Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Taiwanofungus_20camphoratus_20[genbank_20GCA_5F000766995.1_202014- 10-15] 360 sequences; 32,155,604 total letters Query= NC_008291.1 Length=198050 Score E Sequences producing significant alignments: (Bits) Value seq306 170 2e-37 seq1 154 2e-32 >seq306 Length=1616116 Score = 170 bits (188), Expect = 2e-37 Identities = 376/561 (67%), Gaps = 6/561 (1%) Strand=Plus/Plus Query 32657 CAAACATGCGAAATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGAAAACGT 32716 |||||| || || ||| ||| | ||||| || | ||| || | || || || ||||| Sbjct 904147 CAAACACGCAAAGTCGGTGTGCATGCCCTCATCACGACTTATCAGCTCATTCGAGAACGT 904206 Query 32717 GAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGATCCAGAAAA 32776 || || ||||| ||||||||||| || ||||| || ||||||||||| || ||||| || Sbjct 904207 CAGACCAGGCATCAGGCCACGCTTCTTGAGCCAGAAAATGGACGCAAAGGACCCAGAGAA 904266 Query 32777 GAAAATTCCTTCTACTGCCGCAAAGGCAATAAGTCTCTCTCCATAACCGGCGCTGTCAT- 32835 |||||| || |||||||| |||||||||| |||| ||| || | | | | || Sbjct 904267 GAAAATGCCCTCTACTGCAGCAAAGGCAACGAGTCGCTCAGCAAATGTAGACTTCTTATC 904326 Query 32836 --GTATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATTGTCTCTATAGC 32893 |||||| ||||| || |||||||| || | |||||| || || || || || Sbjct 904327 CGAAATCCACCGCAATGCCCAGTCAGCCTTCTTCTTGATACAAGGGATGGTGTCAATGGC 904386 Query 32894 ATTAAAGAGATAGtttttttCATTACTATCTTTAACATATGTATCAATCAAAAGACTATA 32953 | |||||||| | | | | | || || | || ||||| || | ||| || Sbjct 904387 GTCAAAGAGATGTTCTCGCTGCTGAGGGTCCTTGATGTAAGTATCGATGAGAAGGGAGTA 904446 Query 32954 CATTTCCGAATGAATGTTTTCAATGGCCATTTGAAATCCGTAGAAGCATCTAGCCTCGGT 33013 | || || |||||||| || || || || || || |||||||||| || || | Sbjct 904447 TGTCTCGGAGTGAATGTTCTCCATCATGATCTGGAAGCCATAGAAGCATCGCGCTTCTGC 904506 Query 33014 AATCTGTACTTCTGTACAAAATCGTTCTGCTAAATTTTCATTCACTATTCCGTCACTGGC 33073 | |||||| || | | || || || | | ||| || || || || || || || Sbjct 904507 AGCCTGTACCTCATTGGAGAACCGCTCAACGAGATTCTCGTTGACAATGCCATCCGACGC 904566 Query 33074 TGCAAAAAACGCCAATACATGTTTTATAAAATATTTTTCGTC-TGGTGTTA--GTTTATT 33130 ||||| ||||| | ||||| | || | | | ||| | | || | | || || Sbjct 904567 AGCAAAGAACGCGAGAACATGCGAAAGGAAGTGTCTCTCGCCGTCGTTCAAGCGGTTGTT 904626 Query 33131 CCAATCATTGATATCTTTAGATATATCCACTTCTTCCACTGTCCAAAATGATGCCTCTGC 33190 ||| |||| | || || |||| || | || |||| ||||| || || ||||| || Sbjct 904627 CCAGTCATGCAGGTCCTTCGATAGGTCAATCTCCTCCATCGTCCAGAAAGAAGCCTCGGC 904686 Query 33191 CTTTTTATACATATTCCAGAT 33211 ||| |||||||| | |||||| Sbjct 904687 CTTCTTATACATCTGCCAGAT 904707 >seq1 Length=2218769 Score = 154 bits (170), Expect = 2e-32 Identities = 374/563 (66%), Gaps = 10/563 (2%) Strand=Plus/Minus Query 32657 CAAACATGCGAAATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGAAAACGT 32716 ||| ||||| || ||| || | ||||||||| | || || | || || || ||||| Sbjct 2184301 CAAGCATGCAAAGTCGGTATGCATACCCTCGTCACGGCTGATAAGCTCATTTGAGAACGT 2184242 Query 32717 GAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGATCCAGAAAA 32776 ||| || ||||| | ||| | ||| || ||||| || || || ||||| ||||| ||||| Sbjct 2184241 GAGACCAGGCATCAAGCCTCTCTTCTTCAGCCAGAAAATCGAGGCAAAAGATCCTGAAAA 2184182 Query 32777 GAAAATTCCTTCTACTGCCGCAAAGGCAATAAGTCTCTCTCCATAACCGGCGCTGTCATG 32836 ||| || || || || || || ||||||| || | ||| | | || | | || | Sbjct 2184181 GAAGATACCCTCAACAGCAGCGAAGGCAACGAGCCGCTCAGCGAA--CGCAGATTTCTGG 2184124 Query 32837 T-----ATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATTGTCTCTATA 32891 | |||||| | ||||| || |||||||| || | || || || || || ||| Sbjct 2184123 TCCGAGATCCACCGCAGCGCCCAGTCAGCCTTCTTCTTGATGCATGGAATAGTGTCAATA 2184064 Query 32892 GCATTAAAGAGATAGtttttttCATTACTATCTTTAACATATGTATCAATCAAAAGACTA 32951 |||| || || | | | | || || | || || || || | |||| Sbjct 2184063 GCATCGAAAAGGTGCTCCCGCTGCGCAGGGTCCTTGATGTAAGTGTCGATAAGAAGAGAG 2184004 Query 32952 TACATTTCCGAATGAATGTTTTCAATGGCCATTTGAAATCCGTAGAAGCATCTAGCCTCG 33011 || | || || |||||||| || || ||||| || ||||||||||| | |||||| Sbjct 2184003 TATGTCTCAGAGTGAATGTTCTCCATCATGATTTGGAAACCGTAGAAGCAGCGGGCCTCG 2183944 Query 33012 GTAATCTGTACTTCTGTACAAAATCGTTCTGCTAAATTTTCATTCACTATTCCGTCACTG 33071 | || ||| ||||| | | ||||| || | | || ||||| || || || || Sbjct 2183943 GCAACCTGCACTTCATTCGAGAATCGCTCAACAAGGTTCTCATTGACGATGCCATCCGAC 2183884 Query 33072 GCTGCAAAAAACGCCAATACATGTTTTATAAAATATTTTTCGTC-TGGT--GTTAGTTTA 33128 || ||||| || || | || || |||||| | |||| | | || || | || Sbjct 2183883 GCAGCAAAGAAAGCAAGAACGTGAGATATAAAGTGACGTTCGCCGTCGTTCATTCGGTTG 2183824 Query 33129 TTCCAATCATTGATATCTTTAGATATATCCACTTCTTCCACTGTCCAAAATGATGCCTCT 33188 ||||| |||| || || || || | ||| || || |||| |||||| || || ||||| Sbjct 2183823 TTCCAGTCATGGAGGTCCTTCGAGAGATCAACCTCCTCCATTGTCCAGAAGGAGGCCTCA 2183764 Query 33189 GCCTTTTTATACATATTCCAGAT 33211 |||||||| ||||| |||||| Sbjct 2183763 GCCTTTTTGTACATCCGCCAGAT 2183741 Score = 120 bits (132), Expect = 4e-22 Identities = 349/536 (65%), Gaps = 6/536 (1%) Strand=Plus/Plus Query 32682 CCCTCGTCTCTACTAATTAATTCGTTGGAAAACGTGAGTCCGGGCATTAGGCCACGCTTT 32741 |||||||| | |||| | || ||||| ||||| || || ||||| || || | || Sbjct 2182070 CCCTCGTCGCGGATAATCAGCTCATTGGAGAACGTCAGGCCAGGCATGAGACCCCTTTTC 2182129 Query 32742 TTAAGCCAAAATATGGACGCAAATGATCCAGAAAAGAAAATTCCTTCTACTGCCGCAAAG 32801 || ||||| |||||||| ||||| || || || ||||| || ||||| || ||||| || Sbjct 2182130 TTGAGCCAGAATATGGATGCAAAGGAGCCGGAGAAGAATATGCCTTCGACAGCCGCGAAA 2182189 Query 32802 GCAATAAGTCTCTCTCCATAACCGG---CGCTGTCATGTATCCACTTTTGAGCCCAATCG 32858 || | ||| | ||| | | || | ||||| ||||| | ||||| || Sbjct 2182190 GCGACAAGCCGCTCCGCGAACGTGGATTCCTTGTCAGAAATCCATCGCAGTGCCCAGTCA 2182249 Query 32859 GCCTTCTTTTTTACACAAGGCATTGTCTCTATAGCATTAAAGAGATAGtttttttCATTA 32918 ||||| ||||| | ||| || || ||||| || |||| || | || || || | Sbjct 2182250 GCCTTTTTTTTAATACATGGGATGGTCTCGATCGCATCGAACAAATGGTCCCGTTGTTGT 2182309 Query 32919 CTATCTTTAACATATGTATCAATCAAAAGACTATACATTTCCGAATGAATGTTTTCAATG 32978 || || | ||||| ||||| | ||| || | || ||||||||||| || || Sbjct 2182310 TGGTCCTTGATGTATGTGTCAATGAGCAGAGAGTATGTCTCGGAATGAATGTTCTCCATC 2182369 Query 32979 GCCATTTGAAATCCGTAGAAGCATCTAGCCTCGGTAATCTGTACTTCTGTACAAAATCGT 33038 || || || ||||| ||||| | ||||| | | || ||||| | |||| || Sbjct 2182370 ATAATCTGGAAGCCGTAAAAGCAGCGCGCCTCAGCGACTTGCACTTCGTTTGAAAAGCGC 2182429 Query 33039 TCTGCTAAATTTTCATTCACTATTCCGTCACTGGCTGCAAAAAACGCCAATACATGTTTT 33098 || | | ||| || ||||| || || || | | || || || || | ||||| Sbjct 2182430 TCCACGAGATTCTCGTTCACAATGCCATCGGAGCCAGCGAAGAAGGCAAGAACATGAGAG 2182489 Query 33099 ATAAAATATTTTTCGTCTGGTGTTA---GTTTATTCCAATCATTGATATCTTTAGATATA 33155 ||||| || ||||| | | | || | ||| || |||||| | || | Sbjct 2182490 ATAAAGTACCGCTCGTCATCATTCAAACGCTTTTCCCAGTCCCAGATATCATGCGAGAGG 2182549 Query 33156 TCCACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTTTTTATACATATTCCAGAT 33211 || | ||||| | ||||| || || |||||||| || || ||||| ||||||| Sbjct 2182550 TCAATCTCTTCTGCAGTCCAGAAGGAGGCCTCTGCTTTCTTGTACATCCTCCAGAT 2182605 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 633629148656000