Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Taiwanofungus_20camphoratus_20[genbank_20GCA_5F000766995.1_202014- 10-15] 360 sequences; 32,155,604 total letters Query= NC_004062.1 Length=119217 Score E Sequences producing significant alignments: (Bits) Value seq328 95.1 9e-15 seq223 82.4 6e-11 >seq328 Length=1291088 Score = 95.1 bits (104), Expect = 9e-15 Identities = 150/211 (71%), Gaps = 3/211 (1%) Strand=Plus/Minus Query 42901 ACCAA-ATGGATAGTGCTCTCCTTTTGCACATTGTAATCGGACAATGTACGTTCGTCGTC 42959 ||||| ||||| ||||||||||| || | |||||| || || | ||||| |||| || Sbjct 622591 ACCAAGATGGAGTGTGCTCTCCTTCTGAATATTGTAGTCAGAGAGAGTACGGCCGTCCTC 622532 Query 42960 CAATTGTTTGCCGGCAAAAATCAATCGCTGTTGATCGGCCGGCACACCTTCTTTTTCGCT 43019 || || |||||||| || ||||| || |||||||| | ||| | ||||| || || || Sbjct 622531 CAGCTGCTTGCCGGCGAAGATCAAACGTTGTTGATCAGGCGGGATGCCTTCCTTGTC-CT 622473 Query 43020 G-ATCAACTCTTTGACTCTGCCAACTGTGTCGCCAGCCTCGACGTCTACCGTTATAGTTT 43078 | ||| | ||||| || | | || || || ||| || || | || ||||| | Sbjct 622472 GTATCTTGGCCTTGACATTGTCGATGGTATCAGAAGACTCCACCTCAAGGGTGATAGTCT 622413 Query 43079 TTCCGGTTAGAGTTTTCACAAAAATTTGCAT 43109 |||| || | || || || ||||| ||||| Sbjct 622412 TTCCAGTCAATGTCTTGACGAAAATCTGCAT 622382 Score = 82.4 bits (90), Expect = 6e-11 Identities = 137/198 (69%), Gaps = 0/198 (0%) Strand=Plus/Minus Query 42912 AGTGCTCTCCTTTTGCACATTGTAATCGGACAATGTACGTTCGTCGTCCAATTGTTTGCC 42971 |||||||||||| || | |||||| ||||| | || || |||| ||||| |||||||| Sbjct 622301 AGTGCTCTCCTTCTGAATATTGTAGTCGGAAAGAGTGCGGCCGTCCTCCAACTGTTTGCC 622242 Query 42972 GGCAAAAATCAATCGCTGTTGATCGGCCGGCACACCTTCTTTTTCGCTGATCAACTCTTT 43031 || || || | ||||| ||||||| || | || || || || |||| | | || Sbjct 622241 AGCGAAGATAAGACGCTGCTGATCGGGAGGAATGCCCTCCTTGTCTTGGATCTTCGCCTT 622182 Query 43032 GACTCTGCCAACTGTGTCGCCAGCCTCGACGTCTACCGTTATAGTTTTTCCGGTTAGAGT 43091 || | | | ||||| || ||| || || | ||| ||||| || || || || || Sbjct 622181 CACGTTATCGATGGTGTCAGAAGACTCCACCTCGAGCGTGATAGTCTTGCCCGTAAGGGT 622122 Query 43092 TTTCACAAAAATTTGCAT 43109 || || || || ||||| Sbjct 622121 CTTGACGAAGATCTGCAT 622104 >seq223 Length=1670925 Score = 82.4 bits (90), Expect = 6e-11 Identities = 139/199 (70%), Gaps = 2/199 (1%) Strand=Plus/Plus Query 42913 GTGCTCTCCTTTTGCACATTGTAATCGGACAATGTACGTTCGTCGTCCAATTGTTTGCCG 42972 ||||||||||| || | ||| ||||| || | || | | || ||||| ||||| || Sbjct 1064172 GTGCTCTCCTTCTGAATATTATAATCCGAGAGCGTTCTGCCATCCTCCAACTGTTTCCCC 1064231 Query 42973 GCAAAAATCAATCGCTGTTGATCGGCCGGCACACCTTCTTTTTCGCTG-ATCAACTCTTT 43031 || || ||||| || || || || | || | ||| || || || ||| ||| | | || Sbjct 1064232 GCGAAGATCAAGCGTTGCTGGTCAGGAGGGATACCCTCCTTATC-CTGAATCTTCGCCTT 1064290 Query 43032 GACTCTGCCAACTGTGTCGCCAGCCTCGACGTCTACCGTTATAGTTTTTCCGGTTAGAGT 43091 || || | | ||||| | ||| || || | || ||||| || || || || || Sbjct 1064291 CACATTGTCGATCGTGTCTGATGACTCCACTTCCAATGTGATAGTCTTGCCCGTAAGTGT 1064350 Query 43092 TTTCACAAAAATTTGCATT 43110 ||||||||||||||||||| Sbjct 1064351 TTTCACAAAAATTTGCATT 1064369 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 381367926740880