Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Taiwanofungus_20camphoratus_20[genbank_20GCA_5F000766995.1_202014- 10-15] 360 sequences; 32,155,604 total letters Query= NC_006639.1 Length=24748 Score E Sequences producing significant alignments: (Bits) Value seq90 100 4e-17 seq124 93.3 7e-15 seq317 80.6 4e-11 >seq90 Length=748127 Score = 100 bits (110), Expect = 4e-17 Identities = 85/105 (81%), Gaps = 0/105 (0%) Strand=Plus/Minus Query 16471 AGGAATCACCAAGCCAGCTATCCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTC 16530 ||| ||||| ||||| |||||||| ||||| || ||||||||||| ||||||||| | || Sbjct 376855 AGGTATCACAAAGCCCGCTATCCGCCGTCTTGCCCGTCGTGGTGGTGTCAAGCGTATTTC 376796 Query 16531 TGGATTGGTCTATGAAGAGATTCGTGATGTTTTGAAGATCTTCCT 16575 ||| | ||||||| |||| |||| |||| | || |||||||| Sbjct 376795 TGGTCTCATCTATGAGGAGACCCGTGGTGTTCTCAAAATCTTCCT 376751 Score = 82.4 bits (90), Expect = 1e-11 Identities = 81/105 (77%), Gaps = 0/105 (0%) Strand=Plus/Plus Query 16471 AGGAATCACCAAGCCAGCTATCCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTC 16530 ||| || || ||||| || || |||||||| |||||||||||||| || |||||| | || Sbjct 117422 AGGTATTACAAAGCCCGCCATTCGTCGTCTCGCTCGTCGTGGTGGTGTGAAGCGTATTTC 117481 Query 16531 TGGATTGGTCTATGAAGAGATTCGTGATGTTTTGAAGATCTTCCT 16575 ||| | | || ||||||| | | ||| |||||||| ||||| Sbjct 117482 TGGCCTAATTTACGAAGAGACAAGAGGTGTCTTGAAGATTTTCCT 117526 >seq124 Length=597673 Score = 93.3 bits (102), Expect = 7e-15 Identities = 72/86 (84%), Gaps = 0/86 (0%) Strand=Plus/Plus Query 16487 GCTATCCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAA 16546 |||||||| ||||| |||||||||||||| ||||||||| |||| || ||| |||| || Sbjct 206238 GCTATCCGCCGTCTCGCTCGTCGTGGTGGTGTCAAGCGTATCTCCGGCTTGATCTACGAG 206297 Query 16547 GAGATTCGTGATGTTTTGAAGATCTT 16572 |||| |||| |||| | |||||||| Sbjct 206298 GAGACCCGTGGTGTTCTCAAGATCTT 206323 >seq317 Length=1568814 Score = 80.6 bits (88), Expect = 4e-11 Identities = 102/138 (74%), Gaps = 2/138 (1%) Strand=Plus/Minus Query 16487 GCTATCCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAA 16546 ||||| |||||| |||||||||||||||||||||||||| | || || | | |||||| Sbjct 814010 GCTATTCGTCGTTTGGCTCGTCGTGGTGGAGTCAAGCGTATTTCCGGCCTAATTTATGAA 813951 Query 16547 GAGATTCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGA-TGCTTTCCACTA 16605 |||| |||| ||| | || ||||| | | | ||||| | ||| | | || || || Sbjct 813950 GAGACGCGTGGCGTTCTCAAAATCTTTTTGGAAAATGTTATTCGTGATTCCGTTACA-TA 813892 Query 16606 TACCGAGCACGCTAAACG 16623 || || || ||||| || Sbjct 813891 CACGGAACATGCTAAGCG 813874 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 79074870849480