Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Taiwanofungus_20camphoratus_20[genbank_20GCA_5F000766995.1_202014- 10-15] 360 sequences; 32,155,604 total letters Query= NC_009899.1 Length=344691 Score E Sequences producing significant alignments: (Bits) Value seq306 127 5e-24 seq1 98.7 2e-15 seq168 89.7 1e-12 >seq306 Length=1616116 Score = 127 bits (140), Expect = 5e-24 Identities = 145/192 (76%), Gaps = 2/192 (1%) Strand=Plus/Minus Query 243561 GCTTATTGGCATGAACTCTGAACTCATGGGACAGTACATCGAATTCGTAGCCGACCGCAT 243620 ||| |||||||||||| | |||||||| | |||||||| || || || || ||||| | Sbjct 903988 GCTCATTGGCATGAACGCGAAACTCATGTGCCAGTACATTGAGTTTGTCGCGGACCGATT 903929 Query 243621 TTTCATCGCGCTTGGTTATGAGAAAGTGTACAACTCCAAGAACCCCTTTGCCTTTATGGA 243680 | |||| || ||| || ||| | ||||| |||| ||||||||||| ||| ||||| Sbjct 903928 GGTTTTCGCACTCGGTGATCCGAAGATCTACAATTCCACGAACCCCTTTGACTTCATGGA 903869 Query 243681 GCTCATTTCGCTTCAAGGGAAAACTAACTTCTTCGAAAAGCGTGTCAGTGATTAT-CAAC 243739 | || || | |||||||| || ||||||||||| |||||||| ||||||| | | Sbjct 903868 CATGATCTCATTGCAAGGGAAGACCAACTTCTTCGAGAAGCGTGTATCTGATTATGCGAA 903809 Query 243740 GCCCTGGTGTGA 243751 | ||||||||| Sbjct 903808 G-GCTGGTGTGA 903798 >seq1 Length=2218769 Score = 98.7 bits (108), Expect = 2e-15 Identities = 126/174 (72%), Gaps = 0/174 (0%) Strand=Plus/Plus Query 243553 CCATGCCGGCTTATTGGCATGAACTCTGAACTCATGGGACAGTACATCGAATTCGTAGCC 243612 || ||| ||| || ||||||||| || | |||||| | ||||| || || ||||| || Sbjct 2184448 CCTTGCGCGCTCATCGGCATGAACGCTAAGCTCATGTGCCAGTATATTGAGTTCGTCGCA 2184507 Query 243613 GACCGCATTTTCATCGCGCTTGGTTATGAGAAAGTGTACAACTCCAAGAACCCCTTTGCC 243672 ||| | | | || | || || | || |||||| || | | ||| || || | | Sbjct 2184508 GACAGGTTGATTGTCACCCTCGGCGACCCAAAGGTGTACCACGCAACGAATCCTTTCGAC 2184567 Query 243673 TTTATGGAGCTCATTTCGCTTCAAGGGAAAACTAACTTCTTCGAAAAGCGTGTC 243726 |||||||| | || |||||||| ||||| || ||||||||||| ||||||||| Sbjct 2184568 TTTATGGACATGATCTCGCTTCAGGGGAAGACAAACTTCTTCGAGAAGCGTGTC 2184621 >seq168 Length=500493 Score = 89.7 bits (98), Expect = 1e-12 Identities = 194/288 (67%), Gaps = 12/288 (4%) Strand=Plus/Plus Query 68405 CCAAGCGTCTTCGTCAGAGTTGTATGGAAAAGTGCAAGAAATTCCTCAGACGGAAAATAC 68464 ||| ||||| | ||||||||||| ||||| || || | || |||| || | || Sbjct 380861 CCAGGCGTCGACTTCAGAGTTGTACGGAAAGGTTGTCGAGACACCACAGAGCGAGACGAC 380920 Query 68465 TCCGTTTTATCCTCGAAGCCCTTACGGTGTTGCAAAGTTGTACGCTTATTGGAT--CTGT 68522 ||||| || || || |||||||| || || |||||||| | | |||||| | || Sbjct 380921 GCCGTTCTACCCACGGTCGCCTTACGGCGTCGCGAAGTTGTATGGCTTTTGGATTACGGT 380980 Query 68523 AAAAATTACCGTGAGTCGTATAACATGTATGTATGCAACTCGATTTGTTTCAATCACGAG 68582 || ||||| || |||| ||||||| |||||| |||| ||||| |||||| Sbjct 380981 --GAACTACCGAGAAGCGTACGGGATGTATGCGTGCAACGGTATTTTGTTCAACCACGAG 381038 Query 68583 AGTCCCAACAGAGGCCATCAGTTCGTGACTCGTAAAATCACGAAGGTGGTCGCGAATATT 68642 || || | ||||| | |||||||| | |||||| ||| || || || | || Sbjct 381039 AGCCCAAGGAGAGGACGGACATTCGTGACGAGAAAAATCTCGAGGGCGGCGGCAGACATC 381098 Query 68643 TTCAATGGTGTCGAAAAA----TGCATGTATCTCGGTAATATAGATGC 68686 | | ||| |||| | ||| ||||||| |||||| | ||||| Sbjct 381099 TCCCTTGG----GAAACAATCCTGCCTGTATCTGGGTAATTTGGATGC 381142 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1102874912966000