Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Taiwanofungus_20camphoratus_20[genbank_20GCA_5F000766995.1_202014- 10-15] 360 sequences; 32,155,604 total letters Query= NC_003529.1 Length=155060 Score E Sequences producing significant alignments: (Bits) Value seq223 104 2e-17 seq1 84.2 2e-11 seq306 82.4 8e-11 >seq223 Length=1670925 Score = 104 bits (114), Expect = 2e-17 Identities = 144/199 (72%), Gaps = 2/199 (1%) Strand=Plus/Plus Query 139568 GTAGACTCTTTTTGAATGTTATAATCGCTCATTGTGCTCGAGTCTTCGAGCTGTTTACCA 139627 |||||||| || ||||||||||| ||| | || | | |||||||| || || ||| Sbjct 1064628 GTAGACTCCTTCTGAATGTTATAGTCGGAAAGGGTCCGCCCATCTTCGAGTTGCTTTCCA 1064687 Query 139628 GCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTGATTTTTTG-TTT 139686 ||| |||| || ||||||||||| ||||| |||||||| ||||| ||| | || | ||| Sbjct 1064688 GCAAAGATGAGGCGTTGCTGATCAGGAGGAATGCCTTCCTTGTC-CTGAATCTTAGCTTT 1064746 Query 139687 TAGCTGTTCCACTGTGTCGGTGGGCTCCACCTCAACGGTCACCGTCTTGCCGGTCAACGT 139746 | | || | || |||| | ||| ||||| | || | ||||||||| || | || Sbjct 1064747 GACGTTGTCGATCGTATCGGACGACTCGACCTCGAGTGTGATCGTCTTGCCAGTGAGAGT 1064806 Query 139747 TTTTACGAATATTTGCATA 139765 || || || || |||||| Sbjct 1064807 CTTCACAAAGATCTGCATA 1064825 Score = 95.1 bits (104), Expect = 1e-14 Identities = 146/206 (71%), Gaps = 2/206 (1%) Strand=Plus/Plus Query 139561 GTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTCATTGTGCTCGAGTCTTCGAGCTG 139620 ||||| ||||| || || ||||| || ||||| || || | || || || || Sbjct 1064902 GTGAAGGGTAGATTCCTTCTGAATATTGTAATCAGACAGCGTCCGGCCATCCTCAAGTTG 1064961 Query 139621 TTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTGATTTT 139680 || |||||| ||||||||||||||||||| ||||| || || || ||||| ||| | | Sbjct 1064962 CTTTCCAGCAAAGATCAGACGTTGCTGATCTGGAGGGATACCCTCCTTGTC-CTGAATCT 1065020 Query 139681 TTG-TTTTAGCTGTTCCACTGTGTCGGTGGGCTCCACCTCAACGGTCACCGTCTTGCCGG 139739 ||| ||| | | || | ||||| | | ||| ||||||| || | ||||||||| | Sbjct 1065021 TTGCTTTCACGTTATCGATAGTGTCCGACGACTCAACCTCAAGTGTAATCGTCTTGCCAG 1065080 Query 139740 TCAACGTTTTTACGAATATTTGCATA 139765 | | || || || || || |||||| Sbjct 1065081 TGAGAGTCTTCACAAAAATCTGCATA 1065106 Score = 86.0 bits (94), Expect = 6e-12 Identities = 158/229 (69%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 139538 CCGCCTCGTAAACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTC 139597 || || || | ||| | ||| | ||||| || ||||| || ||||| || ||||| Sbjct 1064370 CCTCCGCGAAGACGAAGAACGAGGTGAAGAGTCGACTCCTTCTGAATATTGTAATCCGAG 1064429 Query 139598 ATTGTGCTCGAGTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 139657 | || || ||| |||||||| || ||||| |||||| || || || || || || Sbjct 1064430 AGCGTTCTACCGTCCTCGAGCTGCTTGCCAGCGAAGATCAAGCGCTGTTGGTCTGGCGGA 1064489 Query 139658 ATGCCTTCTTTGTCGGTGATTTTTTGTTTTAGCTGT-TCCACTGTGTCGGTGGGCTCCAC 139716 |||||||| || || ||| | |||| || | | || | ||||| | | ||| || Sbjct 1064490 ATGCCTTCCTTATCC-TGAATCTTTGCCTTCACGTTATCGATCGTGTCTGATGACTCGAC 1064548 Query 139717 CTCAACGGTCACCGTCTTGCCGGTCAACGTTTTTACGAATATTTGCATA 139765 ||| | || | ||||||||||| | ||| || || || ||||||||| Sbjct 1064549 CTCCAACGTGATGGTCTTGCCGGTAAGCGTCTTCACAAAAATTTGCATA 1064597 >seq1 Length=2218769 Score = 84.2 bits (92), Expect = 2e-11 Identities = 154/223 (69%), Gaps = 2/223 (1%) Strand=Plus/Minus Query 52564 AAAAAGGATGATTGGGCATTGAAATGGATCGAAAACGACAAAGCCACTTTTGCCGAACGT 52623 ||||||| ||| |||||| || |||||| || | || |||| || || || || Sbjct 2182257 AAAAAGGCTGACTGGGCACTGCGATGGATTTCTGACAAGGAATCCACGTTCGCGGAGCGG 2182198 Query 52624 CTGGTCGCGTTTGCTATAGTGGAAGGTGTGtttttttCGGGTAGTTTTGCGGCAATATTT 52683 || ||||| || || || ||||| | || || || || ||||| | ||||| Sbjct 2182197 CTTGTCGCTTTCGCGGCTGTCGAAGGCATATTCTTCTCCGGCTCCTTTGCATCCATATTC 2182138 Query 52684 TACATCAAAACCTTGGGCATAATGCCCGGCCTCACGTTTAGCAACGAGTTGAT-ATCGCG 52742 | |||| | ||| | ||||| ||||| ||||| ||| ||| |||| ||| || Sbjct 2182137 TGGCTCAAGAAAAGGGGTCTCATGCCTGGCCTGACGTTCTCCAATGAGCTGATTATC-CG 2182079 Query 52743 CGACGAAGGAATGCACACAGATTTTGCGTGTTTGTATTATAAT 52785 |||||| |||||||| || ||||||||||| ||| ||| || Sbjct 2182078 CGACGAGGGAATGCATACTGATTTTGCGTGCCTGTTGTATCAT 2182036 >seq306 Length=1616116 Score = 82.4 bits (90), Expect = 8e-11 Identities = 115/159 (72%), Gaps = 2/159 (1%) Strand=Plus/Minus Query 52894 GGCATGAACGCGACCATGATGTGCGAGTACATCGAGTTTGTTGCGGACAGACT-GTTGAT 52952 ||||||||||||| | |||||| ||||||| |||||||| |||||| || | ||| Sbjct 903981 GGCATGAACGCGAAACTCATGTGCCAGTACATTGAGTTTGTCGCGGACCGATTGGTTTTC 903922 Query 52953 GCAGCTCGGTCAGCCGAAATACTATAATGCGCGTAACCCCTTTTCGTTTATGAACAACAT 53012 ||| |||||| | ||||| ||| ||| | ||||||||| || ||| ||| || Sbjct 903921 GCA-CTCGGTGATCCGAAGATCTACAATTCCACGAACCCCTTTGACTTCATGGACATGAT 903863 Query 53013 ATCGCTCGAGGGCAAAACAAACTTTTTCGAGAGACGTGT 53051 || | | || || || ||||| ||||||| ||||| Sbjct 903862 CTCATTGCAAGGGAAGACCAACTTCTTCGAGAAGCGTGT 903824 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 496061767712000