Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Taiwanofungus_20camphoratus_20[genbank_20GCA_5F000766995.1_202014- 10-15] 360 sequences; 32,155,604 total letters Query= NC_003391.1 Length=205719 Score E Sequences producing significant alignments: (Bits) Value seq306 163 4e-35 seq1 111 2e-19 >seq306 Length=1616116 Score = 163 bits (180), Expect = 4e-35 Identities = 377/563 (67%), Gaps = 10/563 (2%) Strand=Plus/Plus Query 36154 CAAACATGCGAAATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGAAAACGT 36213 |||||| || || ||| ||| | ||||| || | ||| || | || || || ||||| Sbjct 904147 CAAACACGCAAAGTCGGTGTGCATGCCCTCATCACGACTTATCAGCTCATTCGAGAACGT 904206 Query 36214 GAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGATCCAGAAAA 36273 || || ||||| ||||||||||| || ||||| || ||||||||||| || ||||| || Sbjct 904207 CAGACCAGGCATCAGGCCACGCTTCTTGAGCCAGAAAATGGACGCAAAGGACCCAGAGAA 904266 Query 36274 GAAAATTCCTTCTACTGCCGCAAAGGCAATAAGTCTCTCTCCATAACCGGCACTGTCATG 36333 |||||| || |||||||| |||||||||| |||| ||| || || ||| || | Sbjct 904267 GAAAATGCCCTCTACTGCAGCAAAGGCAACGAGTCGCTCAGCA-AATGTAGACT-TCTTA 904324 Query 36334 T-----ATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATTGTCTCTATA 36388 | |||||| ||||| || |||||||| || | |||||| || || || || Sbjct 904325 TCCGAAATCCACCGCAATGCCCAGTCAGCCTTCTTCTTGATACAAGGGATGGTGTCAATG 904384 Query 36389 GCATTAAAGAGATAGtttttttCATTACTATCTTTAACATATGTATCAATCAAAAGACTA 36448 || | |||||||| | | | | | || || | || ||||| || | ||| Sbjct 904385 GCGTCAAAGAGATGTTCTCGCTGCTGAGGGTCCTTGATGTAAGTATCGATGAGAAGGGAG 904444 Query 36449 TACATTTCCGAATGAATGTTTTCAATGGCCATTTGAAATCCGTAGAAACATCTAGCCTCG 36508 || | || || |||||||| || || || || || || ||||| |||| || || Sbjct 904445 TATGTCTCGGAGTGAATGTTCTCCATCATGATCTGGAAGCCATAGAAGCATCGCGCTTCT 904504 Query 36509 GTAATCTGTACTTCTGTACAAAATCGTTCTGCTAAATTTTCATTCACTATTCCGTCACTG 36568 | | |||||| || | | || || || | | ||| || || || || || || Sbjct 904505 GCAGCCTGTACCTCATTGGAGAACCGCTCAACGAGATTCTCGTTGACAATGCCATCCGAC 904564 Query 36569 GCTGCAAAAAACGCCAATACATGTTTTATAAAATATTTTTCG-TTTGGTGTTA--GTTTA 36625 || ||||| ||||| | ||||| | || | | | ||| | || | | || Sbjct 904565 GCAGCAAAGAACGCGAGAACATGCGAAAGGAAGTGTCTCTCGCCGTCGTTCAAGCGGTTG 904624 Query 36626 TTCCAATCATTGATATCTTTAGATATATCCACTTCTTCCACTGTCCAAAATGATGCCTCT 36685 ||||| |||| | || || |||| || | || |||| ||||| || || ||||| Sbjct 904625 TTCCAGTCATGCAGGTCCTTCGATAGGTCAATCTCCTCCATCGTCCAGAAAGAAGCCTCG 904684 Query 36686 GCCTTTTTATACATATTCCAGAT 36708 ||||| |||||||| | |||||| Sbjct 904685 GCCTTCTTATACATCTGCCAGAT 904707 >seq1 Length=2218769 Score = 111 bits (122), Expect = 2e-19 Identities = 347/536 (65%), Gaps = 6/536 (1%) Strand=Plus/Plus Query 36179 CCCTCGTCTCTACTAATTAATTCGTTGGAAAACGTGAGTCCGGGCATTAGGCCACGCTTT 36238 |||||||| | |||| | || ||||| ||||| || || ||||| || || | || Sbjct 2182070 CCCTCGTCGCGGATAATCAGCTCATTGGAGAACGTCAGGCCAGGCATGAGACCCCTTTTC 2182129 Query 36239 TTAAGCCAAAATATGGACGCAAATGATCCAGAAAAGAAAATTCCTTCTACTGCCGCAAAG 36298 || ||||| |||||||| ||||| || || || ||||| || ||||| || ||||| || Sbjct 2182130 TTGAGCCAGAATATGGATGCAAAGGAGCCGGAGAAGAATATGCCTTCGACAGCCGCGAAA 2182189 Query 36299 GCAATAAGTCTCTCTCCATAACCGG---CACTGTCATGTATCCACTTTTGAGCCCAATCG 36355 || | ||| | ||| | | || | ||||| ||||| | ||||| || Sbjct 2182190 GCGACAAGCCGCTCCGCGAACGTGGATTCCTTGTCAGAAATCCATCGCAGTGCCCAGTCA 2182249 Query 36356 GCCTTCTTTTTTACACAAGGCATTGTCTCTATAGCATTAAAGAGATAGtttttttCATTA 36415 ||||| ||||| | ||| || || ||||| || |||| || | || || || | Sbjct 2182250 GCCTTTTTTTTAATACATGGGATGGTCTCGATCGCATCGAACAAATGGTCCCGTTGTTGT 2182309 Query 36416 CTATCTTTAACATATGTATCAATCAAAAGACTATACATTTCCGAATGAATGTTTTCAATG 36475 || || | ||||| ||||| | ||| || | || ||||||||||| || || Sbjct 2182310 TGGTCCTTGATGTATGTGTCAATGAGCAGAGAGTATGTCTCGGAATGAATGTTCTCCATC 2182369 Query 36476 GCCATTTGAAATCCGTAGAAACATCTAGCCTCGGTAATCTGTACTTCTGTACAAAATCGT 36535 || || || ||||| || || | ||||| | | || ||||| | |||| || Sbjct 2182370 ATAATCTGGAAGCCGTAAAAGCAGCGCGCCTCAGCGACTTGCACTTCGTTTGAAAAGCGC 2182429 Query 36536 TCTGCTAAATTTTCATTCACTATTCCGTCACTGGCTGCAAAAAACGCCAATACATGTTTT 36595 || | | ||| || ||||| || || || | | || || || || | ||||| Sbjct 2182430 TCCACGAGATTCTCGTTCACAATGCCATCGGAGCCAGCGAAGAAGGCAAGAACATGAGAG 2182489 Query 36596 ATAAAATATTTTTCGTTTGGTGTTA---GTTTATTCCAATCATTGATATCTTTAGATATA 36652 ||||| || |||| | | | || | ||| || |||||| | || | Sbjct 2182490 ATAAAGTACCGCTCGTCATCATTCAAACGCTTTTCCCAGTCCCAGATATCATGCGAGAGG 2182549 Query 36653 TCCACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTTTTTATACATATTCCAGAT 36708 || | ||||| | ||||| || || |||||||| || || ||||| ||||||| Sbjct 2182550 TCAATCTCTTCTGCAGTCCAGAAGGAGGCCTCTGCTTTCTTGTACATCCTCCAGAT 2182605 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 658169838222400