Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Taiwanofungus_20camphoratus_20[genbank_20GCA_5F000766995.1_202014- 10-15] 360 sequences; 32,155,604 total letters Query= NC_011345.1 Length=155122 Score E Sequences producing significant alignments: (Bits) Value seq1 105 7e-18 seq223 102 8e-17 seq328 96.9 3e-15 seq306 82.4 8e-11 >seq1 Length=2218769 Score = 105 bits (116), Expect = 7e-18 Identities = 317/479 (66%), Gaps = 18/479 (4%) Strand=Plus/Minus Query 52083 TTAAACGATGACGAGCGCTATTTTATCAAGCACGTGTTGGCGTTCTTCGCCGCCGCCGAT 52142 || || ||||||||||| || |||||| || || | || |||||||| | | ||||| Sbjct 2182515 TTGAATGATGACGAGCGGTACTTTATCTCTCATGTTCTTGCCTTCTTCGCTGGCTCCGAT 2182456 Query 52143 AGCATCGTGAACATTAACCTCATCGAGTACATG-CAGCGGAACGTTCCGGAACTCG---A 52198 |||| |||||| || ||| | ||| | | || ||| || | || ||| | Sbjct 2182455 GGCATTGTGAACGAGAATCTCGTGGAGCGCTTTTCAAACGAA-GTGC---AAGTCGCTGA 2182400 Query 52199 GGCGCAATACTTTTATAATTTGCAAGTGCTCATCGAGTGCGTGCACACGGAGATGTACAA 52258 ||||| | |||||| || || | | || ||| | | || | |||| ||| Sbjct 2182399 GGCGCGCTGCTTTTACGGCTTCCAGATTATGATGGAGAACATTCATTCCGAGACATACTC 2182340 Query 52259 TCTGCTCATTGAGCAGCTG-ATAAAAGATGAGCACGAGCGCGACACGCTGCTGAATGCGT 52317 |||||||||||| || | || || || | || | || ||| || | ||||| Sbjct 2182339 TCTGCTCATTGA-CACATACATCAAGGACCAACAACAACGGGACCATTTGTTCGATGCGA 2182281 Query 52318 TCGAGCACGTGCCGTGCGTTCGCAAAAAGGCTCAGTGGGCAATGAAGTGGATCGAGAGCG 52377 ||||| | | || || || ||||||||| | |||||| || ||||| | Sbjct 2182280 TCGAGACCATCCCATGTATTAAAAAAAAGGCTGACTGGGCACTGCGATGGATTTCT---G 2182224 Query 52378 ACACCG---CCACGCTGGCCGAGCGCATGGTGGCCTTCGCCATAGTCGAGGGCGTGtttt 52434 ||| | ||||| | || ||||| | || || ||||| ||||| ||| | || | Sbjct 2182223 ACAAGGAATCCACGTTCGCGGAGCGGCTTGTCGCTTTCGCGGCTGTCGAAGGCATATTCT 2182164 Query 52435 tttCCGGCAGCTTTGCCGCCATCTTTTACATTAAAACGAAAGGCATAATGCCCGGCCTGA 52494 | |||||| |||||| |||| || | | || | | || | ||||| ||||||| Sbjct 2182163 TCTCCGGCTCCTTTGCATCCATATTCTGGCTCAAGAAAAGGGGTCTCATGCCTGGCCTGA 2182104 Query 52495 CGTTCAGCAACGAGTTGAT-ATCGCGCGACGAAGGACTGCACACGGACTTTGCGTGCCT 52552 ||||| ||| ||| |||| ||| |||||||| ||| |||| || || ||||||||||| Sbjct 2182103 CGTTCTCCAATGAGCTGATTATC-CGCGACGAGGGAATGCATACTGATTTTGCGTGCCT 2182046 Score = 89.7 bits (98), Expect = 5e-13 Identities = 115/159 (72%), Gaps = 0/159 (0%) Strand=Plus/Plus Query 52671 GGCATGAACGCGCAGTCCATGTGCGAGTACATCGAGTTTGTGGCGGATCGTCTGTTGGTG 52730 ||||||||||| || ||||||| |||| || ||||| || || || | || | || Sbjct 2184463 GGCATGAACGCTAAGCTCATGTGCCAGTATATTGAGTTCGTCGCAGACAGGTTGATTGTC 2184522 Query 52731 CAGCTCGGGCAGCCAAAGTACTTCAACGCTCGCAATCCGTTTGAGTTTATGAACAACATT 52790 ||||| | |||||| | | |||| ||||| || || |||||| ||| || Sbjct 2184523 ACCCTCGGCGACCCAAAGGTGTACCACGCAACGAATCCTTTCGACTTTATGGACATGATC 2184582 Query 52791 TCGCTTGAGGGCAAGACCAACTTTTTCGAGAAGCGAGTC 52829 |||||| |||| ||||| ||||| ||||||||||| ||| Sbjct 2184583 TCGCTTCAGGGGAAGACAAACTTCTTCGAGAAGCGTGTC 2184621 >seq223 Length=1670925 Score = 102 bits (112), Expect = 8e-17 Identities = 141/195 (72%), Gaps = 2/195 (1%) Strand=Plus/Plus Query 138421 GACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAA 138480 || ||||| ||||| ||||| || || || || ||||| ||||| || || | | Sbjct 1064912 GATTCCTTCTGAATATTGTAATCAGACAGCGTCCGGCCATCCTCAAGTTGCTTTCCAGCA 1064971 Query 138481 TAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTAAT 138540 |||| ||||| || || || ||||| ||||| || ||||| ||| | |||| ||| | Sbjct 1064972 AAGATCAGACGTTGCTGATCTGGAGGGATACCCTCCTTGTCC-TGAATCTTTGCTTTCAC 1065030 Query 138541 TGT-TCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTT 138599 | || | ||||| | |||||| ||||| | || | ||| || ||||| ||||| || Sbjct 1065031 GTTATCGATAGTGTCCGACGACTCAACCTCAAGTGTAATCGTCTTGCCAGTGAGAGTCTT 1065090 Query 138600 TACAAAAATCTGCAT 138614 |||||||||||||| Sbjct 1065091 CACAAAAATCTGCAT 1065105 Score = 93.3 bits (102), Expect = 4e-14 Identities = 159/228 (70%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447 || || || | ||| | || | ||||| | || ||||| ||||||||||| ||| | Sbjct 1065107 CCACCGCGGAGACGAAGGACCAGATGTAAAGTGGATTCCTTCTGAATGTTGTAATCGGAC 1065166 Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507 | || || |||||||| || || || | | || |||||||||||||| || || Sbjct 1065167 AACGTGCGACCATCCTCGAGCTGCTTTCCAGCGAAAATGAGACGCTGTTGGTCAGGGGGA 1065226 Query 138508 ATACCTTCTTTGTCGGTGATTTTTTG-TTTTAATTGTTCCACGGTGTCGGTCGACTCCAC 138566 ||||| || ||||| ||| | || | || | | || | ||||| | |||||| || Sbjct 1065227 ATACCCTCCTTGTC-CTGAATCTTGGCCTTGACGTTATCGATTGTGTCAGACGACTCGAC 1065285 Query 138567 CTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614 ||||| ||| | || || || || || || || ||||| |||||||| Sbjct 1065286 CTCGAGCGTGATGGTCTTGCCCGTGAGGGTCTTCACAAATATCTGCAT 1065333 >seq328 Length=1291088 Score = 96.9 bits (106), Expect = 3e-15 Identities = 140/194 (72%), Gaps = 4/194 (2%) Strand=Plus/Minus Query 138423 CTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATA 138482 |||||| ||||||||||| || | ||| || ||| || || || || |||| | Sbjct 623133 CTCCTTCTGAATGTTGTAATCAGAAAGAGTGCGGCCGTCTTCCAGCTGCTTGCCGGCGAA 623074 Query 138483 GATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTAA--T 138540 ||| |||||||| ||||| ||||| ||||| || ||||| ||| | || | ||| | | Sbjct 623073 GATCAGACGCTGCTGGTCAGGAGGGATACCCTCCTTGTCT-TGAATCTTCGCTTTGACAT 623015 Query 138541 TGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTT 138600 ||| | | |||||| | ||| |||||||| | || | || || || |||| || || Sbjct 623014 TGT-CGATGGTGTCAGACGATTCCACCTCAAGGGTGATAGTCTTCCCCGTCAACGTCTTC 622956 Query 138601 ACAAAAATCTGCAT 138614 || ||||||||||| Sbjct 622955 ACGAAAATCTGCAT 622942 Score = 89.7 bits (98), Expect = 5e-13 Identities = 135/192 (70%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 138423 CTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATA 138482 |||||| ||||| ||||||||| | ||| || |||||| | ||||| || | | Sbjct 622295 CTCCTTCTGAATATTGTAGTCGGAAAGAGTGCGGCCGTCCTCCAACTGTTTGCCAGCGAA 622236 Query 138483 GATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTAATTG 138542 ||| |||||||| || || ||||| || || || ||||| ||| || || | | Sbjct 622235 GATAAGACGCTGCTGATCGGGAGGAATGCCCTCCTTGTCTTGGATCTTCGCCTTCACGTT 622176 Query 138543 TTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTAC 138602 || | |||||| | ||||||||||||| ||| | || || || || || || || || Sbjct 622175 ATCGATGGTGTCAGAAGACTCCACCTCGAGCGTGATAGTCTTGCCCGTAAGGGTCTTGAC 622116 Query 138603 AAAAATCTGCAT 138614 || |||||||| Sbjct 622115 GAAGATCTGCAT 622104 Score = 87.8 bits (96), Expect = 2e-12 Identities = 139/197 (71%), Gaps = 2/197 (1%) Strand=Plus/Minus Query 138423 CTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATA 138482 |||||| ||||| |||||||| | |||||| |||||| || || || |||| | Sbjct 622573 CTCCTTCTGAATATTGTAGTCAGAGAGAGTACGGCCGTCCTCCAGCTGCTTGCCGGCGAA 622514 Query 138483 GATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTA-ATT 138541 ||| | ||| ||||| || || || || ||||| ||||| || || || | ||| Sbjct 622513 GATCAAACGTTGTTGATCAGGCGGGATGCCTTCCTTGTCCTGTATCTTGGCCTTGACATT 622454 Query 138542 GTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTA 138601 || | | ||| || | ||||||||||| | || | || || ||||||| || || | Sbjct 622453 GT-CGATGGTATCAGAAGACTCCACCTCAAGGGTGATAGTCTTTCCAGTCAATGTCTTGA 622395 Query 138602 CAAAAATCTGCATGGCT 138618 | |||||||||||| || Sbjct 622394 CGAAAATCTGCATGCCT 622378 Score = 84.2 bits (92), Expect = 2e-11 Identities = 137/194 (71%), Gaps = 4/194 (2%) Strand=Plus/Minus Query 138423 CTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATA 138482 |||||| || ||||||||||| | ||||| ||||| || || || || | | Sbjct 622852 CTCCTTCTGGATGTTGTAGTCCGAGAGTGTACGACCATCCTCCAGCTGCTTGCCAGCGAA 622793 Query 138483 GATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTAA--T 138540 ||| || ||||| ||||| ||||| ||||| || ||||| ||| | || | |||| | Sbjct 622792 GATCAGGCGCTGCTGGTCAGGAGGAATACCCTCCTTGTC-TTGAATCTTCGCCTTAACGT 622734 Query 138541 TGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTT 138600 || || | ||| || | || || ||||||| || | ||| || || || ||||| || Sbjct 622733 TG-TCGATGGTATCAGATGATTCGACCTCGAGAGTGATCGTCTTGCCCGTAAGAGTCTTG 622675 Query 138601 ACAAAAATCTGCAT 138614 || || |||||||| Sbjct 622674 ACGAAGATCTGCAT 622661 >seq306 Length=1616116 Score = 82.4 bits (90), Expect = 8e-11 Identities = 115/159 (72%), Gaps = 2/159 (1%) Strand=Plus/Minus Query 52671 GGCATGAACGCGCAGTCCATGTGCGAGTACATCGAGTTTGTGGCGGATCG-TCTGTTGGT 52729 |||||||||||| | ||||||| ||||||| |||||||| ||||| || | ||| Sbjct 903981 GGCATGAACGCGAAACTCATGTGCCAGTACATTGAGTTTGTCGCGGACCGATTGGTTTTC 903922 Query 52730 GCAGCTCGGGCAGCCAAAGTACTTCAACGCTCGCAATCCGTTTGAGTTTATGAACAACAT 52789 ||| ||||| | || ||| || ||| | || || ||||| || ||| ||| || Sbjct 903921 GCA-CTCGGTGATCCGAAGATCTACAATTCCACGAACCCCTTTGACTTCATGGACATGAT 903863 Query 52790 TTCGCTTGAGGGCAAGACCAACTTTTTCGAGAAGCGAGT 52828 || | | || ||||||||||| ||||||||||| || Sbjct 903862 CTCATTGCAAGGGAAGACCAACTTCTTCGAGAAGCGTGT 903824 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 496260166819200