Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Taiwanofungus_20camphoratus_20[genbank_20GCA_5F000766995.1_202014- 10-15] 360 sequences; 32,155,604 total letters Query= NC_005839.2 Length=131680 Score E Sequences producing significant alignments: (Bits) Value seq328 107 2e-18 seq223 87.8 2e-12 >seq328 Length=1291088 Score = 107 bits (118), Expect = 2e-18 Identities = 146/204 (72%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 48523 ATGAAGTGTGCTCTCCTTTTGAATGTTGTAATCAGCCAATTGTCGCTCGTCCTCCAGCTG 48582 ||| |||||||||||||| ||||| ||||| |||| | || ||||||||||||| Sbjct 622585 ATGGAGTGTGCTCTCCTTCTGAATATTGTAGTCAGAGAGAGTACGGCCGTCCTCCAGCTG 622526 Query 48583 CTTACCGCCGTAAATTAAACGCTGCTGATCCACCGGCACACTTTCCTTGTCCATAATTTT 48642 ||| ||| || | || ||||| || ||||| ||| | | |||||||||| || || Sbjct 622525 CTTGCCGGCGAAGATCAAACGTTGTTGATCAGGCGGGATGCCTTCCTTGTCCTGTATCTT 622466 Query 48643 CTGCTTGATAGACGCTATGGTATCGGTAGACTCCGTCTCGACTGTTATGGTTTTACCGGT 48702 ||||| | | |||||||| | ||||||| ||| | || || || || || || Sbjct 622465 GGCCTTGACATTGTCGATGGTATCAGAAGACTCCACCTCAAGGGTGATAGTCTTTCCAGT 622406 Query 48703 GAGAGTTTTCACAAAAATCTGCAT 48726 | || || || ||||||||||| Sbjct 622405 CAATGTCTTGACGAAAATCTGCAT 622382 Score = 102 bits (112), Expect = 7e-17 Identities = 162/230 (70%), Gaps = 2/230 (1%) Strand=Plus/Minus Query 48499 ACCTCCGCGCAACCTTAACACTAAATGAAGTGTGCTCTCCTTTTGAATGTTGTAATCAGC 48558 ||| ||||| | | | ||| | ||| || ||||||||||| |||||||||||||||| Sbjct 623169 ACCACCGCGAAGACGGAGCACGAGATGGAGGGTGCTCTCCTTCTGAATGTTGTAATCAGA 623110 Query 48559 CA-ATTGTCGCTCGTCCTCCAGCTGCTTACCGCCGTAAATTAAACGCTGCTGATCCACCG 48617 | | || || |||| ||||||||||| ||| || | || | ||||||||| || | Sbjct 623109 AAGAGTGCGGC-CGTCTTCCAGCTGCTTGCCGGCGAAGATCAGACGCTGCTGGTCAGGAG 623051 Query 48618 GCACACTTTCCTTGTCCATAATTTTCTGCTTGATAGACGCTATGGTATCGGTAGACTCCG 48677 | | || |||||||| ||| ||| |||| | | ||||| || | || ||| Sbjct 623050 GGATACCCTCCTTGTCTTGAATCTTCGCTTTGACATTGTCGATGGTGTCAGACGATTCCA 622991 Query 48678 TCTCGACTGTTATGGTTTTACCGGTGAGAGTTTTCACAAAAATCTGCATC 48727 ||| | || || || || || || | || ||||| |||||||||||| Sbjct 622990 CCTCAAGGGTGATAGTCTTCCCCGTCAACGTCTTCACGAAAATCTGCATC 622941 >seq223 Length=1670925 Score = 87.8 bits (96), Expect = 2e-12 Identities = 134/191 (70%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 48536 TCCTTTTGAATGTTGTAATCAGCCAATTGTCGCTCGTCCTCCAGCTGCTTACCGCCGTAA 48595 ||||| |||||||||||||| | ||| || | ||||| |||||||| || || || Sbjct 1065143 TCCTTCTGAATGTTGTAATCGGACAACGTGCGACCATCCTCGAGCTGCTTTCCAGCGAAA 1065202 Query 48596 ATTAAACGCTGCTGATCCACCGGCACACTTTCCTTGTCCATAATTTTCTGCTTGATAGAC 48655 || | |||||| || || || | || ||||||||| ||| || ||||| Sbjct 1065203 ATGAGACGCTGTTGGTCAGGGGGAATACCCTCCTTGTCCTGAATCTTGGCCTTGACGTTA 1065262 Query 48656 GCTATGGTATCGGTAGACTCCGTCTCGACTGTTATGGTTTTACCGGTGAGAGTTTTCACA 48715 | || || || | ||||| ||||| || ||||| || || ||||| || |||||| Sbjct 1065263 TCGATTGTGTCAGACGACTCGACCTCGAGCGTGATGGTCTTGCCCGTGAGGGTCTTCACA 1065322 Query 48716 AAAATCTGCAT 48726 || |||||||| Sbjct 1065323 AATATCTGCAT 1065333 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 421249351760360