Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Taiwanofungus_20camphoratus_20[genbank_20GCA_5F000766995.1_202014- 10-15] 360 sequences; 32,155,604 total letters Query= NC_004117.1 Length=158482 Score E Sequences producing significant alignments: (Bits) Value seq223 98.7 1e-15 seq306 82.4 8e-11 >seq223 Length=1670925 Score = 98.7 bits (108), Expect = 1e-15 Identities = 144/204 (71%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 142982 TGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTCATTGTGCTCGAGTCTTCGAGTTGT 143041 |||| |||||||| || || || |||||||| || || | || || ||||| Sbjct 1064903 TGAAGGGTAGATTCCTTCTGAATATTGTAATCAGACAGCGTCCGGCCATCCTCAAGTTGC 1064962 Query 143042 TTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTAATTTTT 143101 || |||||| ||||||||||||||||||| ||||| || || || ||||| ||| ||| Sbjct 1064963 TTTCCAGCAAAGATCAGACGTTGCTGATCTGGAGGGATACCCTCCTTGTCCTGAATCTTT 1065022 Query 143102 TGTTTTAGCTGTTCCACCGTGTCCGTGGGTTCTACTTCAACAGTCACCGTCTTGCCGGTC 143161 ||| | | || | ||||||| | || || |||| || | ||||||||| || Sbjct 1065023 GCTTTCACGTTATCGATAGTGTCCGACGACTCAACCTCAAGTGTAATCGTCTTGCCAGTG 1065082 Query 143162 AATGTTTTTACGAATATTTGCATA 143185 | || || || || || |||||| Sbjct 1065083 AGAGTCTTCACAAAAATCTGCATA 1065106 Score = 87.8 bits (96), Expect = 2e-12 Identities = 138/198 (70%), Gaps = 0/198 (0%) Strand=Plus/Plus Query 142988 GTAGATTCTTTTTGTATGTTGTAATCGCTCATTGTGCTCGAGTCTTCGAGTTGTTTACCA 143047 ||||| || || || ||||| || ||| | || | | ||||||||||| || ||| Sbjct 1064628 GTAGACTCCTTCTGAATGTTATAGTCGGAAAGGGTCCGCCCATCTTCGAGTTGCTTTCCA 1064687 Query 143048 GCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTAATTTTTTGTTTT 143107 ||| |||| || ||||||||||| ||||| |||||||| ||||| ||| || ||| Sbjct 1064688 GCAAAGATGAGGCGTTGCTGATCAGGAGGAATGCCTTCCTTGTCCTGAATCTTAGCTTTG 1064747 Query 143108 AGCTGTTCCACCGTGTCCGTGGGTTCTACTTCAACAGTCACCGTCTTGCCGGTCAATGTT 143167 | | || | ||| || | | || || || | || | ||||||||| || | || Sbjct 1064748 ACGTTGTCGATCGTATCGGACGACTCGACCTCGAGTGTGATCGTCTTGCCAGTGAGAGTC 1064807 Query 143168 TTTACGAATATTTGCATA 143185 || || || || |||||| Sbjct 1064808 TTCACAAAGATCTGCATA 1064825 >seq306 Length=1616116 Score = 82.4 bits (90), Expect = 8e-11 Identities = 118/161 (73%), Gaps = 4/161 (2%) Strand=Plus/Minus Query 50689 GGCATGAACGCAGACATGATGTGCGAGTACATTGAGTTTGTTGCAGACAGATT-GTTGTT 50747 ||||||||||| | | |||||| |||||||||||||||| || ||| |||| ||| | Sbjct 903981 GGCATGAACGCGAAACTCATGTGCCAGTACATTGAGTTTGTCGCGGACCGATTGGTTTTC 903922 Query 50748 GCAGCTGGGACAACCGAAATACTATAA-TGCACGTAACCCCTTTCCGTTTATGAATAACA 50806 ||| || || | ||||| ||| || | |||| ||||||||| || ||| | | | Sbjct 903921 GCA-CTCGGTGATCCGAAGATCTACAATTCCACG-AACCCCTTTGACTTCATGGACATGA 903864 Query 50807 TATCGTTGGAGGGCAAAACAAACTTTTTCGAAAGACGTGTA 50847 | || ||| | || || || ||||| ||||| | |||||| Sbjct 903863 TCTCATTGCAAGGGAAGACCAACTTCTTCGAGAAGCGTGTA 903823 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 507012118435200