Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Taiwanofungus_20camphoratus_20[genbank_20GCA_5F000766995.1_202014- 10-15] 360 sequences; 32,155,604 total letters Query= NC_008586.1 Length=131204 Score E Sequences producing significant alignments: (Bits) Value seq328 134 1e-26 seq223 114 1e-20 seq1 86.0 5e-12 >seq328 Length=1291088 Score = 134 bits (148), Expect = 1e-26 Identities = 167/229 (73%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 22218 GATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCAC 22277 |||||| ||||| || || || || || || || || |||| ||||| |||||| | | Sbjct 622941 GATGCAGATTTTCGTGAAGACGTTGACGGGGAAGACTATCACCCTTGAGGTGGAATCGTC 623000 Query 22278 CGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCA 22337 || ||| | ||| || ||||| || |||||||||||||||||||| || || || || Sbjct 623001 TGACACCATCGACAATGTCAAAGCGAAGATTCAAGACAAGGAGGGTATCCCTCCTGACCA 623060 Query 22338 ACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAA 22397 || ||||| || || |||||||| ||| | || || |||||| | || |||||||| Sbjct 623061 GCAGCGTCTGATCTTCGCCGGCAAGCAGCTGGAAGACGGCCGCACTCTTTCTGATTACAA 623120 Query 22398 CATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGT 22446 |||||| || || |||| | ||| | || | || | ||||| ||| Sbjct 623121 CATTCAGAAGGAGAGCACCCTCCATCTCGTGCTCCGTCTTCGCGGTGGT 623169 Score = 111 bits (122), Expect = 1e-19 Identities = 139/191 (73%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| ||||| || || || || || || || || |||| ||||| ||||| | | Sbjct 622382 ATGCAGATTTTCGTCAAGACATTGACTGGAAAGACTATCACCCTTGAGGTGGAGTCTTCT 622441 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 |||||| | ||| || |||| || || || |||||||| || || || || |||||| Sbjct 622442 GATACCATCGACAATGTCAAGGCCAAGATACAGGACAAGGAAGGCATCCCGCCTGATCAA 622501 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 |||||| | || || |||||||| ||| | ||||| ||| || |||| || ||||| Sbjct 622502 CAACGTTTGATCTTCGCCGGCAAGCAGCTGGAGGACGGCCGTACTCTCTCTGACTACAAT 622561 Query 22399 ATTCAAAAAGA 22409 ||||| || || Sbjct 622562 ATTCAGAAGGA 622572 Score = 107 bits (118), Expect = 2e-18 Identities = 139/192 (72%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 22218 GATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCAC 22277 |||||| || || || || || | || || || || |||| || || ||||| | | Sbjct 622103 GATGCAGATCTTCGTCAAGACCCTTACGGGCAAGACTATCACGCTCGAGGTGGAGTCTTC 622162 Query 22278 CGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCA 22337 || ||| | || | | || || || |||||||||||||| ||||| |||||||| Sbjct 622163 TGACACCATCGATAACGTGAAGGCGAAGATCCAAGACAAGGAGGGCATTCCTCCCGATCA 622222 Query 22338 ACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAA 22397 || |||||||| || || ||||||||||| ||||| |||||| | ||||| ||||| Sbjct 622223 GCAGCGTCTTATCTTCGCTGGCAAACAGTTGGAGGACGGCCGCACTCTTTCCGACTACAA 622282 Query 22398 CATTCAAAAAGA 22409 ||||| || || Sbjct 622283 TATTCAGAAGGA 622294 Score = 105 bits (116), Expect = 6e-18 Identities = 138/191 (72%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| || || || || ||| | || || || ||| ||||||| || || ||| | | Sbjct 622661 ATGCAGATCTTCGTCAAGACTCTTACGGGCAAGACGATCACTCTCGAGGTCGAATCATCT 622720 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 |||||| | ||| | | || || ||||||||||||||||||||||| || || || Sbjct 622721 GATACCATCGACAACGTTAAGGCGAAGATTCAAGACAAGGAGGGTATTCCTCCTGACCAG 622780 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || || || || || || ||||| ||| | |||||| || || |||| || |||||| Sbjct 622781 CAGCGCCTGATCTTCGCTGGCAAGCAGCTGGAGGATGGTCGTACACTCTCGGACTACAAC 622840 Query 22399 ATTCAAAAAGA 22409 || || || || Sbjct 622841 ATCCAGAAGGA 622851 >seq223 Length=1670925 Score = 114 bits (126), Expect = 1e-20 Identities = 144/198 (73%), Gaps = 0/198 (0%) Strand=Plus/Minus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| |||||||| || ||| | || || || ||| | || ||||| || || | | Sbjct 1065105 ATGCAGATTTTTGTGAAGACTCTCACTGGCAAGACGATTACACTTGAGGTTGAGTCGTCG 1065046 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || || | || | | ||| ||| ||||| |||||||||||||| || || ||||| Sbjct 1065045 GACACTATCGATAACGTGAAAGCAAAGATTCAGGACAAGGAGGGTATCCCTCCAGATCAG 1064986 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 |||||||| || ||||| || || || | |||||| ||| || | || |||||||| Sbjct 1064985 CAACGTCTGATCTTTGCTGGAAAGCAACTTGAGGATGGCCGGACGCTGTCTGATTACAAT 1064926 Query 22399 ATTCAAAAAGAATCCACC 22416 ||||| || ||||| ||| Sbjct 1064925 ATTCAGAAGGAATCTACC 1064908 Score = 114 bits (126), Expect = 1e-20 Identities = 162/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| || ||||| || || | || || || || |||| || || || || | | Sbjct 1065333 ATGCAGATATTTGTGAAGACCCTCACGGGCAAGACCATCACGCTCGAGGTCGAGTCGTCT 1065274 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || || | || | |||| || ||||| ||||||||||||||||| || || ||| Sbjct 1065273 GACACAATCGATAACGTCAAGGCCAAGATTCAGGACAAGGAGGGTATTCCCCCTGACCAA 1065214 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || ||||| || || || || || ||| | |||||| ||||| | |||||||||||| Sbjct 1065213 CAGCGTCTCATTTTCGCTGGAAAGCAGCTCGAGGATGGTCGCACGTTGTCCGATTACAAC 1065154 Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGT 22446 ||||| || |||||||| ||||| | || | || | ||||| ||| Sbjct 1065153 ATTCAGAAGGAATCCACTTTACATCTGGTCCTTCGTCTCCGCGGTGGT 1065106 Score = 98.7 bits (108), Expect = 8e-16 Identities = 152/217 (70%), Gaps = 0/217 (0%) Strand=Plus/Minus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 |||||||||||||| ||||| | || || || || |||| | |||||||| | | Sbjct 1064368 ATGCAAATTTTTGTGAAAACACTTACGGGCAAGACTATCACATTGGAAGTGGAGTCATCA 1064309 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || || | ||| || | || || ||||| || ||||||||||| || || || || Sbjct 1064308 GACACGATCGACAATGTGAAGGCGAAGATTCAGGATAAGGAGGGTATCCCTCCTGACCAG 1064249 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 ||||| | || || || || |||||||| |||||| | | || |||| ||||| || Sbjct 1064248 CAACGCTTGATCTTCGCGGGGAAACAGTTGGAGGATGGCAGAACGCTCTCGGATTATAAT 1064189 Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGAT 22435 ||||| || || |||| | || | | |||| ||| Sbjct 1064188 ATTCAGAAGGAGAGCACCCTTCACCTCGGTTTGTGAT 1064152 >seq1 Length=2218769 Score = 86.0 bits (94), Expect = 5e-12 Identities = 111/151 (74%), Gaps = 2/151 (1%) Strand=Plus/Minus Query 117067 TCGCTTTCGCCATTGTCGAAGGCATTTTCTTTTCAGGCAGTTTTGCTGCCATATTTTTTA 117126 |||||||||| |||||||||||| ||||| || ||| ||||| ||||||| | Sbjct 2182193 TCGCTTTCGCGGCTGTCGAAGGCATATTCTTCTCCGGCTCCTTTGCATCCATATTCTGGC 2182134 Query 117127 TCAAGACCAAAGGTCTAATGCCGGGTCTAACGTTTAGCAACGAATTAAT-ATCGCGTGAC 117185 |||||| | ||||| ||||| || || ||||| ||| || | || ||| || ||| Sbjct 2182133 TCAAGAAAAGGGGTCTCATGCCTGGCCTGACGTTCTCCAATGAGCTGATTATC-CGCGAC 2182075 Query 117186 GAAGGTTTACACACCGATTTTGCGTGCATGT 117216 || || | || || |||||||||||| ||| Sbjct 2182074 GAGGGAATGCATACTGATTTTGCGTGCCTGT 2182044 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 419726158443400