Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Taiwanofungus_20camphoratus_20[genbank_20GCA_5F000766995.1_202014- 10-15] 360 sequences; 32,155,604 total letters Query= NC_003027.1 Length=150773 Score E Sequences producing significant alignments: (Bits) Value seq306 123 2e-23 seq1 105 6e-18 >seq306 Length=1616116 Score = 123 bits (136), Expect = 2e-23 Identities = 256/379 (68%), Gaps = 4/379 (1%) Strand=Plus/Plus Query 14195 AAAATTAAACACGCAAAATCACAATGAAGGCCCTCATCTCTACTAATAAGTTCGTTTGAA 14254 |||| ||||||||||| || || | ||||||||| | ||| || || || || || Sbjct 904142 AAAAGCAAACACGCAAAGTCGGTGTGCATGCCCTCATCACGACTTATCAGCTCATTCGAG 904201 Query 14255 AATGTTAATCCTGGCATCAATCCTCGtttttttAACCAAAATATTGCAGCGAATGATCCG 14314 || || | || ||||||| || || || || | ||| || || | || || || || Sbjct 904202 AACGTCAGACCAGGCATCAGGCCACGCTTCTTGAGCCAGAAAATGGACGCAAAGGACCCA 904261 Query 14315 GAAAAGAATATTCCCTCAACTGCAGCAAACGCTATTAATCGTTCTCCAAACGATGCTTTT 14374 || ||||| || ||||| ||||||||||| || | | ||| || |||| | | || Sbjct 904262 GAGAAGAAAATGCCCTCTACTGCAGCAAAGGCAACGAGTCGCTCAGCAAATGTAGACTTC 904321 Query 14375 TTGTTCGATATCCATTTTCTAGCCCATTCAGAtttttttttAATAAAATCCATTGTTTCA 14434 || | ||| ||||| ||||| |||| || || || ||| || || || ||| Sbjct 904322 TTATCCGAAATCCACCGCAATGCCCAGTCAGCCTTCTTCTTGATACAAGGGATGGTGTCA 904381 Query 14435 ATAGCATTAAATAAATGTTCCTTCTCTTTA--GTACTTGAAATGTATGTATCAATAAGTA 14492 || || | ||| | |||||| || | | || |||| ||||| ||||| || || | Sbjct 904382 ATGGCGTCAAAGAGATGTTCTCGCTGCTGAGGGTCCTTG--ATGTAAGTATCGATGAGAA 904439 Query 14493 AGCTATACATTTCAGAGTGTATGTTTTCCATAGCTATCTGAAAACCATAAAAACATCTAG 14552 | || | || ||||| ||||| ||||| ||||| || ||||| || |||| | Sbjct 904440 GGGAGTATGTCTCGGAGTGAATGTTCTCCATCATGATCTGGAAGCCATAGAAGCATCGCG 904499 Query 14553 CTTCTGACCATTGTACCTC 14571 |||||| |||||||| Sbjct 904500 CTTCTGCAGCCTGTACCTC 904518 >seq1 Length=2218769 Score = 105 bits (116), Expect = 6e-18 Identities = 232/346 (67%), Gaps = 4/346 (1%) Strand=Plus/Plus Query 14204 CACGCAAAATCACAATGAAGGCCCTCATCTCTACTAATAAGTTCGTTTGAAAATGTTAAT 14263 |||||||||||| ||| | ||||| || | |||| || || || || || || | Sbjct 2182049 CACGCAAAATCAGTATGCATTCCCTCGTCGCGGATAATCAGCTCATTGGAGAACGTCAGG 2182108 Query 14264 CCTGGCATCAATCCTCGtttttttAACCAAAATATTGCAGCGAATGATCCGGAAAAGAAT 14323 || ||||| | || | ||| || | ||| ||||| | || || || ||||| |||||| Sbjct 2182109 CCAGGCATGAGACCCCTTTTCTTGAGCCAGAATATGGATGCAAAGGAGCCGGAGAAGAAT 2182168 Query 14324 ATTCCCTCAACTGCAGCAAACGCTATTAATCGTTCTCCAAACGATGCTTTTTTGTTCGAT 14383 || || || || || || || || | | || || | |||| | || |||| || Sbjct 2182169 ATGCCTTCGACAGCCGCGAAAGCGACAAGCCGCTCCGCGAACGTGGATTCCTTGTCAGAA 2182228 Query 14384 ATCCATTTTCTAGCCCATTCAGAtttttttttAATAAAATCCATTGTTTCAATAGCATTA 14443 |||||| ||||| |||| |||||||||||| | || || || || |||| Sbjct 2182229 ATCCATCGCAGTGCCCAGTCAGCCTTTTTTTTAATACATGGGATGGTCTCGATCGCATCG 2182288 Query 14444 AATAAATGTTCC--TTCTCTTTAGTACTTGAAATGTATGTATCAATAAGTAAGCTATACA 14501 || ||||| ||| || | || || |||| |||||||| ||||| || | || Sbjct 2182289 AACAAATGGTCCCGTTGTTGTTGGTCCTTG--ATGTATGTGTCAATGAGCAGAGAGTATG 2182346 Query 14502 TTTCAGAGTGTATGTTTTCCATAGCTATCTGAAAACCATAAAAACA 14547 | || || || ||||| ||||| ||||| || || ||||| || Sbjct 2182347 TCTCGGAATGAATGTTCTCCATCATAATCTGGAAGCCGTAAAAGCA 2182392 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 482343429444800