Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Taiwanofungus_20camphoratus_20[genbank_20GCA_5F000766995.1_202014- 10-15] 360 sequences; 32,155,604 total letters Query= NC_001266.1 Length=159857 Score E Sequences producing significant alignments: (Bits) Value seq1 113 5e-20 seq306 107 2e-18 >seq1 Length=2218769 Score = 113 bits (124), Expect = 5e-20 Identities = 284/429 (66%), Gaps = 2/429 (0%) Strand=Plus/Minus Query 16202 CACGCGAAGTCGCAATGTAGTCCTTCGTCTCTGCTGATAAGTTCGTTGGAAAAAGTTAAC 16261 || || |||||| ||| | || ||||| | ||||||||| || || || || || | Sbjct 2184297 CATGCAAAGTCGGTATGCATACCCTCGTCACGGCTGATAAGCTCATTTGAGAACGTGAGA 2184238 Query 16262 CCTGGCATTTTTCCTCGTTTCTTTAACCAGAATATCGCAGCAAATGACCCCGAAAAGAAT 16321 || ||||| |||| ||||| | |||||| |||| ||||| || || |||||||| Sbjct 2184237 CCAGGCATCAAGCCTCTCTTCTTCAGCCAGAAAATCGAGGCAAAAGATCCTGAAAAGAAG 2184178 Query 16322 ATACCCTCAACAGATGCAAAAGCGATTAATCGTTCCGCGTACGTAGCATCTTTATTACGA 16381 ||||||||||||| || || || | | || || ||| ||| || || | | | ||| Sbjct 2184177 ATACCCTCAACAGCAGCGAAGGCAACGAGCCGCTCAGCGAACGCAG-ATTTCTGGTCCGA 2184119 Query 16382 -ATCCATTTCTGTACCCATTCGGCTTTTTGTTTTATACAATCCATCGTTTCTATGGCCTT 16440 ||||| | | |||| || || || | || || || || || || || || | Sbjct 2184118 GATCCACCGCAGCGCCCAGTCAGCCTTCTTCTTGATGCATGGAATAGTGTCAATAGCATC 2184059 Query 16441 AAACAATTTCTCTTTTTCCTGAATATCGATTATATACGTATCAATCAGTAAACTGTACAT 16500 || | | ||| | | | || | || || || || || || | | ||| | Sbjct 2184058 GAAAAGGTGCTCCCGCTGCGCAGGGTCCTTGATGTAAGTGTCGATAAGAAGAGAGTATGT 2183999 Query 16501 TTCTGAGTGTATGTTCTCTATGGCTATCTGAAATCCATAGAAGCATCGAGCCTCCGCTAT 16560 || ||||| |||||||| || || || || || |||||||| || ||||| || | Sbjct 2183998 CTCAGAGTGAATGTTCTCCATCATGATTTGGAAACCGTAGAAGCAGCGGGCCTCGGCAAC 2183939 Query 16561 TTGTACTTCCACGTAAAATCGTTCCGCCAGGTTCTCATTCACGATACCGTCACTTGCAGC 16620 || ||||| | ||||| || | ||||||||||| ||||| || || ||||| Sbjct 2183938 CTGCACTTCATTCGAGAATCGCTCAACAAGGTTCTCATTGACGATGCCATCCGACGCAGC 2183879 Query 16621 AAAAAACGC 16629 ||| || || Sbjct 2183878 AAAGAAAGC 2183870 >seq306 Length=1616116 Score = 107 bits (118), Expect = 2e-18 Identities = 281/429 (66%), Gaps = 0/429 (0%) Strand=Plus/Plus Query 16201 ACACGCGAAGTCGCAATGTAGTCCTTCGTCTCTGCTGATAAGTTCGTTGGAAAAAGTTAA 16260 |||||| |||||| || | || || || | || || || || || || || || | Sbjct 904150 ACACGCAAAGTCGGTGTGCATGCCCTCATCACGACTTATCAGCTCATTCGAGAACGTCAG 904209 Query 16261 CCCTGGCATTTTTCCTCGTTTCTTTAACCAGAATATCGCAGCAAATGACCCCGAAAAGAA 16320 || ||||| || || ||||| | |||||| || | ||||| ||||| || ||||| Sbjct 904210 ACCAGGCATCAGGCCACGCTTCTTGAGCCAGAAAATGGACGCAAAGGACCCAGAGAAGAA 904269 Query 16321 TATACCCTCAACAGATGCAAAAGCGATTAATCGTTCCGCGTACGTAGCATCTTTATTACG 16380 || ||||| || | ||||| || | | ||| || || | |||| | |||| Sbjct 904270 AATGCCCTCTACTGCAGCAAAGGCAACGAGTCGCTCAGCAAATGTAGACTTCTTATCCGA 904329 Query 16381 AATCCATTTCTGTACCCATTCGGCTTTTTGTTTTATACAATCCATCGTTTCTATGGCCTT 16440 |||||| | | |||| || || || | || |||||| || || || ||||| | Sbjct 904330 AATCCACCGCAATGCCCAGTCAGCCTTCTTCTTGATACAAGGGATGGTGTCAATGGCGTC 904389 Query 16441 AAACAATTTCTCTTTTTCCTGAATATCGATTATATACGTATCAATCAGTAAACTGTACAT 16500 ||| | | ||| | |||| || | || || ||||| || || | ||| | Sbjct 904390 AAAGAGATGTTCTCGCTGCTGAGGGTCCTTGATGTAAGTATCGATGAGAAGGGAGTATGT 904449 Query 16501 TTCTGAGTGTATGTTCTCTATGGCTATCTGAAATCCATAGAAGCATCGAGCCTCCGCTAT 16560 || ||||| |||||||| || ||||| || |||||||||||||| || || || Sbjct 904450 CTCGGAGTGAATGTTCTCCATCATGATCTGGAAGCCATAGAAGCATCGCGCTTCTGCAGC 904509 Query 16561 TTGTACTTCCACGTAAAATCGTTCCGCCAGGTTCTCATTCACGATACCGTCACTTGCAGC 16620 ||||| || | | || || || | || ||||| || || || || || ||||| Sbjct 904510 CTGTACCTCATTGGAGAACCGCTCAACGAGATTCTCGTTGACAATGCCATCCGACGCAGC 904569 Query 16621 AAAAAACGC 16629 ||| ||||| Sbjct 904570 AAAGAACGC 904578 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 511412098635200