Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Taiwanofungus_20camphoratus_20[genbank_20GCA_5F000766995.1_202014- 10-15] 360 sequences; 32,155,604 total letters Query= NC_014767.1 Length=184095 Score E Sequences producing significant alignments: (Bits) Value seq223 113 5e-20 seq1 87.8 2e-12 >seq223 Length=1670925 Score = 113 bits (124), Expect = 5e-20 Identities = 271/404 (67%), Gaps = 17/404 (4%) Strand=Plus/Minus Query 11588 TGTCGAAACCGTCCATTTCTGTGAGAAGCTGGTTGATCGTCTGTTCACGCTCATCGTTG- 11646 || ||||||||||||| || || || ||||||| || | || ||||||||||| Sbjct 338891 TGCCGAAACCGTCCATCTCCACTAGCAGTTGGTTGAGAGTATTCTCCCGCTCATCGTTAC 338832 Query 11647 ----GAGGGCATACCACCTGCCGAACGCTTCTTACCGACAGCGTCAATCTCATCGATGAA 11702 || | | || | |||| ||| ||| || | ||| ||||| || |||||||| Sbjct 338831 CGCCGAAGCCGCCCCGCTTGCC--ACGTGCCTTTCCAATAGCATCAATTTCGTCGATGAA 338774 Query 11703 TACGATACACGGTTGGTTGGCACGTGCCTGTTCGAAAAGTTCACGTACACGCTTCGCTCC 11762 | ||| |||| ||| ||| | || || ||||| ||||| | ||| Sbjct 338773 GATGATGGACGGCGCGTTCTTTTTTGCAGAAGCAAACAGATCACGAACACGGGAAGATCC 338714 Query 11763 AACACCTACGAACATCTCAACGAAGTTTGCGGCA--GAACACTGA-ATGAAGGGAACATT 11819 |||||| ||||||||||| ||||| | ||| | | | ||||| | |||||| ||||| Sbjct 338713 AACACCAACGAACATCTCGACGAACT---CGGAACCGGAGACTGAGAGGAAGGGCACATT 338657 Query 11820 AGACTCACCAGCGATGGCTCGAGCGAGGAGAGTCTTACCCGTACCAGGTGCACCAGCGAG 11879 | ||| || || | || || || || ||||||||||| ||||||| ||||| || Sbjct 338656 GGCCTCGCCTGCAGTTGCCTTCGCAAGCAGGGTCTTACCCGTTCCAGGTGGACCAGAAAG 338597 Query 11880 AAGGGCGCCACGGGGGATCTTGGCACC--ACTTCCAAAGTAGCGCTCAGGCTTCTTGAGG 11937 || || || || || ||||| || || |||| | || || | |||| ||||||| Sbjct 338596 AATAGCACCGCGAGGAATCTTCGCGCCTAGCTTCTCA--TATCGAGCTGGCTCCTTGAGG 338539 Query 11938 AAGTCCACAATCTCCTCAAGTTCCTCCTTGGCGGAGTCGATACC 11981 ||| || | |||| | |||| ||| || ||| ||||| Sbjct 338538 AAGGAAACGAACTCCATGATCTCCTGCTTCGCCTCGTCCATACC 338495 >seq1 Length=2218769 Score = 87.8 bits (96), Expect = 2e-12 Identities = 262/398 (66%), Gaps = 6/398 (2%) Strand=Plus/Plus Query 119529 ATGAGCTCATTACTGAAGCAAAGTCCAGGCATGAGTCCTCTTTTCTTTAGCCAAAAGATG 119588 || |||||||| ||| || ||||||||||| || |||||||| ||||| || ||| Sbjct 2182085 ATCAGCTCATTGGAGAACGTCAGGCCAGGCATGAGACCCCTTTTCTTGAGCCAGAATATG 2182144 Query 119589 GCACAAAAACTTCCAGAAAAGAAGATGCCCTCCACACAGGCGAAAGCGAATAGACGCTCA 119648 | ||| || || ||||| ||||| || ||| |||||||||| || ||||| Sbjct 2182145 GATGCAAAGGAGCCGGAGAAGAATATGCCTTCGACAGCCGCGAAAGCGACAAGCCGCTCC 2182204 Query 119649 GCAAAAGGTCGA-GACTTGTC-GAA--CCACTTGAGAGCCCAGTTGGCCTTACGCTCTAT 119704 || || || || |||||| ||| ||| || ||||||| ||||| | || Sbjct 2182205 GC-GAACGTGGATTCCTTGTCAGAAATCCATCGCAGTGCCCAGTCAGCCTTTTTTTTAAT 2182263 Query 119705 GCAGGGGACAGTTTGGATGGCTTCGAAAAGTTGCTTCTTTTCAGCACCATCCTTAATATA 119764 || |||| || | ||| || ||||| | || | | || ||||| || || Sbjct 2182264 ACATGGGATGGTCTCGATCGCATCGAACAAATGGTCCCGTTGTTGTTGGTCCTTGATGTA 2182323 Query 119765 TTTATCAATGAGTTTAGAGTAGGTCTCACCATGAACCATTTCATTGTGTGACTGATAGGC 119824 | | |||||||| |||||| ||||| ||||| | || | ||| || | Sbjct 2182324 TGTGTCAATGAGCAGAGAGTATGTCTCGGAATGAATGTTCTCCATCATAATCTGGAAGCC 2182383 Query 119825 ATAAAATGAGCGAGCTTCGGAAATTTGCACTTCGTCAGCAAAATTGTTGTTGATATTTTC 119884 ||||| |||| || || | | ||||||||||| | ||| | || ||| || Sbjct 2182384 GTAAAAGCAGCGCGCCTCAGCGACTTGCACTTCGTTTGAAAAGCGCTCCACGAGATTCTC 2182443 Query 119885 AAAAACAATTCCATCGGATCCAGCGAAGAATGCTAAGA 119922 ||||| |||||||| ||||||||||| || |||| Sbjct 2182444 GTTCACAATGCCATCGGAGCCAGCGAAGAAGGC-AAGA 2182480 Score = 87.8 bits (96), Expect = 2e-12 Identities = 183/271 (68%), Gaps = 9/271 (3%) Strand=Plus/Minus Query 119528 GATGAGCTCATTACTGAAGCAAAGTCCAGGCATGAGTCCTCTTTTCTTTAGCCAAAAGAT 119587 ||| |||||||| ||| || |||||||| | ||||| ||||| ||||| || || Sbjct 2184262 GATAAGCTCATTTGAGAACGTGAGACCAGGCATCAAGCCTCTCTTCTTCAGCCAGAAAAT 2184203 Query 119588 GGCACAAAAACTTCCAGAAAAGAAGATGCCCTCCACACAGGCGAAAGCGAATAGACGCTC 119647 | |||| ||| ||||||||||| ||||| ||| ||||| || | || ||||| Sbjct 2184202 CGAGGCAAAAGATCCTGAAAAGAAGATACCCTCAACAGCAGCGAAGGCAACGAGCCGCTC 2184143 Query 119648 AGCAAAAGGTCGAGA---CTTGTC---GAACCACTTGAGAGCCCAGTTGGCCTTACGCTC 119701 ||| || | ||| || ||| || |||| || ||||||| ||||| || Sbjct 2184142 AGCGAACG---CAGATTTCTGGTCCGAGATCCACCGCAGCGCCCAGTCAGCCTTCTTCTT 2184086 Query 119702 TATGCAGGGGACAGTTTGGATGGCTTCGAAAAGTTGCTTCTTTTCAGCACCATCCTTAAT 119761 ||||| || | ||| | || || |||||||| |||| | | ||| ||||| || Sbjct 2184085 GATGCATGGAATAGTGTCAATAGCATCGAAAAGGTGCTCCCGCTGCGCAGGGTCCTTGAT 2184026 Query 119762 ATATTTATCAATGAGTTTAGAGTAGGTCTCA 119792 || | || || || |||||| |||||| Sbjct 2184025 GTAAGTGTCGATAAGAAGAGAGTATGTCTCA 2183995 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 588973349608000