Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Taiwanofungus_20camphoratus_20[genbank_20GCA_5F000766995.1_202014- 10-15] 360 sequences; 32,155,604 total letters Query= NC_002331.1 Length=178733 Score E Sequences producing significant alignments: (Bits) Value seq328 123 3e-23 seq223 111 2e-19 >seq328 Length=1291088 Score = 123 bits (136), Expect = 3e-23 Identities = 159/217 (73%), Gaps = 2/217 (1%) Strand=Plus/Minus Query 42968 ACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTC 43027 ||| | ||| | ||| | ||||||||||| ||||| |||||||||| ||||| || | Sbjct 623157 ACGGAGCACGAGATGGAGGGTGCTCTCCTTCTGAATGTTGTAATCAGAAAGAGTGCGGCC 623098 Query 43028 GTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTT 43087 ||| || |||||||| || ||||| || || ||||||||||| | || | | |||||| Sbjct 623097 GTCTTCCAGCTGCTTGCCGGCGAAGATCAGACGCTGCTGGTCAGGAGGGATACCCTCCTT 623038 Query 43088 GTCCATGATTTTTTG-TTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCGACCGTGA 43146 || | ||| | || | ||||| | | | ||||| ||||||||| || | |||| Sbjct 623037 GT-CTTGAATCTTCGCTTTGACATTGTCGATGGTGTCAGACGATTCCACCTCAAGGGTGA 622979 Query 43147 TGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 43183 | || || ||||| | |||||| || || || ||||| Sbjct 622978 TAGTCTTCCCCGTCAACGTCTTCACGAAAATCTGCAT 622942 Score = 118 bits (130), Expect = 1e-21 Identities = 148/203 (73%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 42981 TGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGC 43040 |||| ||||||||||| ||||||||||| || | ||||| || |||| || | ||| Sbjct 622306 TGCAGAGTGCTCTCCTTCTGAATATTGTAGTCGGAAAGAGTGCGGCCGTCCTCCAACTGT 622247 Query 43041 TTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTT 43100 || |||||||| || || |||||||| |||| || | || ||||||||| ||| || Sbjct 622246 TTGCCAGCGAAGATAAGACGCTGCTGATCGGGAGGAATGCCCTCCTTGTCTTGGATCTTC 622187 Query 43101 TGTTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTT 43160 || | | | | ||||| || ||||| |||| |||||| || |||||||| Sbjct 622186 GCCTTCACGTTATCGATGGTGTCAGAAGACTCCACCTCGAGCGTGATAGTCTTGCCCGTA 622127 Query 43161 AGCGTCTTTACAAAGATTTGCAT 43183 || ||||| || ||||| ||||| Sbjct 622126 AGGGTCTTGACGAAGATCTGCAT 622104 Score = 98.7 bits (108), Expect = 1e-15 Identities = 142/198 (72%), Gaps = 2/198 (1%) Strand=Plus/Minus Query 42987 GTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCA 43046 || |||||||| || || ||||| || | || || || | || || |||||||| ||| Sbjct 622857 GTACTCTCCTTCTGGATGTTGTAGTCCGAGAGTGTACGACCATCCTCCAGCTGCTTGCCA 622798 Query 43047 GCGAATATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTTG 43106 ||||| || || ||||||||||| | || | | |||||||| | ||| | || | | Sbjct 622797 GCGAAGATCAGGCGCTGCTGGTCAGGAGGAATACCCTCCTTGT-CTTGAATCTTCGCCTT 622739 Query 43107 AGCGTCG-CCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGT 43165 | ||| | | | || || ||||| || |||| ||||| || |||||||| || || Sbjct 622738 AACGTTGTCGATGGTATCAGATGATTCGACCTCGAGAGTGATCGTCTTGCCCGTAAGAGT 622679 Query 43166 CTTTACAAAGATTTGCAT 43183 ||| || ||||| ||||| Sbjct 622678 CTTGACGAAGATCTGCAT 622661 Score = 87.8 bits (96), Expect = 2e-12 Identities = 91/118 (77%), Gaps = 1/118 (1%) Strand=Plus/Minus Query 42975 ACCAA-ATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATC 43033 ||||| ||| | |||||||||||| ||||||||||| |||| ||||| || |||| || Sbjct 622591 ACCAAGATGGAGTGTGCTCTCCTTCTGAATATTGTAGTCAGAGAGAGTACGGCCGTCCTC 622532 Query 43034 TAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCC 43091 |||||||| || ||||| || | || || || || | ||| | || ||||||||| Sbjct 622531 CAGCTGCTTGCCGGCGAAGATCAAACGTTGTTGATCAGGCGGGATGCCTTCCTTGTCC 622474 >seq223 Length=1670925 Score = 111 bits (122), Expect = 2e-19 Identities = 142/193 (74%), Gaps = 2/193 (1%) Strand=Plus/Plus Query 42992 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 43051 |||||| |||||||||||||| | || || | |||| || |||||||| |||||||| Sbjct 1064405 CTCCTTCTGAATATTGTAATCCGAGAGCGTTCTACCGTCCTCGAGCTGCTTGCCAGCGAA 1064464 Query 43052 TATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTG-TTTGAGCG 43110 || | ||||| ||||| | ||| | || ||||| ||| ||| | |||| || | Sbjct 1064465 GATCAAGCGCTGTTGGTCTGGCGGAATGCCTTCCTTATCC-TGAATCTTTGCCTTCACGT 1064523 Query 43111 TCGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTA 43170 | | | |||||| || || || || | ||||||||| ||||| || |||||||| | Sbjct 1064524 TATCGATCGTGTCTGATGACTCGACCTCCAACGTGATGGTCTTGCCGGTAAGCGTCTTCA 1064583 Query 43171 CAAAGATTTGCAT 43183 |||| |||||||| Sbjct 1064584 CAAAAATTTGCAT 1064596 Score = 96.9 bits (106), Expect = 4e-15 Identities = 138/192 (72%), Gaps = 2/192 (1%) Strand=Plus/Plus Query 42993 TCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAAT 43052 ||||| |||||||||||||||| ||| ||||| | || || || ||||| ||||| || Sbjct 1064915 TCCTTCTGAATATTGTAATCAGACAGCGTCCGGCCATCCTCAAGTTGCTTTCCAGCAAAG 1064974 Query 43053 ATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTG-TTTGAGCGT 43111 || || || ||||| || | || | | |||||||||| ||| | |||| ||| | | Sbjct 1064975 ATCAGACGTTGCTGATCTGGAGGGATACCCTCCTTGTCC-TGAATCTTTGCTTTCACGTT 1065033 Query 43112 CGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTAC 43171 | | ||||| ||| || || || | || || || ||||| || || ||||| || Sbjct 1065034 ATCGATAGTGTCCGACGACTCAACCTCAAGTGTAATCGTCTTGCCAGTGAGAGTCTTCAC 1065093 Query 43172 AAAGATTTGCAT 43183 ||| || ||||| Sbjct 1065094 AAAAATCTGCAT 1065105 Score = 82.4 bits (90), Expect = 9e-11 Identities = 139/199 (70%), Gaps = 2/199 (1%) Strand=Plus/Plus Query 42987 GTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCA 43046 ||||||||||| |||||||| ||||| | || || | | || || | ||| || || Sbjct 1064172 GTGCTCTCCTTCTGAATATTATAATCCGAGAGCGTTCTGCCATCCTCCAACTGTTTCCCC 1064231 Query 43047 GCGAATATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTG-TTT 43105 ||||| || | || |||||||| | || | | |||||| ||| ||| | || | || Sbjct 1064232 GCGAAGATCAAGCGTTGCTGGTCAGGAGGGATACCCTCCTTATCC-TGAATCTTCGCCTT 1064290 Query 43106 GAGCGTCGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGT 43165 | | | | |||||| || ||||| || | ||||| || |||||||| || || Sbjct 1064291 CACATTGTCGATCGTGTCTGATGACTCCACTTCCAATGTGATAGTCTTGCCCGTAAGTGT 1064350 Query 43166 CTTTACAAAGATTTGCATT 43184 || ||||| ||||||||| Sbjct 1064351 TTTCACAAAAATTTGCATT 1064369 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 571815026820800