Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Suillus_20brevipes_20[JGI_20Suibr1_202013-02-15] 1,550 sequences; 51,712,595 total letters Query= NC_033775.1 Length=376207 Score E Sequences producing significant alignments: (Bits) Value seq47 158 3e-33 seq16 143 6e-29 seq34 91.5 4e-13 seq39 89.7 1e-12 seq35 84.2 5e-11 >seq47 Length=240645 Score = 158 bits (174), Expect = 3e-33 Identities = 159/207 (77%), Gaps = 0/207 (0%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || || ||||| || || ||||| || || |||||||| | || ||||| || ||| Sbjct 27760 CAGATCTTCGTCAAGACCCTCACGGGCAAGACGATCACGTTGGAAGTGGAGTCATCTGAC 27819 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 |||||||| ||||| || |||||| |||||||| || || || || || || || ||| Sbjct 27820 ACCATCGACAACGTGAAGGCAAAGATCCAGGACAAGGAGGGCATTCCCCCTGATCAACAA 27879 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 ||||| |||||||| || || ||||||||||| ||| | |||||| |||| || ||| || Sbjct 27880 CGACTCATCTTCGCTGGCAAGCAGCTCGAAGACGGACGTACTCTTTCCGACTACAACATC 27939 Query 178104 CAAAAAGAATCAACACTGCATCTTGTT 178130 || || || || ||||| || |||||| Sbjct 27940 CAGAAGGAGTCCACACTCCACCTTGTT 27966 Score = 129 bits (142), Expect = 1e-24 Identities = 152/206 (74%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || || ||||| || || ||||| || || || ||||| | |||||||| |||||| Sbjct 28216 CAGATCTTCGTCAAGACCCTCACGGGTAAGACAATCACATTGGAGGTGGAGTCGTCAGAC 28275 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 |||||||| |||||||| ||||||||||||||||| || || || || |||||||| Sbjct 28276 ACCATCGACAACGTCAAGGCGAAGATTCAGGACAAAGAGGGCATTCCACCAGACCAGCAG 28335 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || || ||||| |||||||| ||| | || || || | || || | ||||| || || Sbjct 28336 CGTCTGATCTTTGCCGGAAAGCAGTTGGAGGACGGGCGCACGCTGTCGGATTACAATATC 28395 Query 178104 CAAAAAGAATCAACACTGCATCTTGT 178129 || || || || || || ||||| Sbjct 28396 CAGAAGGAGAGCACCCTTCACCTTGT 28421 >seq16 Length=421267 Score = 143 bits (158), Expect = 6e-29 Identities = 156/207 (75%), Gaps = 0/207 (0%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || ||||| || || || ||||| || || || ||||| | |||||||| || ||| Sbjct 331990 CAGATTTTTGTTAAGACCCTCACGGGGAAGACCATCACTTTGGAGGTGGAGTCATCCGAC 331931 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 || ||||| || || || ||||||||||||||| ||||| || ||||| ||||| ||| Sbjct 331930 ACTATCGACAATGTGAAGGCAAAGATTCAGGACAAGGAAGGCATTCCTCCTGACCAACAA 331871 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || || |||||||| ||||| ||| | |||||||| | || || | ||||||||| || Sbjct 331870 CGCCTGATCTTCGCAGGAAAGCAGTTGGAAGATGGTCGTACGCTCTCTGATTATAACATC 331811 Query 178104 CAAAAAGAATCAACACTGCATCTTGTT 178130 ||||| || || || || |||||| Sbjct 331810 CAAAAGGAGAGCACCCTTCACCTTGTT 331784 Score = 140 bits (154), Expect = 8e-28 Identities = 155/207 (75%), Gaps = 0/207 (0%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || |||||||| || || ||||| || || || ||||| | || || || ||| || Sbjct 332446 CAGATTTTCGTTAAGACCCTCACGGGGAAGACCATCACGTTGGAAGTAGAGTCCTCCGAT 332387 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 |||||||| ||||| ||| ||||||||||||||| ||||| || ||||| ||||| ||| Sbjct 332386 ACCATCGACAACGTGAAAGCAAAGATTCAGGACAAGGAAGGCATTCCTCCTGACCAACAA 332327 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || || ||||| |||||||| ||| | ||||| || | || || | ||||| || | Sbjct 332326 CGCCTCATCTTTGCCGGAAAGCAGTTGGAAGACGGCCGCACACTCTCAGATTACAATATT 332267 Query 178104 CAAAAAGAATCAACACTGCATCTTGTT 178130 || || ||||| || || || || ||| Sbjct 332266 CAGAAGGAATCCACCCTTCACCTCGTT 332240 Score = 123 bits (136), Expect = 6e-23 Identities = 151/205 (74%), Gaps = 1/205 (0%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || ||||| || || || ||||| || || || ||||| | || |||||| || ||| Sbjct 332218 CAGATTTTTGTCAAGACCCTCACGGGTAAGACCATCACGTTGGAAGTGGAATCATCCGAC 332159 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 |||||||| ||||| || || || || ||||| ||||| || || || || |||||| Sbjct 332158 ACCATCGACAACGTGAAGGCGAAAATCCAAGACAAGGAAGGCATTCCCCCTGATCAGCAA 332099 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || |||||||| || ||||| ||| | ||||| || | || ||| | ||||| ||| || Sbjct 332098 CGCCTTATCTTTGCTGGAAAGCAGTTGGAAGACGGTCGCACGCTTTCGGATTACAACATC 332039 Query 178104 CAAAAAGAATCAACACTGCATCTTG 178128 || || || || || || || |||| Sbjct 332038 CAGAAGGAGTCTACGCTTCA-CTTG 332015 Score = 86.0 bits (94), Expect = 2e-11 Identities = 83/107 (78%), Gaps = 0/107 (0%) Strand=Plus/Minus Query 178026 ATCCCTCCGGACCAGCAACGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACT 178085 || ||||| ||||||||||| || |||||||| ||||| ||||| |||||||| | || Sbjct 332572 ATTCCTCCCGACCAGCAACGTCTCATCTTCGCTGGAAAGCAGCTTGAAGATGGCCGCACG 332513 Query 178086 CTTGCCGATTATAACGTCCAAAAAGAATCAACACTGCATCTTGTTTT 178132 || | ||||| ||| |||| || ||||| || || || || || || Sbjct 332512 CTATCGGATTACAACATCCAGAAGGAATCTACCCTTCACCTGGTCTT 332466 >seq34 Length=318726 Score = 91.5 bits (100), Expect = 4e-13 Identities = 83/105 (79%), Gaps = 0/105 (0%) Strand=Plus/Plus Query 177958 TCACCCTCGAGGTGGAAAGCTCAGACACCATCGAGAACGTCAAACAAAAGATTCAGGACA 178017 |||| | ||||||||| || ||||||||||| ||||| || |||||| ||||||| Sbjct 239113 TCACGTTGGAGGTGGAATCATCGGACACCATCGACAACGTGAAGGCAAAGATCCAGGACA 239172 Query 178018 AAGAAGGAATCCCTCCGGACCAGCAACGACTTATCTTCGCCGGAA 178062 | ||||| || ||||| ||||| || || || |||||||| |||| Sbjct 239173 AGGAAGGCATTCCTCCTGACCAACAGCGCCTCATCTTCGCTGGAA 239217 >seq39 Length=270505 Score = 89.7 bits (98), Expect = 1e-12 Identities = 108/147 (73%), Gaps = 0/147 (0%) Strand=Plus/Plus Query 177996 GTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAACGACTTATCTTC 178055 |||||| ||||||||| ||||| |||||||| || |||||||||||||| || ||||| Sbjct 5844 GTCAAATCAAAGATTCAAGACAAGGAAGGAATTCCACCGGACCAGCAACGGCTCGTCTTC 5903 Query 178056 GCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTCCAAAAAGAATCA 178115 || ||||| ||| ||||||| | | ||| | || || || | ||||| || || Sbjct 5904 GCTGGAAACACGCTTGAAGATGACCGCAAGCTTTCGGACTACAATATTCAAAAGGAGTCG 5963 Query 178116 ACACTGCATCTTGTTTTGAGACTCAGA 178142 || | ||| | | ||||| || ||| Sbjct 5964 ACGATTCATTTAATCTTGAGGCTGAGA 5990 >seq35 Length=287174 Score = 84.2 bits (92), Expect = 5e-11 Identities = 79/101 (78%), Gaps = 0/101 (0%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || || ||||| || || |||||||| || || ||||||||||||||||| || ||| Sbjct 76596 CAGATCTTCGTCAAGACCCTCACAGGGAAGACTATCACCCTCGAGGTGGAGTCTTCTGAC 76537 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGG 178024 |||||||| ||||| || ||| |||||||| || || || Sbjct 76536 ACCATCGACAACGTTAAGGCAAAAATTCAGGATAAGGAGGG 76496 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1203707294650700