Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Taiwanofungus_20camphoratus_20[genbank_20GCA_5F000766995.1_202014- 10-15] 360 sequences; 32,155,604 total letters Query= NC_003663.2 Length=224499 Score E Sequences producing significant alignments: (Bits) Value seq306 201 2e-46 seq1 172 8e-38 >seq306 Length=1616116 Score = 201 bits (222), Expect = 2e-46 Identities = 382/561 (68%), Gaps = 6/561 (1%) Strand=Plus/Plus Query 49956 CAAACATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAAAACGT 50015 |||||| || || ||| ||||| ||||| || | ||| || || || || || ||||| Sbjct 904147 CAAACACGCAAAGTCGGTGTGCATGCCCTCATCACGACTTATCAGCTCATTCGAGAACGT 904206 Query 50016 GAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGACCCAGAAAA 50075 || || ||||| ||||||||||| || ||||| || ||||||||||| |||||||| || Sbjct 904207 CAGACCAGGCATCAGGCCACGCTTCTTGAGCCAGAAAATGGACGCAAAGGACCCAGAGAA 904266 Query 50076 GAAGATTCCTTCTACTGCGGCAAAGGCAACAAGTCTCTCTCCATAACTGGCGCTGTCAT- 50134 ||| || || |||||||| ||||||||||| |||| ||| || | | | | | || Sbjct 904267 GAAAATGCCCTCTACTGCAGCAAAGGCAACGAGTCGCTCAGCAAATGTAGACTTCTTATC 904326 Query 50135 --GTATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATGGC 50192 |||||| ||||| || |||||||| || | |||||| || || || ||||| Sbjct 904327 CGAAATCCACCGCAATGCCCAGTCAGCCTTCTTCTTGATACAAGGGATGGTGTCAATGGC 904386 Query 50193 ATTAAAGAGATAGtttttttCATTACTATCTTTAACATAAGTATCGATCAAAAGACTATA 50252 | |||||||| | | | | | || || | ||||||||||| | ||| || Sbjct 904387 GTCAAAGAGATGTTCTCGCTGCTGAGGGTCCTTGATGTAAGTATCGATGAGAAGGGAGTA 904446 Query 50253 CATTTCCGAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTAGCCTCGGT 50312 | || || |||||||| || || ||||| || || ||||| |||| || || | Sbjct 904447 TGTCTCGGAGTGAATGTTCTCCATCATGATCTGGAAGCCATAGAAGCATCGCGCTTCTGC 904506 Query 50313 AATCTGCACTTCTGTACAAAATCGTTCAGCTAAATTTTCATTCACTATTCCGTCACTGGC 50372 | ||| || || | | || || ||| | | ||| || || || || || || || Sbjct 904507 AGCCTGTACCTCATTGGAGAACCGCTCAACGAGATTCTCGTTGACAATGCCATCCGACGC 904566 Query 50373 TGCAAAAAACGCCAATACATGTTTTATAAAATGTTTTTCGTTGGGTGTTA---GTTTATT 50429 ||||| ||||| | ||||| | || ||| | ||| | | | | || || Sbjct 904567 AGCAAAGAACGCGAGAACATGCGAAAGGAAGTGTCTCTCGCCGTCGTTCAAGCGGTTGTT 904626 Query 50430 CCAATCATTGATATCTTTAGATATATCTACTTCTTCCACTGTCCAAAATGATGCCTCTGC 50489 ||| |||| | || || |||| || | || |||| ||||| || || ||||| || Sbjct 904627 CCAGTCATGCAGGTCCTTCGATAGGTCAATCTCCTCCATCGTCCAGAAAGAAGCCTCGGC 904686 Query 50490 CTTTTTATACATATTCCAGAT 50510 ||| |||||||| | |||||| Sbjct 904687 CTTCTTATACATCTGCCAGAT 904707 >seq1 Length=2218769 Score = 172 bits (190), Expect = 8e-38 Identities = 378/563 (67%), Gaps = 10/563 (2%) Strand=Plus/Minus Query 49956 CAAACATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAAAACGT 50015 ||| ||||| || ||| |||| ||||||||| | || || || || || || ||||| Sbjct 2184301 CAAGCATGCAAAGTCGGTATGCATACCCTCGTCACGGCTGATAAGCTCATTTGAGAACGT 2184242 Query 50016 GAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGACCCAGAAAA 50075 ||| || ||||| | ||| | ||| || ||||| || || || ||||| || || ||||| Sbjct 2184241 GAGACCAGGCATCAAGCCTCTCTTCTTCAGCCAGAAAATCGAGGCAAAAGATCCTGAAAA 2184182 Query 50076 GAAGATTCCTTCTACTGCGGCAAAGGCAACAAGTCTCTCTCCATAACTGGCGCTGTCATG 50135 |||||| || || || || || |||||||| || | ||| | ||| | | | || | Sbjct 2184181 GAAGATACCCTCAACAGCAGCGAAGGCAACGAGCCGCTCAGC-GAAC-GCAGATTTCTGG 2184124 Query 50136 T-----ATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATG 50190 | |||||| | ||||| || |||||||| || | || || || || || || Sbjct 2184123 TCCGAGATCCACCGCAGCGCCCAGTCAGCCTTCTTCTTGATGCATGGAATAGTGTCAATA 2184064 Query 50191 GCATTAAAGAGATAGtttttttCATTACTATCTTTAACATAAGTATCGATCAAAAGACTA 50250 |||| || || | | | | || || | ||||| ||||| | |||| Sbjct 2184063 GCATCGAAAAGGTGCTCCCGCTGCGCAGGGTCCTTGATGTAAGTGTCGATAAGAAGAGAG 2184004 Query 50251 TACATTTCCGAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTAGCCTCG 50310 || | || || |||||||| || || || || || |||||||| || | |||||| Sbjct 2184003 TATGTCTCAGAGTGAATGTTCTCCATCATGATTTGGAAACCGTAGAAGCAGCGGGCCTCG 2183944 Query 50311 GTAATCTGCACTTCTGTACAAAATCGTTCAGCTAAATTTTCATTCACTATTCCGTCACTG 50370 | || ||||||||| | | ||||| ||| | | || ||||| || || || || Sbjct 2183943 GCAACCTGCACTTCATTCGAGAATCGCTCAACAAGGTTCTCATTGACGATGCCATCCGAC 2183884 Query 50371 GCTGCAAAAAACGCCAATACATGTTTTATAAA---ATGTTTTTCGTTGGGTGTTAGTTTA 50427 || ||||| || || | || || |||||| | ||| ||| | || | || Sbjct 2183883 GCAGCAAAGAAAGCAAGAACGTGAGATATAAAGTGACGTTCGCCGTCGTTCATTCGGTTG 2183824 Query 50428 TTCCAATCATTGATATCTTTAGATATATCTACTTCTTCCACTGTCCAAAATGATGCCTCT 50487 ||||| |||| || || || || | ||| || || |||| |||||| || || ||||| Sbjct 2183823 TTCCAGTCATGGAGGTCCTTCGAGAGATCAACCTCCTCCATTGTCCAGAAGGAGGCCTCA 2183764 Query 50488 GCCTTTTTATACATATTCCAGAT 50510 |||||||| ||||| |||||| Sbjct 2183763 GCCTTTTTGTACATCCGCCAGAT 2183741 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 718265567790400