Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Taiwanofungus_20camphoratus_20[genbank_20GCA_5F000766995.1_202014- 10-15] 360 sequences; 32,155,604 total letters Query= NC_004003.1 Length=149599 Score E Sequences producing significant alignments: (Bits) Value seq1 114 1e-20 seq306 111 2e-19 >seq1 Length=2218769 Score = 114 bits (126), Expect = 1e-20 Identities = 234/346 (68%), Gaps = 4/346 (1%) Strand=Plus/Plus Query 13660 CACGCAAAATCACAATGAAGGCCCTCATCTCTACTAATAAGTTCGTTTGAAAATGTTAAT 13719 |||||||||||| ||| | ||||| || | |||| || || || || || || | Sbjct 2182049 CACGCAAAATCAGTATGCATTCCCTCGTCGCGGATAATCAGCTCATTGGAGAACGTCAGG 2182108 Query 13720 CCTGGCATCAATCCTCGtttttttAACCAAAATATTGCAGCGAATGATCCGGAAAAGAAT 13779 || ||||| | || | ||| || | ||| ||||| | || || || ||||| |||||| Sbjct 2182109 CCAGGCATGAGACCCCTTTTCTTGAGCCAGAATATGGATGCAAAGGAGCCGGAGAAGAAT 2182168 Query 13780 ATTCCCTCAACTGCAGCAAACGCTATTAGTCGTTCTCCAAACGATGCTTTTTTGTTTGAT 13839 || || || || || || || || | || || || | |||| | || |||| || Sbjct 2182169 ATGCCTTCGACAGCCGCGAAAGCGACAAGCCGCTCCGCGAACGTGGATTCCTTGTCAGAA 2182228 Query 13840 ATCCATTTTCTAGCCCATTCAGAtttttttttAATAAAATCCATTGTTTCGATTGCATTG 13899 |||||| ||||| |||| |||||||||||| | || || ||||| |||| | Sbjct 2182229 ATCCATCGCAGTGCCCAGTCAGCCTTTTTTTTAATACATGGGATGGTCTCGATCGCATCG 2182288 Query 13900 AATAAATGTTCC--TTCTCTTTAGTACTTGAAATGTATGTATCAATAAGTAAGCTATACA 13957 || ||||| ||| || | || || |||| |||||||| ||||| || | || Sbjct 2182289 AACAAATGGTCCCGTTGTTGTTGGTCCTTG--ATGTATGTGTCAATGAGCAGAGAGTATG 2182346 Query 13958 TTTCAGAGTGTATGTTTTCTATAGCTATCTGAAAACCATAAAAACA 14003 | || || || ||||| || || ||||| || || ||||| || Sbjct 2182347 TCTCGGAATGAATGTTCTCCATCATAATCTGGAAGCCGTAAAAGCA 2182392 >seq306 Length=1616116 Score = 111 bits (122), Expect = 2e-19 Identities = 253/379 (67%), Gaps = 4/379 (1%) Strand=Plus/Plus Query 13651 AAAATTAAACACGCAAAATCACAATGAAGGCCCTCATCTCTACTAATAAGTTCGTTTGAA 13710 |||| ||||||||||| || || | ||||||||| | ||| || || || || || Sbjct 904142 AAAAGCAAACACGCAAAGTCGGTGTGCATGCCCTCATCACGACTTATCAGCTCATTCGAG 904201 Query 13711 AATGTTAATCCTGGCATCAATCCTCGtttttttAACCAAAATATTGCAGCGAATGATCCG 13770 || || | || ||||||| || || || || | ||| || || | || || || || Sbjct 904202 AACGTCAGACCAGGCATCAGGCCACGCTTCTTGAGCCAGAAAATGGACGCAAAGGACCCA 904261 Query 13771 GAAAAGAATATTCCCTCAACTGCAGCAAACGCTATTAGTCGTTCTCCAAACGATGCTTTT 13830 || ||||| || ||||| ||||||||||| || | ||||| || |||| | | || Sbjct 904262 GAGAAGAAAATGCCCTCTACTGCAGCAAAGGCAACGAGTCGCTCAGCAAATGTAGACTTC 904321 Query 13831 TTGTTTGATATCCATTTTCTAGCCCATTCAGAtttttttttAATAAAATCCATTGTTTCG 13890 || | || ||||| ||||| |||| || || || ||| || || || || Sbjct 904322 TTATCCGAAATCCACCGCAATGCCCAGTCAGCCTTCTTCTTGATACAAGGGATGGTGTCA 904381 Query 13891 ATTGCATTGAATAAATGTTCCTTCTCTTTA--GTACTTGAAATGTATGTATCAATAAGTA 13948 || || | || | |||||| || | | || |||| ||||| ||||| || || | Sbjct 904382 ATGGCGTCAAAGAGATGTTCTCGCTGCTGAGGGTCCTTG--ATGTAAGTATCGATGAGAA 904439 Query 13949 AGCTATACATTTCAGAGTGTATGTTTTCTATAGCTATCTGAAAACCATAAAAACATCTAG 14008 | || | || ||||| ||||| || || ||||| || ||||| || |||| | Sbjct 904440 GGGAGTATGTCTCGGAGTGAATGTTCTCCATCATGATCTGGAAGCCATAGAAGCATCGCG 904499 Query 14009 CTTCTGACCATTGTACCTC 14027 |||||| |||||||| Sbjct 904500 CTTCTGCAGCCTGTACCTC 904518 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 478586646350400