Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Taiwanofungus_20camphoratus_20[genbank_20GCA_5F000766995.1_202014- 10-15] 360 sequences; 32,155,604 total letters Query= NC_008603.1 Length=321240 Score E Sequences producing significant alignments: (Bits) Value seq306 113 9e-20 seq112 98.7 2e-15 seq35 95.1 2e-14 >seq306 Length=1616116 Score = 113 bits (124), Expect = 9e-20 Identities = 140/192 (73%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 251544 ATATTCAGATACACGGCGTTCGAAGAAATTAGACTTGCCCTCCAGAGAGATTAGCTCCAT 251603 ||| ||||||||||| |||||||| || | ||| || | || ||||| | ||||| Sbjct 903814 ATAATCAGATACACGCTTCTCGAAGAAGTTGGTCTTCCCTTGCAATGAGATCATGTCCAT 903873 Query 251604 GAAGTCGAAGGGGTTTGTGGCATTGTACTGCTTGGGATGGCCAAGTGCTACGAAGATGCG 251663 |||||| |||||||| |||| |||||| ||| |||| || ||||| | | | || Sbjct 903874 GAAGTCAAAGGGGTTCGTGGAATTGTAGATCTTCGGATCACCGAGTGCGAAAACCAATCG 903933 Query 251664 GTCTGCCACAAACTCCAGATACTGTCCCATCAGTTCAGAGTTCATGCCAATCATACGACA 251723 ||| || |||||||| | ||||| | ||| |||| | |||||||||||| | ||| Sbjct 903934 GTCCGCGACAAACTCAATGTACTGGCACATGAGTTTCGCGTTCATGCCAATGAGCGCACA 903993 Query 251724 AGGAATTGCCTC 251735 ||| | ||| || Sbjct 903994 AGGCAGTGCATC 904005 Score = 91.5 bits (100), Expect = 3e-13 Identities = 221/329 (67%), Gaps = 7/329 (2%) Strand=Plus/Plus Query 251844 GTGCAGACCCTCGTCGCGACTGATGAACTCGTTGGACAGACCCAGGCCAGGCATCACCCC 251903 ||||| ||||| || ||||| || | ||| || || | ||| |||||||||| || Sbjct 904165 GTGCATGCCCTCATCACGACTTATCAGCTCATTCGAGAACGTCAGACCAGGCATCAGGCC 904224 Query 251904 ACGGTTCCTGAGCCAGAAGATTG-CGCAAAAGGATCCAGAGAACAGCAGACCCTCGACAC 251962 ||| ||| |||||||||| || | |||||| ||| |||||||| | | ||||| || Sbjct 904225 ACGCTTCTTGAGCCAGAAAATGGACGCAAA-GGACCCAGAGAAGAAAATGCCCTCTACTG 904283 Query 251963 ACACCCATGCAACAAGGCGCTCAGCAAA---CGACTTGTCCTGCGACAAGAACTTCTGTG 252019 | | ||||| || ||||||||||| ||||| | | ||| | || | || Sbjct 904284 CAGCAAAGGCAACGAGTCGCTCAGCAAATGTAGACTTCTTATCCGAAATCCACCGCAATG 904343 Query 252020 CCCATGCTGCCTTCTTTCCAACCGCGGGGATTGTTTCGATTGCATCAAAGAGAGAGTTC- 252078 |||| | |||||||| | ||||| || || || || ||||||||| |||| Sbjct 904344 CCCAGTCAGCCTTCTTCTTGATACAAGGGATGGTGTCAATGGCGTCAAAGAGA-TGTTCT 904402 Query 252079 CGCTCGGCATCGTCCTCGATGAGCGCATCAAGCAGGAGAGAGTACATCTCCGAATGGATG 252138 |||| | ||||| |||| | ||| | || || ||||| |||| || || ||| Sbjct 904403 CGCTGCTGAGGGTCCTTGATGTAAGTATCGATGAGAAGGGAGTATGTCTCGGAGTGAATG 904462 Query 252139 GATTCGTTGAACATCTGGTAAGCATAGAA 252167 || | | |||||| | ||||||| Sbjct 904463 TTCTCCATCATGATCTGGAAGCCATAGAA 904491 >seq112 Length=2086521 Score = 98.7 bits (108), Expect = 2e-15 Identities = 151/215 (70%), Gaps = 3/215 (1%) Strand=Plus/Plus Query 280168 TTGGTGTCATTGGACCCAATGGTGCGGGTAAGTCTACCCTAATCAAAGTCCTGACTGGCG 280227 ||| ||| |||| ||||| ||| | || |||||||| || |||| | || | ||||| Sbjct 1814878 TTGCTGTTCTTGGTCCCAACGGTTCCGGCAAGTCTACGCTCGTCAAGCTTCTCATTGGCG 1814937 Query 280228 AGACCCAGGCCACTGAGGGGTCCG---TTTGGAAGCATCCCAACATGCGGATGGCTTACG 280284 | | ||| |||| || | |||||||| || ||| || || | ||||| Sbjct 1814938 ACTTGGAACCCAACAAGGGTGGCGAGATCTGGAAGCACCCTAACTTGGTTATCGGTTACG 1814997 Query 280285 TCGCTCAGCACGCTTTCCACCACATCGAGAACCACCTGGACATGACTCCTAACCAATACA 280344 | ||||||||||| ||||||||||| || || || || |||| |||||| | | |||| Sbjct 1814998 TTGCTCAGCACGCATTCCACCACATTGATAATCATCTCGACAAGACTCCCCTCGAGTACA 1815057 Query 280345 TTCAGTGGCGCTATGCAAGTGGGCAGGATCTGGAG 280379 | |||||| ||| || ||| ||||| ||||| Sbjct 1815058 TGTTGTGGCGTTATCAAACTGGTGAGGATTTGGAG 1815092 >seq35 Length=937232 Score = 95.1 bits (104), Expect = 2e-14 Identities = 235/356 (66%), Gaps = 8/356 (2%) Strand=Plus/Minus Query 218654 TTAAGGTCGCTCAGTTTTCTGGTTATGTATCCGAAATTTCTGGCTACCATCACGGTGAGC 218713 ||||||| || ||| | | ||||| ||||| ||| || ||||||||||| |||| Sbjct 362701 TTAAGGTTGCGCAGCTCACCGGTTACGTATCTGAACACGCTCAGTACCATCACGGAGAGC 362642 Query 218714 AGAGTCTGCAGGGTGCCATTGTAGGCATGGCACAGGACTATGTGGGCAGTAACAACATGA 218773 ||||| || | |||| || | || ||||||| ||| || | |||||||||| Sbjct 362641 AGAGTTTGGTGATGACCATCGTGAATTTAGCCCAGGACTTTGTTGGAGGAAACAACATGA 362582 Query 218774 ACTTGCTGCTCCCCAACGGTCAGTTTGGTTCTCGTCTATTGGGTGGAAAGGATAGTGCTT 218833 | ||||| | |||||||||||||| ||| ||||| ||| || || || || | Sbjct 362581 ATCTGCTGATGCCCAACGGTCAGTTCGGTACTCGTGACCAGGGCGGTAAAGACCACGCCT 362522 Query 218834 CTGCCAGGTATATCTTTACAAAGTTGTCGCCCGTGACGCGCCAGGTGTTCAATCAGGCCG 218893 |||| ||||| || || || | || |||| | || || | | ||| ||| | | Sbjct 362521 CTGCGAGGTACATTTTCACGGAACTGGCGCCGATTACCCGAACGCTATTCCATCCTGGAG 362462 Query 218894 ATGATGTGCTCCTT----AAGTATCTTGAGGACGATGGTTCTTCGATTGAGCCCGAGTGG 218949 | || | |||| || || | | || ||||| |||||| || |||||| Sbjct 362461 ACGA----CCCCTTGATGAATTACCAGAAAGAAGATGGCCACATGATTGAACCTGAGTGG 362406 Query 218950 TATGTGCCTGCTATTCCGTTTTTGCTCGTAAATGGTGCCAATGGTATCGGGACAGG 219005 ||| ||||| | ||||| | | || | ||||| || | ||||| || || || Sbjct 362405 TATATGCCTATTGTTCCGATGGTTCTTATCAATGGAGCTGAAGGTATAGGCACTGG 362350 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1027832059102760