Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Taiwanofungus_20camphoratus_20[genbank_20GCA_5F000766995.1_202014- 10-15] 360 sequences; 32,155,604 total letters Query= NC_004002.1 Length=149955 Score E Sequences producing significant alignments: (Bits) Value seq306 129 6e-25 seq1 111 2e-19 >seq306 Length=1616116 Score = 129 bits (142), Expect = 6e-25 Identities = 248/364 (68%), Gaps = 4/364 (1%) Strand=Plus/Plus Query 13863 AAAATTAAACACGCAAAATCACAATGAAGGCCCTCATCTCTACTAATAAGTTCGTTTGAA 13922 |||| ||||||||||| || || | ||||||||| | ||| || || || || || Sbjct 904142 AAAAGCAAACACGCAAAGTCGGTGTGCATGCCCTCATCACGACTTATCAGCTCATTCGAG 904201 Query 13923 AATGTTAATCCTGGCATCAATCCTCGtttttttAACCAAAATATTGCAGCAAATGACCCG 13982 || || | || ||||||| || || || || | ||| || || | ||||| ||||| Sbjct 904202 AACGTCAGACCAGGCATCAGGCCACGCTTCTTGAGCCAGAAAATGGACGCAAAGGACCCA 904261 Query 13983 GAAAAGAATATTCCCTCAACTGCAGCAAACGCTATTAATCGTTCTCCAAACGATGCTTTT 14042 || ||||| || ||||| ||||||||||| || | | ||| || |||| | | || Sbjct 904262 GAGAAGAAAATGCCCTCTACTGCAGCAAAGGCAACGAGTCGCTCAGCAAATGTAGACTTC 904321 Query 14043 TTGTTCGATATCCATTTTCTAGCCCATTCAGAtttttttttAATAAAATCCATTGTTTCA 14102 || | ||| ||||| ||||| |||| || || || ||| || || || ||| Sbjct 904322 TTATCCGAAATCCACCGCAATGCCCAGTCAGCCTTCTTCTTGATACAAGGGATGGTGTCA 904381 Query 14103 ATAGCATTAAATAAATATTCCTTCTCTTTA--GTACTTGAAATGTATGTATCAATAAGTA 14160 || || | ||| | || ||| || | | || |||| ||||| ||||| || || | Sbjct 904382 ATGGCGTCAAAGAGATGTTCTCGCTGCTGAGGGTCCTTG--ATGTAAGTATCGATGAGAA 904439 Query 14161 AGCTATACATTTCAGAGTGTATGTTTTCCATAGCTATCTGAAAACCATAAAAGCATCTAG 14220 | || | || ||||| ||||| ||||| ||||| || ||||| ||||||| | Sbjct 904440 GGGAGTATGTCTCGGAGTGAATGTTCTCCATCATGATCTGGAAGCCATAGAAGCATCGCG 904499 Query 14221 CTTC 14224 |||| Sbjct 904500 CTTC 904503 >seq1 Length=2218769 Score = 111 bits (122), Expect = 2e-19 Identities = 250/372 (67%), Gaps = 8/372 (2%) Strand=Plus/Plus Query 13872 CACGCAAAATCACAATGAAGGCCCTCATCTCTACTAATAAGTTCGTTTGAAAATGTTAAT 13931 |||||||||||| ||| | ||||| || | |||| || || || || || || | Sbjct 2182049 CACGCAAAATCAGTATGCATTCCCTCGTCGCGGATAATCAGCTCATTGGAGAACGTCAGG 2182108 Query 13932 CCTGGCATCAATCCTCGtttttttAACCAAAATATTGCAGCAAATGACCCGGAAAAGAAT 13991 || ||||| | || | ||| || | ||| ||||| | ||||| || ||||| |||||| Sbjct 2182109 CCAGGCATGAGACCCCTTTTCTTGAGCCAGAATATGGATGCAAAGGAGCCGGAGAAGAAT 2182168 Query 13992 ATTCCCTCAACTGCAGCAAACGCTATTAATCGTTCTCCAAACGATGCTTTTTTGTTCGAT 14051 || || || || || || || || | | || || | |||| | || |||| || Sbjct 2182169 ATGCCTTCGACAGCCGCGAAAGCGACAAGCCGCTCCGCGAACGTGGATTCCTTGTCAGAA 2182228 Query 14052 ATCCATTTTCTAGCCCATTCAGAtttttttttAATAAAATCCATTGTTTCAATAGCATTA 14111 |||||| ||||| |||| |||||||||||| | || || || || |||| Sbjct 2182229 ATCCATCGCAGTGCCCAGTCAGCCTTTTTTTTAATACATGGGATGGTCTCGATCGCATCG 2182288 Query 14112 AATAAATATTCC--TTCTCTTTAGTACTTGAAATGTATGTATCAATAAGTAAGCTATACA 14169 || |||| ||| || | || || |||| |||||||| ||||| || | || Sbjct 2182289 AACAAATGGTCCCGTTGTTGTTGGTCCTTG--ATGTATGTGTCAATGAGCAGAGAGTATG 2182346 Query 14170 TTTCAGAGTGTATGTTTTCCATAGCTATCTGAAAACCATAAAAGCATCTAGCTTC--CGA 14227 | || || || ||||| ||||| ||||| || || |||||||| | || || ||| Sbjct 2182347 TCTCGGAATGAATGTTCTCCATCATAATCTGGAAGCCGTAAAAGCAGCGCGCCTCAGCGA 2182406 Query 14228 CCATTGTACTTC 14239 | ||| ||||| Sbjct 2182407 C--TTGCACTTC 2182416 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 479725841224000