCGGATGATTC 332170 Query 44287 CACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCATG 44338 ||| |||| ||| || ||||| |||||||||||||| || || || |||||| Sbjct 332171 CACTTCCAACGTGATGGTCTTACCCGTGAGGGTCTTGACAAAAATCTGCATG 332222 Score = 143 bits (158), Expect = 2e-29 Identities = 160/211 (76%), Gaps = 2/211 (1%) Strand=Plus/Plus Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCC 44188 || |||||||| ||| ||||| || || |||||||| | |||| ||| |||| ||| Sbjct 332241 ACGAGGTGAAGGGTGGATTCCTTCTGAATATTGTAATCTGAGAGTGTGCGGCCGTCTTCC 332300 Query 44189 AGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTT 44248 | |||||| ||||||||||| | || || || || | ||| | |||||||| ||| Sbjct 332301 AACTGCTTTCCGGCAAAGATGAGGCGTTGTTGGTCAGGAGGAATGCCTTCCTTGTCCTGA 332360 Query 44249 ATCTTCTGCTTCAATGTT-CCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTT 44307 ||||| ||||| | ||| | ||||| |||| ||| || || |||| ||| || ||||| Sbjct 332361 ATCTT-TGCTTTCACGTTGTCGATGGTATCGGAGGACTCTACTTCCAACGTGATGGTCTT 332419 Query 44308 TCCCGTGAGGGTCTTCACGAAGATTTGCATG 44338 |||||||||||||| ||||| || |||||| Sbjct 332420 CCCCGTGAGGGTCTTAACGAAAATCTGCATG 332450 Score = 140 bits (154), Expect = 2e-28 Identities = 157/210 (75%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCC 44188 || |||||||| |||||||||||||||||||| ||||| | ||| || | || ||| Sbjct 331785 ACAAGGTGAAGGGTGCTCTCCTTTTGGATGTTATAATCAGAGAGCGTACGACCATCTTCC 331844 Query 44189 AGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTT 44248 | |||||| || || ||||||| || || || || | ||| | |||||||| ||| Sbjct 331845 AACTGCTTTCCTGCGAAGATCAGGCGTTGTTGGTCAGGAGGAATGCCTTCCTTGTCCTGA 331904 Query 44249 ATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTT 44308 ||||| ||||| | | || ||||||| || |||||||||| || || ||||| Sbjct 331905 ATCTTTGCCTTCACATTGTCGATAGTGTCGGATGACTCCACCTCCAAAGTGATGGTCTTC 331964 Query 44309 CCCGTGAGGGTCTTCACGAAGATTTGCATG 44338 |||||||||||||| || || || |||||| Sbjct 331965 CCCGTGAGGGTCTTAACAAAAATCTGCATG 331994 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 359983599556350