Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Taiwanofungus_20camphoratus_20[genbank_20GCA_5F000766995.1_202014- 10-15] 360 sequences; 32,155,604 total letters Query= NC_008293.1 Length=135454 Score E Sequences producing significant alignments: (Bits) Value seq223 140 3e-28 seq328 109 5e-19 >seq223 Length=1670925 Score = 140 bits (154), Expect = 3e-28 Identities = 163/215 (76%), Gaps = 4/215 (2%) Strand=Plus/Minus Query 24998 AATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTC 25057 |||||| |||||||| ||||| | || || || ||||||| |||| || |||||||| Sbjct 1065334 AATGCAGATATTTGTGAAGACCCTCACGGGCAAGACCATCACGCTCGAGGTCGAGTCGTC 1065275 Query 25058 TGACACTATCGAGTCAC-TGAAG-CAAAAAATCACTGACAAAGAAGGGATTCCACCTGAC 25115 |||||| ||||| | || | ||| | || | ||| ||||| || || ||||| |||||| Sbjct 1065274 TGACACAATCGA-TAACGTCAAGGCCAAGATTCAG-GACAAGGAGGGTATTCCCCCTGAC 1065217 Query 25116 CAACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTAC 25175 |||||||| | ||||| || || || || | || |||| |||||| || ||||||| Sbjct 1065216 CAACAGCGTCTCATTTTCGCTGGAAAGCAGCTCGAGGATGGTCGCACGTTGTCCGATTAC 1065157 Query 25176 AATATTCAAAAAGAATCCACGCTACATTTAGTGCT 25210 || ||||| || |||||||| ||||| | || || Sbjct 1065156 AACATTCAGAAGGAATCCACTTTACATCTGGTCCT 1065122 Score = 105 bits (116), Expect = 6e-18 Identities = 165/231 (71%), Gaps = 4/231 (2%) Strand=Plus/Minus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 |||||||| ||||| ||||| | ||||| || ||||||| | || || ||||| || Sbjct 1064596 ATGCAAATTTTTGTGAAGACGCTTACCGGCAAGACCATCACGTTGGAGGTCGAGTCATCA 1064537 Query 25059 GACACTATCGAGTCAC-TGAAG-CAAAAAATCACTGACAAAGAAGGGATTCCACCTGACC 25116 ||||| ||||| | || ||||| |||| | ||| || || ||||| ||||| || |||| Sbjct 1064536 GACACGATCGA-TAACGTGAAGGCAAAGATTCAG-GATAAGGAAGGCATTCCGCCAGACC 1064479 Query 25117 AACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACA 25176 ||||||| | || || || ||||| || | || || | | | || | ||||||| Sbjct 1064478 AACAGCGCTTGATCTTCGCTGGCAAGCAGCTCGAGGACGGTAGAACGCTCTCGGATTACA 1064419 Query 25177 ATATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGGCTAAGAGGAGGAA 25227 ||||||| || || || || || || | || || | || | ||||||| Sbjct 1064418 ATATTCAGAAGGAGTCGACTCTTCACCTCGTTCTTCGTCTTCGCGGAGGAA 1064368 Score = 104 bits (114), Expect = 2e-17 Identities = 149/205 (73%), Gaps = 4/205 (2%) Strand=Plus/Minus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 ||||| || ||||| |||||| | || || || | || ||| | || || |||||||| Sbjct 1065105 ATGCAGATTTTTGTGAAGACTCTCACTGGCAAGACGATTACACTTGAGGTTGAGTCGTCG 1065046 Query 25059 GACACTATCGAGTCAC-TGAA-GCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACC 25116 ||||||||||| | || |||| ||||| | ||| ||||| || || || || || || | Sbjct 1065045 GACACTATCGA-TAACGTGAAAGCAAAGATTCAG-GACAAGGAGGGTATCCCTCCAGATC 1064988 Query 25117 AACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACA 25176 | || || | || ||||| || || ||| | || |||| || || || ||||||| Sbjct 1064987 AGCAACGTCTGATCTTTGCTGGAAAGCAACTTGAGGATGGCCGGACGCTGTCTGATTACA 1064928 Query 25177 ATATTCAAAAAGAATCCACGCTACA 25201 ||||||| || ||||| || || || Sbjct 1064927 ATATTCAGAAGGAATCTACCCTTCA 1064903 Score = 82.4 bits (90), Expect = 7e-11 Identities = 139/199 (70%), Gaps = 2/199 (1%) Strand=Plus/Minus Query 24992 CGGAACAATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGA 25051 |||| ||||||||| ||||| || || | || || || | |||||| | |||||||| Sbjct 1064375 CGGAGGAATGCAAATTTTTGTGAAAACACTTACGGGCAAGACTATCACATTGGAAGTGGA 1064316 Query 25052 GTCGTCTGACACTATCGAGTCACTGAA-GCAAAAAATCACTGACAAAGAAGGGATTCCAC 25110 ||| || ||||| ||||| |||| || || | ||| || || || || || || | Sbjct 1064315 GTCATCAGACACGATCGACAATGTGAAGGCGAAGATTCA-GGATAAGGAGGGTATCCCTC 1064257 Query 25111 CTGACCAACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCG 25170 ||||||| || || | || || || || ||||| || || |||| | || | | Sbjct 1064256 CTGACCAGCAACGCTTGATCTTCGCGGGGAAACAGTTGGAGGATGGCAGAACGCTCTCGG 1064197 Query 25171 ATTACAATATTCAAAAAGA 25189 |||| |||||||| || || Sbjct 1064196 ATTATAATATTCAGAAGGA 1064178 >seq328 Length=1291088 Score = 109 bits (120), Expect = 5e-19 Identities = 155/215 (72%), Gaps = 6/215 (3%) Strand=Plus/Plus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 ||||| || || || ||||| ||||| || || | ||||| | || ||||| |||||| Sbjct 622942 ATGCAGATTTTCGTGAAGACGTTGACGGGGAAGACTATCACCCTTGAGGTGGAATCGTCT 623001 Query 25059 GACACTATCGAGTCACTG---AAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGAC 25115 ||||| ||||| || || |||| || | ||| ||||| || || || || |||||| Sbjct 623002 GACACCATCGA--CAATGTCAAAGCGAAGATTCA-AGACAAGGAGGGTATCCCTCCTGAC 623058 Query 25116 CAACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTAC 25175 || ||||| | || || |||||||| || | ||||| | |||||| | |||||| Sbjct 623059 CAGCAGCGTCTGATCTTCGCCGGCAAGCAGCTGGAAGACGGCCGCACTCTTTCTGATTAC 623118 Query 25176 AATATTCAAAAAGAATCCACGCTACATTTAGTGCT 25210 || ||||| || || ||| || ||| | ||||| Sbjct 623119 AACATTCAGAAGGAGAGCACCCTCCATCTCGTGCT 623153 Score = 105 bits (116), Expect = 6e-18 Identities = 140/192 (73%), Gaps = 2/192 (1%) Strand=Plus/Plus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 ||||| || || || ||||| | || || || | ||||| |||| |||||||| ||| Sbjct 622104 ATGCAGATCTTCGTCAAGACCCTTACGGGCAAGACTATCACGCTCGAGGTGGAGTCTTCT 622163 Query 25059 GACACTATCGAGTCAC-TGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCA 25117 ||||| ||||| | || ||||| || ||| ||||| || || ||||| || || || Sbjct 622164 GACACCATCGA-TAACGTGAAGGCGAAGATCCAAGACAAGGAGGGCATTCCTCCCGATCA 622222 Query 25118 ACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAA 25177 ||||| |||| || || |||||||| || || || | |||||| | ||| ||||| Sbjct 622223 GCAGCGTCTTATCTTCGCTGGCAAACAGTTGGAGGACGGCCGCACTCTTTCCGACTACAA 622282 Query 25178 TATTCAAAAAGA 25189 |||||| || || Sbjct 622283 TATTCAGAAGGA 622294 Score = 82.4 bits (90), Expect = 7e-11 Identities = 143/206 (69%), Gaps = 4/206 (2%) Strand=Plus/Plus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 ||||| || || || ||||| ||||| || || | ||||| | || |||||||| ||| Sbjct 622382 ATGCAGATTTTCGTCAAGACATTGACTGGAAAGACTATCACCCTTGAGGTGGAGTCTTCT 622441 Query 25059 GACACTATCGAGTCACTG--AAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACC 25116 || || ||||| || || ||| || || ||||| ||||| || || ||||| | Sbjct 622442 GATACCATCGA--CAATGTCAAGGCCAAGATACAGGACAAGGAAGGCATCCCGCCTGATC 622499 Query 25117 AACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACA 25176 |||| || | || || |||||||| || | || || | || ||| | || |||| Sbjct 622500 AACAACGTTTGATCTTCGCCGGCAAGCAGCTGGAGGACGGCCGTACTCTCTCTGACTACA 622559 Query 25177 ATATTCAAAAAGAATCCACGCTACAT 25202 ||||||| || || ||| || ||| Sbjct 622560 ATATTCAGAAGGAGAGCACACTCCAT 622585 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 433326098773400