Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Taiwanofungus_20camphoratus_20[genbank_20GCA_5F000766995.1_202014- 10-15] 360 sequences; 32,155,604 total letters Query= NC_015960.1 Length=175699 Score E Sequences producing significant alignments: (Bits) Value seq306 161 1e-34 seq1 129 7e-25 >seq306 Length=1616116 Score = 161 bits (178), Expect = 1e-34 Identities = 374/562 (67%), Gaps = 5/562 (1%) Strand=Plus/Plus Query 18957 CAAACATGCAAAATCACAATGTAGTCCCTCGTCTCTACTTATCAATTCATTAGAAAATGT 19016 |||||| ||||| || || | ||||| || | |||||||| ||||| || || || Sbjct 904147 CAAACACGCAAAGTCGGTGTGCATGCCCTCATCACGACTTATCAGCTCATTCGAGAACGT 904206 Query 19017 TAAACCAGGCATCAGTCCTCttttttttAACCAGAATATAGAAGCAAATGATCCAGAAAA 19076 | |||||||||||| || | || || | |||||| || || ||||| || ||||| || Sbjct 904207 CAGACCAGGCATCAGGCCACGCTTCTTGAGCCAGAAAATGGACGCAAAGGACCCAGAGAA 904266 Query 19077 GAATATACCTTCTACTGCTGCAAAAGCAACTAGTCTTTCTCCATAACTAGCATCATTATT 19136 ||| || || |||||||| ||||| ||||| |||| || || | ||| | |||| Sbjct 904267 GAAAATGCCCTCTACTGCAGCAAAGGCAACGAGTCGCTCAGCAAATGTAGACTTCTTATC 904326 Query 19137 ATGAATCCATTTCAGTGCCCAATCAGCCTTCTTTTTTACACATGGCATTGTCTCTATAGA 19196 |||||| || |||||| ||||||||||| || | ||| || || || || || | Sbjct 904327 CGAAATCCACCGCAATGCCCAGTCAGCCTTCTTCTTGATACAAGGGATGGTGTCAATGGC 904386 Query 19197 ATTAAATAGATACATACGCTCATCTGTATCTTTAACATATGCATCTATCAATAAACTGTA 19256 | ||| |||| |||| | | || || | || | ||| || | | ||| Sbjct 904387 GTCAAAGAGATGTTCTCGCTGCTGAGGGTCCTTGATGTAAGTATCGATGAGAAGGGAGTA 904446 Query 19257 CATTTCTGAATGAATATTTTCTATAGCCATCTGAAATCCGTAAAAACATCTTGCTTCTGT 19316 | || || ||||| || || || ||||| || || || || |||| ||||||| Sbjct 904447 TGTCTCGGAGTGAATGTTCTCCATCATGATCTGGAAGCCATAGAAGCATCGCGCTTCTGC 904506 Query 19317 TATCTGTACTTCACTACAAAATCTTTCGACCAAATTTTCATTAACTATTCCATCACTAGC 19376 |||||| ||| | | || | || || | ||| || || || || ||||| || Sbjct 904507 AGCCTGTACCTCATTGGAGAACCGCTCAACGAGATTCTCGTTGACAATGCCATCCGACGC 904566 Query 19377 TGCAAAAAATGCTAATACATGTTTAATAAAATGTTTTTCATCTGAGGTTAATG----TAT 19432 ||||| || || | ||||| || || ||| | || | | ||| | | | | Sbjct 904567 AGCAAAGAACGCGAGAACATGCGAAAGGAAGTGTCTCTC-GCCGTCGTTCAAGCGGTTGT 904625 Query 19433 TCCAATCATTAATATCTTTAGATAAATCTACTTCTTCAACTGTCCAAAAAGAAGCCTCTG 19492 |||| |||| | || || |||| || | || || | ||||| ||||||||||| | Sbjct 904626 TCCAGTCATGCAGGTCCTTCGATAGGTCAATCTCCTCCATCGTCCAGAAAGAAGCCTCGG 904685 Query 19493 CTTTTTTATACATGTTCCATAT 19514 | || |||||||| | ||| || Sbjct 904686 CCTTCTTATACATCTGCCAGAT 904707 >seq1 Length=2218769 Score = 129 bits (142), Expect = 7e-25 Identities = 366/556 (66%), Gaps = 11/556 (2%) Strand=Plus/Minus Query 18957 CAAACATGCAAAATCACAATGTAGTCCCTCGTCTCTACTTATCAATTCATTAGAAAATGT 19016 ||| |||||||| || ||| | |||||||| | || || | ||||| || || || Sbjct 2184301 CAAGCATGCAAAGTCGGTATGCATACCCTCGTCACGGCTGATAAGCTCATTTGAGAACGT 2184242 Query 19017 TAAACCAGGCATCAGTCCTCttttttttAACCAGAATATAGAAGCAAATGATCCAGAAAA 19076 | ||||||||||| ||||| || || | |||||| || || ||||| ||||| ||||| Sbjct 2184241 GAGACCAGGCATCAAGCCTCTCTTCTTCAGCCAGAAAATCGAGGCAAAAGATCCTGAAAA 2184182 Query 19077 GAATATACCTTCTACTGCTGCAAAAGCAACTAGTCTTTCTCCATAACTAGCATCATTAT- 19135 ||| ||||| || || || || || ||||| || | || | ||| ||| || | Sbjct 2184181 GAAGATACCCTCAACAGCAGCGAAGGCAACGAGCCGCTCAGC-GAAC--GCAGATTTCTG 2184125 Query 19136 -TATGA-ATCCATTTCAGTGCCCAATCAGCCTTCTTTTTTACACATGGCATTGTCTCTAT 19193 | || ||||| ||| ||||| ||||||||||| || | ||||| || || || || Sbjct 2184124 GTCCGAGATCCACCGCAGCGCCCAGTCAGCCTTCTTCTTGATGCATGGAATAGTGTCAAT 2184065 Query 19194 AGAATTAAATAGATACATACGCTCATCTGTATCTTTAACATATGCATCTATCAATAAACT 19253 || || || || | | |||| | | || || | || | || || | | | Sbjct 2184064 AGCATCGAAAAGGTGCTCCCGCTGCGCAGGGTCCTTGATGTAAGTGTCGATAAGAAGAGA 2184005 Query 19254 GTACATTTCTGAATGAATATTTTCTATAGCCATCTGAAATCCGTAAAAACATCTTGCTTC 19313 ||| | || || ||||| || || || || || || ||||| || || | || || Sbjct 2184004 GTATGTCTCAGAGTGAATGTTCTCCATCATGATTTGGAAACCGTAGAAGCAGCGGGCCTC 2183945 Query 19314 TGTTATCTGTACTTCACTACAAAATCTTTCGACCAAATTTTCATTAACTATTCCATCACT 19373 | | ||| |||||| | | |||| || || | || ||||| || || ||||| Sbjct 2183944 GGCAACCTGCACTTCATTCGAGAATCGCTCAACAAGGTTCTCATTGACGATGCCATCCGA 2183885 Query 19374 AGCTGCAAAAAATGCTAATACATGTTTAATAAAATGTTTTTCATCTGAGGTTAAT----G 19429 || ||||| || || | || || ||||| || ||| | | ||| || Sbjct 2183884 CGCAGCAAAGAAAGCAAGAACGTGAGATATAAAGTGACGTTC-GCCGTCGTTCATTCGGT 2183826 Query 19430 TATTCCAATCATTAATATCTTTAGATAAATCTACTTCTTCAACTGTCCAAAAAGAAGCCT 19489 | ||||| |||| | || || || | ||| || || || | |||||| || || |||| Sbjct 2183825 TGTTCCAGTCATGGAGGTCCTTCGAGAGATCAACCTCCTCCATTGTCCAGAAGGAGGCCT 2183766 Query 19490 CTGCTTTTTTATACAT 19505 | || ||||| ||||| Sbjct 2183765 CAGCCTTTTTGTACAT 2183750 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 562106270510400