Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Taiwanofungus_20camphoratus_20[genbank_20GCA_5F000766995.1_202014- 10-15] 360 sequences; 32,155,604 total letters Query= NC_008168.1 Length=104710 Score E Sequences producing significant alignments: (Bits) Value seq2 140 2e-28 seq35 125 5e-24 seq328 116 2e-21 seq223 96.9 2e-15 >seq2 Length=1168275 Score = 140 bits (154), Expect = 2e-28 Identities = 88/95 (93%), Gaps = 5/95 (5%) Strand=Plus/Minus Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGT 25956 |||||||||||||||||||||||||||||||||||||||||||| || |||||||| Sbjct 1163707 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGGACAGTGGGAATCTCGT 1163648 Query 25957 TAATCCTTTCATGCGCGTCACTAATTAGATGACGA 25991 |||||| |||||||||||||||||||||||||||| Sbjct 1163647 TAATCCATTCATGCGCGTCACTAATTAGATGACGA 1163613 Score = 98.7 bits (108), Expect = 7e-16 Identities = 68/77 (88%), Gaps = 0/77 (0%) Strand=Plus/Minus Query 19947 CTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCGC 20006 |||||| | |||||| ||||||| |||||||||||||||||||||| ||||||||||| | Sbjct 1161701 CTCTCTTTCCAAAGTGCTTTTCATCTTTCCCTCACGGTACTTGTTCACTATCGGTCTCTC 1161642 Query 20007 GGTAATATTTAGCCTTA 20023 | |||||||||| ||| Sbjct 1161641 GCCAATATTTAGCTTTA 1161625 >seq35 Length=937232 Score = 125 bits (138), Expect = 5e-24 Identities = 185/262 (71%), Gaps = 0/262 (0%) Strand=Plus/Minus Query 6232 CCAAGGTCGAGGGTAAGGGAAACGGTATTAAAACCGTCATTGTCAACATGCCTGAAGTCG 6291 ||||| |||| || ||||| || ||||| |||||||||||| |||||| | || || | Sbjct 442450 CCAAGATCGAAGGCAAGGGCAATGGTATCAAAACCGTCATTCCGAACATGTCCGATGTTG 442391 Query 6292 CTAAGGCGCTCGGACGCCCTGCCACCTACCCGACGAAATATTTCGGGTGCGAACTTGGCG 6351 | ||||||| | | || |||| || || || || | ||||| ||||||||||| | Sbjct 442390 CCCGGGCGCTCAGCAGGCCGCCCACGTATCCCACCAAGTTCTTCGGCTGCGAACTTGGTG 442331 Query 6352 CTCAGACGCAGTTTGATCACAAAAACGAGCGCTTCATCGTTAACGGATCGCATAACTCTG 6411 | |||||| || || | || ||||| || ||||| || ||||| | || | || Sbjct 442330 CGCAGACGTCCTTCGACGAGAAGAACGACCGTTTCATTGTCAACGGCGCACACGATGCTA 442271 Query 6412 CCAAGCTGCAGGACTTACTTGACGGCTTTATTCGCAAGTTTGTGCTGTGTCGGGAATGCG 6471 | ||||| | || ||||||| || || || |||||| ||||| || | |||| Sbjct 442270 CGAAGCTACGTGAGCTACTTGATGGTTTCATCGACAAGTTCGTGCTATGCAAGTCATGCA 442211 Query 6472 ATAACCCGGAGACCGAGCTTAT 6493 | ||||| ||||| || || || Sbjct 442210 AGAACCCTGAGACAGACCTCAT 442189 >seq328 Length=1291088 Score = 116 bits (128), Expect = 2e-21 Identities = 153/211 (73%), Gaps = 1/211 (0%) Strand=Plus/Minus Query 38109 ACCAA-ATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAGACAAAACACGTTCGTCGTC 38167 ||||| ||| || ||||||||||| ||||||||||| ||||| | | ||| |||| || Sbjct 622591 ACCAAGATGGAGTGTGCTCTCCTTCTGAATATTGTAGTCAGAGAGAGTACGGCCGTCCTC 622532 Query 38168 TAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGGGGACGCCTTCTTTGTCCAT 38227 | || || ||||| || || | ||||||||||| | |||| |||||| |||||| Sbjct 622531 CAGCTGCTTGCCGGCGAAGATCAAACGTTGTTGATCAGGCGGGATGCCTTCCTTGTCCTG 622472 Query 38228 AATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCAACTTCTAATGTAATAGTTTT 38287 || || ||| ||||| | || ||||| | || || || | || ||||| || Sbjct 622471 TATCTTGGCCTTGACATTGTCGATGGTATCAGAAGACTCCACCTCAAGGGTGATAGTCTT 622412 Query 38288 ACCCGTCAAGGTTTTCACGAATATCTGCATG 38318 || ||||| || || ||||| ||||||||| Sbjct 622411 TCCAGTCAATGTCTTGACGAAAATCTGCATG 622381 Score = 100 bits (110), Expect = 2e-16 Identities = 160/230 (70%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 38088 TTACCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCA 38147 |||||||| | | ||| | ||| | ||| || ||||||||||| ||||| ||||||||| Sbjct 623171 TTACCACCGCGAAGACGGAGCACGAGATGGAGGGTGCTCTCCTTCTGAATGTTGTAATCA 623112 Query 38148 GACAAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAG 38207 || | | || |||| || | || || ||||| || || || || || || || | Sbjct 623111 GAAAGAGTGCGGCCGTCTTCCAGCTGCTTGCCGGCGAAGATCAGACGCTGCTGGTCAGGA 623052 Query 38208 GGGACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCA 38267 |||| || || ||||| ||| || || ||||| | || || || ||| Sbjct 623051 GGGATACCCTCCTTGTCTTGAATCTTCGCTTTGACATTGTCGATGGTGTCAGACGATTCC 622992 Query 38268 ACTTCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATATCTGCAT 38317 || || | || ||||| || |||||||| || |||||||| |||||||| Sbjct 622991 ACCTCAAGGGTGATAGTCTTCCCCGTCAACGTCTTCACGAAAATCTGCAT 622942 Score = 91.5 bits (100), Expect = 1e-13 Identities = 142/203 (70%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 38115 TGAAGAGTGCTCTCCTTTTGAATATTGTAATCAGACAAAACACGTTCGTCGTCTAATTGT 38174 || |||||||||||||| ||||||||||| || || | | || |||| || || ||| Sbjct 622306 TGCAGAGTGCTCTCCTTCTGAATATTGTAGTCGGAAAGAGTGCGGCCGTCCTCCAACTGT 622247 Query 38175 TTTCCGGCAAATATTAGGCGTTGTTGATCGGAGGGGACGCCTTCTTTGTCCATAATTTTT 38234 || || || || || || || || ||||||| || | ||| || ||||| || || Sbjct 622246 TTGCCAGCGAAGATAAGACGCTGCTGATCGGGAGGAATGCCCTCCTTGTCTTGGATCTTC 622187 Query 38235 TGCTTCACATTCTGGACAGTATCTCCACTTTCAACTTCTAATGTAATAGTTTTACCCGTC 38294 |||||| || | || || || | || || || | || ||||| || ||||| Sbjct 622186 GCCTTCACGTTATCGATGGTGTCAGAAGACTCCACCTCGAGCGTGATAGTCTTGCCCGTA 622127 Query 38295 AAGGTTTTCACGAATATCTGCAT 38317 | ||| || ||||| |||||||| Sbjct 622126 AGGGTCTTGACGAAGATCTGCAT 622104 >seq223 Length=1670925 Score = 96.9 bits (106), Expect = 2e-15 Identities = 138/192 (72%), Gaps = 2/192 (1%) Strand=Plus/Plus Query 38127 TCCTTTTGAATATTGTAATCAGACAAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAAT 38186 ||||| ||||||||||||||||||| || | || || | ||| ||||| ||||| Sbjct 1064915 TCCTTCTGAATATTGTAATCAGACAGCGTCCGGCCATCCTCAAGTTGCTTTCCAGCAAAG 1064974 Query 38187 ATTAGGCGTTGTTGATCGGAGGGGACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTC 38246 || || ||||| ||||| | |||| || || |||||| ||| ||| ||||| || Sbjct 1064975 ATCAGACGTTGCTGATCTGGAGGGATACCCTCCTTGTCCTGAATCTTTGCTTTCACGTTA 1065034 Query 38247 TGGACAGTATCTCCAC-TTTCAACTTCTAATGTAATAGTTTTACCCGTCAAGGTTTTCAC 38305 | || ||| || | || ||||| || | |||||| || || || || | || ||||| Sbjct 1065035 TCGATAGTGTC-CGACGACTCAACCTCAAGTGTAATCGTCTTGCCAGTGAGAGTCTTCAC 1065093 Query 38306 GAATATCTGCAT 38317 || |||||||| Sbjct 1065094 AAAAATCTGCAT 1065105 Score = 93.3 bits (102), Expect = 3e-14 Identities = 145/207 (70%), Gaps = 8/207 (4%) Strand=Plus/Plus Query 38115 TGAAGAGTGCTCTCCTTTTGAATATTGTAATCAGACAAAACACGTT----CGTCGTCTAA 38170 ||||| ||||||||||| |||||||| ||||| || | |||| | || || || Sbjct 1064166 TGAAGGGTGCTCTCCTTCTGAATATTATAATCCGAGA----GCGTTCTGCCATCCTCCAA 1064221 Query 38171 TTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGGGGACGCCTTCTTTGTCCATAAT 38230 ||||| || || || || | |||||| || || | |||| || || || ||| ||| Sbjct 1064222 CTGTTTCCCCGCGAAGATCAAGCGTTGCTGGTCAGGAGGGATACCCTCCTTATCCTGAAT 1064281 Query 38231 TTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCAACTTCTAATGTAATAGTTTTACC 38290 || ||||||||| | || || ||| || ||||| ||||| ||||| || || Sbjct 1064282 CTTCGCCTTCACATTGTCGATCGTGTCTGATGACTCCACTTCCAATGTGATAGTCTTGCC 1064341 Query 38291 CGTCAAGGTTTTCACGAATATCTGCAT 38317 ||| | |||||||| || || ||||| Sbjct 1064342 CGTAAGTGTTTTCACAAAAATTTGCAT 1064368 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 334945730419160