Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Taiwanofungus_20camphoratus_20[genbank_20GCA_5F000766995.1_202014- 10-15] 360 sequences; 32,155,604 total letters Query= NC_004105.1 Length=209771 Score E Sequences producing significant alignments: (Bits) Value seq306 194 2e-44 seq1 149 8e-31 >seq306 Length=1616116 Score = 194 bits (214), Expect = 2e-44 Identities = 384/564 (68%), Gaps = 12/564 (2%) Strand=Plus/Plus Query 42061 CAAACATGCGAAATCGCAGTGCAGACCCTCATCTCTACTAATTAATTCGTTGGAAAACGT 42120 |||||| || || ||| ||||| |||||||| | ||| || | || || || ||||| Sbjct 904147 CAAACACGCAAAGTCGGTGTGCATGCCCTCATCACGACTTATCAGCTCATTCGAGAACGT 904206 Query 42121 GAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATAGACGCAAATGATCCAGAAAA 42180 || || ||||| ||||||||||| || ||||| || || |||||||| || ||||| || Sbjct 904207 CAGACCAGGCATCAGGCCACGCTTCTTGAGCCAGAAAATGGACGCAAAGGACCCAGAGAA 904266 Query 42181 GAAGATTCCTTCTACTGCCGCAAAGGCAATAAGTCTCTCTCCATAACCGGCACTGTCATG 42240 ||| || || |||||||| |||||||||| |||| ||| || || ||| || | Sbjct 904267 GAAAATGCCCTCTACTGCAGCAAAGGCAACGAGTCGCTCAGCA-AATGTAGACT-TCTTA 904324 Query 42241 T-----ATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATG 42295 | |||||| ||||| || |||||||| || | |||||| || || || ||| Sbjct 904325 TCCGAAATCCACCGCAATGCCCAGTCAGCCTTCTTCTTGATACAAGGGATGGTGTCAATG 904384 Query 42296 GCATTAAAGAGATAGtttttttCATTACTATCTTTAACATATGTATCGATCAAAAGACTA 42355 || | |||||||| | | | | | || || | || |||||||| | ||| Sbjct 904385 GCGTCAAAGAGATGTTCTCGCTGCTGAGGGTCCTTGATGTAAGTATCGATGAGAAGGGAG 904444 Query 42356 TACATTTCTGAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTGGCCTCG 42415 || | || || |||||||| || || ||||| || || ||||| |||| || || Sbjct 904445 TATGTCTCGGAGTGAATGTTCTCCATCATGATCTGGAAGCCATAGAAGCATCGCGCTTCT 904504 Query 42416 GTAACCTGTACTTCTGTACAAAATCGTTCAGCTAAATTTTCGTTCACTATTCCGTCACTG 42475 | | ||||||| || | | || || ||| | | ||| ||||| || || || || Sbjct 904505 GCAGCCTGTACCTCATTGGAGAACCGCTCAACGAGATTCTCGTTGACAATGCCATCCGAC 904564 Query 42476 GCTGCAAAAAACGCCAATACATGTTTTATAAAATATTTTTCGTCCGGTGTTAA----TTT 42531 || ||||| ||||| | ||||| | || | | | ||| ||| ||| | || Sbjct 904565 GCAGCAAAGAACGCGAGAACATGCGAAAGGAAGTGTCTCTCG-CCGTCGTTCAAGCGGTT 904623 Query 42532 ATTCCAATCATTGATATCTTTAGATATATCTACTTCTTCTACCGTCCAAAATGATGCTTC 42591 ||||| |||| | || || |||| || | || || | |||||| || || || || Sbjct 904624 GTTCCAGTCATGCAGGTCCTTCGATAGGTCAATCTCCTCCATCGTCCAGAAAGAAGCCTC 904683 Query 42592 TGCCTTTTTATACATATTCCAGAT 42615 ||||| |||||||| | |||||| Sbjct 904684 GGCCTTCTTATACATCTGCCAGAT 904707 >seq1 Length=2218769 Score = 149 bits (164), Expect = 8e-31 Identities = 375/565 (66%), Gaps = 14/565 (2%) Strand=Plus/Minus Query 42061 CAAACATGCGAAATCGCAGTGCAGACCCTCATCTCTACTAATTAATTCGTTGGAAAACGT 42120 ||| ||||| || ||| |||| |||||| || | || || | || || || ||||| Sbjct 2184301 CAAGCATGCAAAGTCGGTATGCATACCCTCGTCACGGCTGATAAGCTCATTTGAGAACGT 2184242 Query 42121 GAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATAGACGCAAATGATCCAGAAAA 42180 ||| || ||||| | ||| | ||| || ||||| || || || ||||| ||||| ||||| Sbjct 2184241 GAGACCAGGCATCAAGCCTCTCTTCTTCAGCCAGAAAATCGAGGCAAAAGATCCTGAAAA 2184182 Query 42181 GAAGATTCCTTCTACTGCCGCAAAGGCAATAAGTCTCTCTCCATAACCGGCA-----CT- 42234 |||||| || || || || || ||||||| || | ||| | ||| ||| || Sbjct 2184181 GAAGATACCCTCAACAGCAGCGAAGGCAACGAGCCGCTCAGC-GAAC--GCAGATTTCTG 2184125 Query 42235 GTCATGTATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTAT 42294 ||| |||||| | ||||| || |||||||| || | || || || || || || Sbjct 2184124 GTCCGAGATCCACCGCAGCGCCCAGTCAGCCTTCTTCTTGATGCATGGAATAGTGTCAAT 2184065 Query 42295 GGCATTAAAGAGATAGtttttttCATTACTATCTTTAACATATGTATCGATCAAAAGACT 42354 |||| || || | | | | || || | || || ||||| | |||| Sbjct 2184064 AGCATCGAAAAGGTGCTCCCGCTGCGCAGGGTCCTTGATGTAAGTGTCGATAAGAAGAGA 2184005 Query 42355 ATACATTTCTGAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTGGCCTC 42414 || | || || |||||||| || || || || || |||||||| || | |||||| Sbjct 2184004 GTATGTCTCAGAGTGAATGTTCTCCATCATGATTTGGAAACCGTAGAAGCAGCGGGCCTC 2183945 Query 42415 GGTAACCTGTACTTCTGTACAAAATCGTTCAGCTAAATTTTCGTTCACTATTCCGTCACT 42474 || |||||| ||||| | | ||||| ||| | | || || || || || || || Sbjct 2183944 GGCAACCTGCACTTCATTCGAGAATCGCTCAACAAGGTTCTCATTGACGATGCCATCCGA 2183885 Query 42475 GGCTGCAAAAAACGCCAATACATGTTTTATAAAATATTTTTCGTCCGGTGTTAAT----T 42530 || ||||| || || | || || |||||| | |||| ||| ||| || | Sbjct 2183884 CGCAGCAAAGAAAGCAAGAACGTGAGATATAAAGTGACGTTCG-CCGTCGTTCATTCGGT 2183826 Query 42531 TATTCCAATCATTGATATCTTTAGATATATCTACTTCTTCTACCGTCCAAAATGATGCTT 42590 | ||||| |||| || || || || | ||| || || || | ||||| || || || | Sbjct 2183825 TGTTCCAGTCATGGAGGTCCTTCGAGAGATCAACCTCCTCCATTGTCCAGAAGGAGGCCT 2183766 Query 42591 CTGCCTTTTTATACATATTCCAGAT 42615 | |||||||| ||||| |||||| Sbjct 2183765 CAGCCTTTTTGTACATCCGCCAGAT 2183741 Score = 114 bits (126), Expect = 2e-20 Identities = 365/565 (65%), Gaps = 6/565 (1%) Strand=Plus/Plus Query 42057 ACATCAAACATGCGAAATCGCAGTGCAGACCCTCATCTCTACTAATTAATTCGTTGGAAA 42116 ||| || || || ||||| |||| ||||| || | |||| | || ||||| | Sbjct 2182041 ACAACAGGCACGCAAAATCAGTATGCATTCCCTCGTCGCGGATAATCAGCTCATTGGAGA 2182100 Query 42117 ACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATAGACGCAAATGATCCAG 42176 |||| || || ||||| || || | || || ||||| ||||| || ||||| || || | Sbjct 2182101 ACGTCAGGCCAGGCATGAGACCCCTTTTCTTGAGCCAGAATATGGATGCAAAGGAGCCGG 2182160 Query 42177 AAAAGAAGATTCCTTCTACTGCCGCAAAGGCAATAAGTCTCTCTCCATAACCGG---CAC 42233 | ||||| || ||||| || ||||| || || | ||| | ||| | | || | Sbjct 2182161 AGAAGAATATGCCTTCGACAGCCGCGAAAGCGACAAGCCGCTCCGCGAACGTGGATTCCT 2182220 Query 42234 TGTCATGTATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTA 42293 ||||| ||||| | ||||| || ||||| ||||| | ||| || || || || | Sbjct 2182221 TGTCAGAAATCCATCGCAGTGCCCAGTCAGCCTTTTTTTTAATACATGGGATGGTCTCGA 2182280 Query 42294 TGGCATTAAAGAGATAGtttttttCATTACTATCTTTAACATATGTATCGATCAAAAGAC 42353 | |||| || | || || || | || || | ||||| || || | ||| Sbjct 2182281 TCGCATCGAACAAATGGTCCCGTTGTTGTTGGTCCTTGATGTATGTGTCAATGAGCAGAG 2182340 Query 42354 TATACATTTCTGAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTGGCCT 42413 || | || ||||||||||| || || ||||| || ||||| || || | |||| Sbjct 2182341 AGTATGTCTCGGAATGAATGTTCTCCATCATAATCTGGAAGCCGTAAAAGCAGCGCGCCT 2182400 Query 42414 CGGTAACCTGTACTTCTGTACAAAATCGTTCAGCTAAATTTTCGTTCACTATTCCGTCAC 42473 | | || || ||||| | |||| || || | | ||| |||||||| || || || Sbjct 2182401 CAGCGACTTGCACTTCGTTTGAAAAGCGCTCCACGAGATTCTCGTTCACAATGCCATCGG 2182460 Query 42474 TGGCTGCAAAAAACGCCAATACATGTTTTATAAAATATTTTTCGTCCGGTGTTAA---TT 42530 | | || || || || | ||||| ||||| || ||||| | || | Sbjct 2182461 AGCCAGCGAAGAAGGCAAGAACATGAGAGATAAAGTACCGCTCGTCATCATTCAAACGCT 2182520 Query 42531 TATTCCAATCATTGATATCTTTAGATATATCTACTTCTTCTACCGTCCAAAATGATGCTT 42590 | | ||| || |||||| | || | || | |||||| | ||||| || || || | Sbjct 2182521 TTTCCCAGTCCCAGATATCATGCGAGAGGTCAATCTCTTCTGCAGTCCAGAAGGAGGCCT 2182580 Query 42591 CTGCCTTTTTATACATATTCCAGAT 42615 |||| || || ||||| ||||||| Sbjct 2182581 CTGCTTTCTTGTACATCCTCCAGAT 2182605 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 671136179873600