Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Taiwanofungus_20camphoratus_20[genbank_20GCA_5F000766995.1_202014- 10-15] 360 sequences; 32,155,604 total letters Query= NC_001132.2 Length=161773 Score E Sequences producing significant alignments: (Bits) Value seq1 147 2e-30 seq306 134 1e-26 >seq1 Length=2218769 Score = 147 bits (162), Expect = 2e-30 Identities = 284/419 (68%), Gaps = 0/419 (0%) Strand=Plus/Plus Query 16956 ACATCAGACATGCGAAATCGCAATGTAATCCCTCGTCTCTGCTGATAAGTTCGTTAGAAA 17015 ||| ||| || || ||||| ||| | ||||||||| | | | || || || || || | Sbjct 2182041 ACAACAGGCACGCAAAATCAGTATGCATTCCCTCGTCGCGGATAATCAGCTCATTGGAGA 2182100 Query 17016 ATGTCAACCCGGGCATCTTTCCTCGTTTCTTTAACCAAAATATCGCGGCGAACGACCCAG 17075 | |||| || ||||| || | |||||| | ||| ||||| | || || || || | Sbjct 2182101 ACGTCAGGCCAGGCATGAGACCCCTTTTCTTGAGCCAGAATATGGATGCAAAGGAGCCGG 2182160 Query 17076 AAAAGAATATACCCTCGACGGATGCAAACGCGATTAATCGTTCGGCGTACGTCGCGTCTT 17135 | |||||||| || ||||| | || || |||| | || || ||| |||| | || | Sbjct 2182161 AGAAGAATATGCCTTCGACAGCCGCGAAAGCGACAAGCCGCTCCGCGAACGTGGATTCCT 2182220 Query 17136 TGTTACGAATCCATTTCTGCACCCACTCGGCTTTTTGCTTTATGCAATCCATCGTTTCTA 17195 ||| | ||||||| | | |||| || || |||| || || || || || || | Sbjct 2182221 TGTCAGAAATCCATCGCAGTGCCCAGTCAGCCTTTTTTTTAATACATGGGATGGTCTCGA 2182280 Query 17196 TGGCCTTAAATAATTTCTCTTTTTCCTGTAGGTCGATTATATACGTATCGATGAGTAGGC 17255 | || | || || | || || ||| |||| | || || || || ||||| || Sbjct 2182281 TCGCATCGAACAAATGGTCCCGTTGTTGTTGGTCCTTGATGTATGTGTCAATGAGCAGAG 2182340 Query 17256 TGTACATTTCGGAGTGTATGTTCTCCATGGCTATCTGAAATCCGTAAAAGCATCGGGCTT 17315 ||| | ||||| || ||||||||||| ||||| || ||||||||||| || || | Sbjct 2182341 AGTATGTCTCGGAATGAATGTTCTCCATCATAATCTGGAAGCCGTAAAAGCAGCGCGCCT 2182400 Query 17316 CCGCTATTTGAACTTCCACGTAGAATCGTTCCGCTAGATTTTCGTTCACGATGCCGTCG 17374 | || | ||| ||||| | || || ||| | ||||| |||||||| ||||| ||| Sbjct 2182401 CAGCGACTTGCACTTCGTTTGAAAAGCGCTCCACGAGATTCTCGTTCACAATGCCATCG 2182459 Score = 122 bits (134), Expect = 9e-23 Identities = 286/429 (67%), Gaps = 2/429 (0%) Strand=Plus/Minus Query 16964 CATGCGAAATCGCAATGTAATCCCTCGTCTCTGCTGATAAGTTCGTTAGAAAATGTCAAC 17023 ||||| || ||| ||| | |||||||| | ||||||||| || || || || || | Sbjct 2184297 CATGCAAAGTCGGTATGCATACCCTCGTCACGGCTGATAAGCTCATTTGAGAACGTGAGA 2184238 Query 17024 CCGGGCATCTTTCCTCGTTTCTTTAACCAAAATATCGCGGCGAACGACCCAGAAAAGAAT 17083 || |||||| |||| ||||| | ||| || |||| ||| || || || |||||||| Sbjct 2184237 CCAGGCATCAAGCCTCTCTTCTTCAGCCAGAAAATCGAGGCAAAAGATCCTGAAAAGAAG 2184178 Query 17084 ATACCCTCGACGGATGCAAACGCGATTAATCGTTCGGCGTACGTCGCGTCTTTGTTACGA 17143 |||||||| || | || || || | | || || ||| ||| | | | || | ||| Sbjct 2184177 ATACCCTCAACAGCAGCGAAGGCAACGAGCCGCTCAGCGAACGCAGATT-TCTGGTCCGA 2184119 Query 17144 -ATCCATTTCTGCACCCACTCGGCTTTTTGCTTTATGCAATCCATCGTTTCTATGGCCTT 17202 ||||| | || |||| || || || | ||| ||||| || || || || || | Sbjct 2184118 GATCCACCGCAGCGCCCAGTCAGCCTTCTTCTTGATGCATGGAATAGTGTCAATAGCATC 2184059 Query 17203 AAATAATTTCTCTTTTTCCTGTAGGTCGATTATATACGTATCGATGAGTAGGCTGTACAT 17262 || | | ||| | | |||| | || || || ||||| || || ||| | Sbjct 2184058 GAAAAGGTGCTCCCGCTGCGCAGGGTCCTTGATGTAAGTGTCGATAAGAAGAGAGTATGT 2183999 Query 17263 TTCGGAGTGTATGTTCTCCATGGCTATCTGAAATCCGTAAAAGCATCGGGCTTCCGCTAT 17322 || ||||| ||||||||||| || || || ||||| ||||| ||||| || || | Sbjct 2183998 CTCAGAGTGAATGTTCTCCATCATGATTTGGAAACCGTAGAAGCAGCGGGCCTCGGCAAC 2183939 Query 17323 TTGAACTTCCACGTAGAATCGTTCCGCTAGATTTTCGTTCACGATGCCGTCGCTCGCGGC 17382 || ||||| ||||||| || | || || || || |||||||| || ||| || Sbjct 2183938 CTGCACTTCATTCGAGAATCGCTCAACAAGGTTCTCATTGACGATGCCATCCGACGCAGC 2183879 Query 17383 GAAAAACGC 17391 || || || Sbjct 2183878 AAAGAAAGC 2183870 >seq306 Length=1616116 Score = 134 bits (148), Expect = 1e-26 Identities = 360/542 (66%), Gaps = 15/542 (3%) Strand=Plus/Plus Query 16985 CCCTCGTCTCTGCTGATAAGTTCGTTAGAAAATGTCAACCCGGGCATCTTTCCTCGTTTC 17044 ||||| || | || || || || || || || |||| || |||||| || || ||| Sbjct 904172 CCCTCATCACGACTTATCAGCTCATTCGAGAACGTCAGACCAGGCATCAGGCCACGCTTC 904231 Query 17045 TTTAACCAAAATATCGCGGCGAACGACCCAGAAAAGAATATACCCTCGACGGATGCAAAC 17104 || | ||| || || | || || |||||||| ||||| || ||||| || | ||||| Sbjct 904232 TTGAGCCAGAAAATGGACGCAAAGGACCCAGAGAAGAAAATGCCCTCTACTGCAGCAAAG 904291 Query 17105 GCGATTAATCGTTCGGCGTACGTCG-CGTCTTTGTTACGAA-TCCATTTCTGCA---CCC 17159 || | | ||| || || | || | | |||| | |||| |||| | ||| ||| Sbjct 904292 GCAACGAGTCGCTCAGCAAATGTAGACTTCTTA--TCCGAAATCCA---CCGCAATGCCC 904346 Query 17160 ACTCGGCTTTTTGCTTTATGCAATCCATCGTTTCTATGGCCTTAAATAATTTCTCTTTTT 17219 | || || || | ||| || ||| || || || ||||| | ||| | | ||| | Sbjct 904347 AGTCAGCCTTCTTCTTGATACAAGGGATGGTGTCAATGGCGTCAAAGAGATGTTCTCGCT 904406 Query 17220 CCTGTAGGTCGATTATATACGTATCGATGAGTAGGCTGTACATTTCGGAGTGTATGTTCT 17279 ||| |||| | || || ||||||||||| ||| ||| | |||||||| ||||||| Sbjct 904407 GCTGAGGGTCCTTGATGTAAGTATCGATGAGAAGGGAGTATGTCTCGGAGTGAATGTTCT 904466 Query 17280 CCATGGCTATCTGAAATCCGTAAAAGCATCGGGCTTCCGCTATTTGAACTTCCACGTAGA 17339 |||| ||||| || || || |||||||| ||||| || || || || | ||| Sbjct 904467 CCATCATGATCTGGAAGCCATAGAAGCATCGCGCTTCTGCAGCCTGTACCTCATTGGAGA 904526 Query 17340 ATCGTTCCGCTAGATTTTCGTTCACGATGCCGTCGCTCGCGGCGAAAAACGCCAATATAT 17399 | || || | ||||| ||||| || ||||| || ||| || || ||||| | | || Sbjct 904527 ACCGCTCAACGAGATTCTCGTTGACAATGCCATCCGACGCAGCAAAGAACGCGAGAACAT 904586 Query 17400 GCTTAATGAAATATTTTTCGTCCG--GTGTAA--GAACGCGCCAGTCCTTTAAATCTTTG 17455 || || ||| | | | ||| ||| || || | | |||||| | | || || Sbjct 904587 GCGAAAGGAAGTGTCTCTCG-CCGTCGTTCAAGCGGTTGTTCCAGTCATGCAGGTCCTTC 904645 Query 17456 GATATATCCACTTCTTCGGGGGTCCAAAAACTAGCCACTGCCTTTTTATACATATTCCAA 17515 |||| || | || || ||||| ||| |||| | ||||| |||||||| | ||| Sbjct 904646 GATAGGTCAATCTCCTCCATCGTCCAGAAAGAAGCCTCGGCCTTCTTATACATCTGCCAG 904705 Query 17516 AT 17517 || Sbjct 904706 AT 904707 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 517543271044800