Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Taiwanofungus_20camphoratus_20[genbank_20GCA_5F000766995.1_202014- 10-15] 360 sequences; 32,155,604 total letters Query= NC_010276.1 Length=156179 Score E Sequences producing significant alignments: (Bits) Value seq328 113 5e-20 seq223 98.7 1e-15 >seq328 Length=1291088 Score = 113 bits (124), Expect = 5e-20 Identities = 164/229 (72%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 64216 ACCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGC 64275 ||| ||||| | | ||||| ||||| | || || || |||||||||||||| | Sbjct 623169 ACCACCGCGAAGACGGAGCACGAGATGGAGGGTGCTCTCCTTCTGAATGTTGTAATCAGA 623110 Query 64276 GACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGG 64335 | ||||| ||||||| |||||||||||||| | || || ||||||||||| ||||| Sbjct 623109 AAGAGTGCGGCCGTCTTCCAGCTGCTTGCCGGCGAAGATCAGACGCTGCTGGTCAGGAGG 623050 Query 64336 AATTCCTTCTTTTTCTTGTATTTTTTGCTTT-ACAACCTCCACTGTATCACCGGCGTCCA 64394 || || || || ||||| | | || ||||| ||| || | || ||| | |||| Sbjct 623049 GATACCCTCCTTGTCTTG-AATCTTCGCTTTGACATTGTCGATGGTGTCAGACGATTCCA 622991 Query 64395 CTTCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443 | || | || | ||||| || ||||| || || |||||||| ||||| Sbjct 622990 CCTCAAGGGTGATAGTCTTCCCCGTCAACGTCTTCACGAAAATCTGCAT 622942 Score = 87.8 bits (96), Expect = 2e-12 Identities = 134/191 (70%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 64253 TCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAA 64312 || || || |||||||| || | || || || | || || ||||||||||| || | Sbjct 622851 TCCTTCTGGATGTTGTAGTCCGAGAGTGTACGACCATCCTCCAGCTGCTTGCCAGCGAAG 622792 Query 64313 ATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATTTTTTGCTTTACAACC 64372 || || ||||||||||| |||||||| || || || ||||| || || ||| || Sbjct 622791 ATCAGGCGCTGCTGGTCAGGAGGAATACCCTCCTTGTCTTGAATCTTCGCCTTAACGTTG 622732 Query 64373 TCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACG 64432 || | |||||| | || || || | ||| | |||||||| || | ||| || ||| Sbjct 622731 TCGATGGTATCAGATGATTCGACCTCGAGAGTGATCGTCTTGCCCGTAAGAGTCTTGACG 622672 Query 64433 AAAATTTGCAT 64443 || || ||||| Sbjct 622671 AAGATCTGCAT 622661 Score = 84.2 bits (92), Expect = 2e-11 Identities = 133/191 (70%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 64253 TCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAA 64312 || || ||||| ||||| || | || || || |||| || |||||||||||||| | Sbjct 622572 TCCTTCTGAATATTGTAGTCAGAGAGAGTACGGCCGTCCTCCAGCTGCTTGCCGGCGAAG 622513 Query 64313 ATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATTTTTTGCTTTACAACC 64372 || | || || || || || || || ||||| || || ||||| || ||| ||| Sbjct 622512 ATCAAACGTTGTTGATCAGGCGGGATGCCTTCCTTGTCCTGTATCTTGGCCTTGACATTG 622453 Query 64373 TCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACG 64432 || | |||||| | ||||| || | || | ||||| || ||||| || || ||| Sbjct 622452 TCGATGGTATCAGAAGACTCCACCTCAAGGGTGATAGTCTTTCCAGTCAATGTCTTGACG 622393 Query 64433 AAAATTTGCAT 64443 ||||| ||||| Sbjct 622392 AAAATCTGCAT 622382 >seq223 Length=1670925 Score = 98.7 bits (108), Expect = 1e-15 Identities = 159/229 (69%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 64216 ACCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGC 64275 ||| ||||| | | ||| || ||||| | || ||||| || |||||||||||||| | Sbjct 1065106 ACCACCGCGGAGACGAAGGACCAGATGTAAAGTGGATTCCTTCTGAATGTTGTAATCGGA 1065165 Query 64276 GACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGG 64335 | ||||| | || || |||||||| || || ||||||| ||||| ||||| || || Sbjct 1065166 CAACGTGCGACCATCCTCGAGCTGCTTTCCAGCGAAAATGAGACGCTGTTGGTCAGGGGG 1065225 Query 64336 AATTCCTTCTTTTTCTTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCAC 64395 ||| || || || || || || || ||| || || | ||| ||| | || || Sbjct 1065226 AATACCCTCCTTGTCCTGAATCTTGGCCTTGACGTTATCGATTGTGTCAGACGACTCGAC 1065285 Query 64396 TTCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACGAAAATTTGCATT 64444 || | || | ||||||||| || | || || || || || |||||| Sbjct 1065286 CTCGAGCGTGATGGTCTTGCCCGTGAGGGTCTTCACAAATATCTGCATT 1065334 Score = 95.1 bits (104), Expect = 1e-14 Identities = 157/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 64217 CCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCG 64276 || ||||| | | ||| || || |||| ||||| || || ||||| |||||||| | | Sbjct 1064370 CCTCCGCGAAGACGAAGAACGAGGTGAAGAGTCGACTCCTTCTGAATATTGTAATCCGAG 1064429 Query 64277 ACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGA 64336 | || | |||| || ||||||||||| || | || | ||||| ||||| || ||| Sbjct 1064430 AGCGTTCTACCGTCCTCGAGCTGCTTGCCAGCGAAGATCAAGCGCTGTTGGTCTGGCGGA 1064489 Query 64337 ATTCCTTCTTTTTCTTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACT 64396 || ||||| || || || || ||| ||| || || | || || | || || Sbjct 1064490 ATGCCTTCCTTATCCTGAATCTTTGCCTTCACGTTATCGATCGTGTCTGATGACTCGACC 1064549 Query 64397 TCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443 || | || | |||||||||||| | || || || ||||||||||| Sbjct 1064550 TCCAACGTGATGGTCTTGCCGGTAAGCGTCTTCACAAAAATTTGCAT 1064596 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 499642551598400