Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Taiwanofungus_20camphoratus_20[genbank_20GCA_5F000766995.1_202014- 10-15] 360 sequences; 32,155,604 total letters Query= NC_011616.1 Length=148634 Score E Sequences producing significant alignments: (Bits) Value seq223 122 8e-23 seq328 113 4e-20 >seq223 Length=1670925 Score = 122 bits (134), Expect = 8e-23 Identities = 163/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 126887 CCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCC 126946 |||||||| | || | |||| ||||| || || || || ||||| ||||||||| | Sbjct 1065107 CCACCGCGGAGACGAAGGACCAGATGTAAAGTGGATTCCTTCTGAATGTTGTAATCGGAC 1065166 Query 126947 ATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGT 127006 | ||||||| ||| || ||||| ||||||||| | || | ||||| || || || || Sbjct 1065167 AACGTGCGACCATCCTCGAGCTGCTTTCCAGCGAAAATGAGACGCTGTTGGTCAGGGGGA 1065226 Query 127007 ATGCCCTCCTTGTCCGTGATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGACT 127066 || |||||||||||| || || ||||| | |||| ||||| | |||||| Sbjct 1065227 ATACCCTCCTTGTCCTGAATCTTGGCCTTGACGTTATCGATTGTGTCAGACGACTCGACC 1065286 Query 127067 TCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113 |||| || | || ||||| || || || || ||||| |||||||| Sbjct 1065287 TCGAGCGTGATGGTCTTGCCCGTGAGGGTCTTCACAAATATCTGCAT 1065333 Score = 120 bits (132), Expect = 3e-22 Identities = 147/198 (74%), Gaps = 2/198 (1%) Strand=Plus/Plus Query 126917 GTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCCA 126976 ||||| || || |||||||||||||| || ||| || ||| || || || |||||| Sbjct 1064909 GTAGATTCCTTCTGAATATTGTAATCAGACAGCGTCCGGCCATCCTCAAGTTGCTTTCCA 1064968 Query 126977 GCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGC-TT 127035 || |||||| || |||||||| ||||| || |||||||||||| ||| | | ||| || Sbjct 1064969 GCAAAGATCAGACGTTGCTGATCTGGAGGGATACCCTCCTTGTCC-TGAATCTTTGCTTT 1065027 Query 127036 GAGTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGTCAGAGT 127095 | | |||| ||||||| ||| || || | || | ||| ||||| || ||||| Sbjct 1065028 CACGTTATCGATAGTGTCCGACGACTCAACCTCAAGTGTAATCGTCTTGCCAGTGAGAGT 1065087 Query 127096 TTTTACAAAAATCTGCAT 127113 || |||||||||||||| Sbjct 1065088 CTTCACAAAAATCTGCAT 1065105 Score = 105 bits (116), Expect = 6e-18 Identities = 97/123 (79%), Gaps = 0/123 (0%) Strand=Plus/Plus Query 126886 TCCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCC 126945 |||||| |||| || | ||| ||||| | |||||||||||| || || ||||||||| Sbjct 1065334 TCCACCACGTAGGCGGAGCACTAAATGCAGCGTAGACTCTTTCTGGATGTTGTAATCGGA 1065393 Query 126946 CATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGG 127005 | ||||||| ||| || |||||||| || ||| ||||||| ||||||||||| || || Sbjct 1065394 TAACGTGCGACCATCCTCCAGCTGTTTGCCTGCGAAGATCAAGCGCTGCTGATCAGGGGG 1065453 Query 127006 TAT 127008 || Sbjct 1065454 GAT 1065456 Score = 98.7 bits (108), Expect = 9e-16 Identities = 142/198 (72%), Gaps = 2/198 (1%) Strand=Plus/Plus Query 126917 GTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCCA 126976 || ||||| || |||||||||||||| | ||| | | || || ||||| || ||| Sbjct 1064400 GTCGACTCCTTCTGAATATTGTAATCCGAGAGCGTTCTACCGTCCTCGAGCTGCTTGCCA 1064459 Query 126977 GCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTG-CTT 127035 ||| ||||||| ||||| || || || || ||||| ||||| ||| ||| | | || ||| Sbjct 1064460 GCGAAGATCAAGCGCTGTTGGTCTGGCGGAATGCCTTCCTTATCC-TGAATCTTTGCCTT 1064518 Query 127036 GAGTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGTCAGAGT 127095 | | |||| ||||| | |||||| || | || | || |||||||| || || Sbjct 1064519 CACGTTATCGATCGTGTCTGATGACTCGACCTCCAACGTGATGGTCTTGCCGGTAAGCGT 1064578 Query 127096 TTTTACAAAAATCTGCAT 127113 || |||||||| ||||| Sbjct 1064579 CTTCACAAAAATTTGCAT 1064596 >seq328 Length=1291088 Score = 113 bits (124), Expect = 4e-20 Identities = 140/192 (73%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 126922 CTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTA 126981 ||| || ||||||||||| ||| | ||||| || || | |||||| |||||| | Sbjct 622295 CTCCTTCTGAATATTGTAGTCGGAAAGAGTGCGGCCGTCCTCCAACTGTTTGCCAGCGAA 622236 Query 126982 GATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGCTTGAGTTG 127041 ||| | ||||||||||||||||| |||||||||||||| ||| ||| ||| | | Sbjct 622235 GATAAGACGCTGCTGATCGGGAGGAATGCCCTCCTTGTCTTGGATCTTCGCCTTCACGTT 622176 Query 127042 TTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTAC 127101 |||| |||||| | | ||| || |||| || | || ||||| || || || || || Sbjct 622175 ATCGATGGTGTCAGAAGACTCCACCTCGAGCGTGATAGTCTTGCCCGTAAGGGTCTTGAC 622116 Query 127102 AAAAATCTGCAT 127113 || |||||||| Sbjct 622115 GAAGATCTGCAT 622104 Score = 93.3 bits (102), Expect = 4e-14 Identities = 138/193 (72%), Gaps = 2/193 (1%) Strand=Plus/Minus Query 126922 CTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTA 126981 ||| || || || ||||| || | || ||| ||| || ||||| || |||||| | Sbjct 622852 CTCCTTCTGGATGTTGTAGTCCGAGAGTGTACGACCATCCTCCAGCTGCTTGCCAGCGAA 622793 Query 126982 GATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGCTTGA-GTT 127040 ||||| |||||||| || ||||| || ||||||||||| || ||| ||| | ||| Sbjct 622792 GATCAGGCGCTGCTGGTCAGGAGGAATACCCTCCTTGTCTTGAATCTTCGCCTTAACGTT 622733 Query 127041 GTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTA 127100 | |||| ||| || | ||||| |||| || | ||| ||||| || ||||| || | Sbjct 622732 G-TCGATGGTATCAGATGATTCGACCTCGAGAGTGATCGTCTTGCCCGTAAGAGTCTTGA 622674 Query 127101 CAAAAATCTGCAT 127113 | || |||||||| Sbjct 622673 CGAAGATCTGCAT 622661 Score = 86.0 bits (94), Expect = 6e-12 Identities = 155/227 (68%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 126887 CCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCC 126946 |||||||| | || | ||| | ||| | || ||| || ||||| |||||||| Sbjct 623168 CCACCGCGAAGACGGAGCACGAGATGGAGGGTGCTCTCCTTCTGAATGTTGTAATCAGAA 623109 Query 126947 ATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGT 127006 | ||||| || || ||||| || || ||| |||||| |||||||| || ||||| Sbjct 623108 AGAGTGCGGCCGTCTTCCAGCTGCTTGCCGGCGAAGATCAGACGCTGCTGGTCAGGAGGG 623049 Query 127007 ATGCCCTCCTTGTCCGTGATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGACT 127066 || ||||||||||| || ||| |||| | |||| |||||| | || || Sbjct 623048 ATACCCTCCTTGTCTTGAATCTTCGCTTTGACATTGTCGATGGTGTCAGACGATTCCACC 622989 Query 127067 TCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113 || | ||| | || || || |||| || || || ||||||||||| Sbjct 622988 TCAAGGGTGATAGTCTTCCCCGTCAACGTCTTCACGAAAATCTGCAT 622942 Score = 84.2 bits (92), Expect = 2e-11 Identities = 136/196 (69%), Gaps = 0/196 (0%) Strand=Plus/Minus Query 126922 CTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTA 126981 ||| || ||||||||||| || | || || || || ||||| || || ||| | Sbjct 622573 CTCCTTCTGAATATTGTAGTCAGAGAGAGTACGGCCGTCCTCCAGCTGCTTGCCGGCGAA 622514 Query 126982 GATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGCTTGAGTTG 127041 |||||| || || ||||| || || ||||| ||||||||| || || ||||| | Sbjct 622513 GATCAAACGTTGTTGATCAGGCGGGATGCCTTCCTTGTCCTGTATCTTGGCCTTGACATT 622454 Query 127042 TTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTAC 127101 |||| ||| || | | ||| || || | ||| | || || || |||| || || || Sbjct 622453 GTCGATGGTATCAGAAGACTCCACCTCAAGGGTGATAGTCTTTCCAGTCAATGTCTTGAC 622394 Query 127102 AAAAATCTGCATGGCT 127117 |||||||||||| || Sbjct 622393 GAAAATCTGCATGCCT 622378 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 475498660246400