Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Taiwanofungus_20camphoratus_20[genbank_20GCA_5F000766995.1_202014- 10-15] 360 sequences; 32,155,604 total letters Query= NC_016072.1 Length=1259197 Score E Sequences producing significant alignments: (Bits) Value seq339 102 7e-16 seq223 102 7e-16 seq35 100 2e-15 >seq339 Length=1233777 Score = 102 bits (112), Expect = 7e-16 Identities = 139/193 (72%), Gaps = 1/193 (1%) Strand=Plus/Plus Query 550019 TATAGTTGTGTTGGTGTTTGGCAAAATGGTAAAGTTGAAATTATTGCCAATGATCAAGGT 550078 ||||||||||||||||| |||||||| | | ||||| || || ||||| || |||||| Sbjct 26610 TATAGTTGTGTTGGTGTGTGGCAAAACGATCGTGTTGAGATCATCGCCAACGACCAAGGT 26669 Query 550079 AACAGAACTACTCCATCTTATGTTTCTTTCACGGAAACTGAACATTTAGTTGGTGATGCA 550138 ||| |||| || || || ||||| || ||| |||| | || | || | || ||||| Sbjct 26670 AACCGAACGACACCGTCGTATGTCTCCTTCTCGGACAACGAGCGGTTGATCGGCGATGCC 26729 Query 550139 GCAAAATATCAAGCCACTGGTAATCCTACCAATACTATTTTTGATGCTAAACGTTTAATT 550198 || || | |||| || || || ||| ||| |||||||||| || || | ||| Sbjct 26730 GCGAAGAACCAAGTTGCTATGAACCCCCACAACACTGTTTTTGATGCCAAGCGACTCATT 26789 Query 550199 GGAAG-AAGTTTT 550210 || | ||||||| Sbjct 26790 GGCCGCAAGTTTT 26802 Score = 86.0 bits (94), Expect = 5e-11 Identities = 154/220 (70%), Gaps = 4/220 (2%) Strand=Plus/Plus Query 550319 TCACCAGAACAAATTTCATCTATGGTTTTAATGAAAATGAAACAAACAGCC-AGTGCTTT 550377 || ||||| |||| || || |||||||| |||| ||||| | || ||| ||| | | Sbjct 26971 TCGCCAGAGGAAATATCCTCCATGGTTTTGTTGAAGATGAAGGAGACTGCCGAGT-CGTA 27029 Query 550378 TGTTGGTCAAGAAGTTACGGATGCAGTAATAACTGTACCAGCATATTTTAATGACTCACA 550437 | ||| | || | | || || | || || || || || || |||||||| || Sbjct 27030 CCTCGGTAACACGGTCAACAACGCTGTTGTCACCGTTCCCGCTTACTTCAATGACTCGCA 27089 Query 550438 ACGTCAAGCTACTAAAGATGCTGG-ACGTATTGCTGGACTTAATGTTCTTCGTATTATCA 550496 ||||||||| || || || ||||| ||| || | || || || || || ||||| || | Sbjct 27090 ACGTCAAGCAACAAAGGACGCTGGTACG-ATCTCCGGTCTCAACGTCCTCCGTATCATTA 27148 Query 550497 ATGAACCTACTGCTGCTGCACTTGCATATGGACTTGATAA 550536 |||| ||||| || ||||| |||| ||||| || || || Sbjct 27149 ATGAGCCTACCGCGGCTGCCATTGCTTATGGTCTCGACAA 27188 >seq223 Length=1670925 Score = 102 bits (112), Expect = 7e-16 Identities = 150/210 (71%), Gaps = 2/210 (1%) Strand=Plus/Plus Query 563267 CAAGATGAAGGGTACTTTCTTTGGTAATATTGTAATCAGCTAGAGTTCTTGAATCTTCAA 563326 |||| ||||||||| ||| || |||||||||||||| || || | ||| |||| Sbjct 1064898 CAAGGTGAAGGGTAGATTCCTTCTGAATATTGTAATCAGACAGCGTCCGGCCATCCTCAA 1064957 Query 563327 GTTGTTTTCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATTCCTTCTTTATCTTGAA 563386 |||| ||||| ||||| || || | ||||||||| ||||| || || || || || |||| Sbjct 1064958 GTTGCTTTCCAGCAAAGATCAGACGTTGCTGATCTGGAGGGATACCCTCCTTGTCCTGAA 1065017 Query 563387 TTTTTTGTTTTACTGCCTCAATTGTATCAGTGTGAGT-ACATTCGAGAGTAACAGTTTTA 563445 | ||| ||| || || || || || | || | | || || |||| || || Sbjct 1065018 TCTTTGCTTTCACGTTATCGATAGTGTCCG-ACGACTCAACCTCAAGTGTAATCGTCTTG 1065076 Query 563446 CCAGTAAGAGTTTTAACGAAAATTTGCATA 563475 ||||| ||||| || || ||||| |||||| Sbjct 1065077 CCAGTGAGAGTCTTCACAAAAATCTGCATA 1065106 Score = 93.3 bits (102), Expect = 3e-13 Identities = 154/220 (70%), Gaps = 2/220 (1%) Strand=Plus/Plus Query 563257 AGACGGAGTACAAGATGAAGGGTACTTTCTTTGGTAATATTGTAATCAGCTAGAGTTCTT 563316 || || ||||| ||||| |||||| || || ||| || || || | || || | Sbjct 1064607 AGCCGTAGTACGAGATGGAGGGTAGACTCCTTCTGAATGTTATAGTCGGAAAGGGTCCGC 1064666 Query 563317 GAATCTTCAAGTTGTTTTCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATTCCTTCT 563376 |||||| ||||| ||||| ||||| || || | |||||||||||||||||| ||||| Sbjct 1064667 CCATCTTCGAGTTGCTTTCCAGCAAAGATGAGGCGTTGCTGATCAGGAGGAATGCCTTCC 1064726 Query 563377 TTATCTTGAATTTTTTGTTTTACTGCCTCAATTGTATCAGTGTGAGTACA-TTCGAGAGT 563435 || || ||||| || ||| || || || ||||| | || | | ||||| || Sbjct 1064727 TTGTCCTGAATCTTAGCTTTGACGTTGTCGATCGTATC-GGACGACTCGACCTCGAGTGT 1064785 Query 563436 AACAGTTTTACCAGTAAGAGTTTTAACGAAAATTTGCATA 563475 | || || ||||| ||||| || || || || |||||| Sbjct 1064786 GATCGTCTTGCCAGTGAGAGTCTTCACAAAGATCTGCATA 1064825 >seq35 Length=937232 Score = 100 bits (110), Expect = 2e-15 Identities = 105/138 (76%), Gaps = 0/138 (0%) Strand=Plus/Plus Query 394022 AATGTTAAATTCATTGCAATAATTTGTGGTAGTCCCACTTCATTAAGAGCAATATTTGGA 394081 || ||||| ||||| || || | | |||| || ||||||| || ||| ||| ||| Sbjct 322600 AAAGTTAAGTTCATGGCTATGCTCTTCGGTACGCCGACTTCATCCAGCTCAAGATTGGGA 322659 Query 394082 TCCGAGGTAATAACTGTACGACCTGACATATCCACACGTTTTCCCATAAGATTTCCACGA 394141 || |||||| |||||||| | || | |||||||||||||||||| ||||| |||||| Sbjct 322660 TCACCGGTAATGACTGTACGTGCGGAGAAATCCACACGTTTTCCCATCAGATTGCCACGA 322719 Query 394142 ATTCTACCTTCTTTACCT 394159 | || |||||||| ||| Sbjct 322720 AGTCGGCCTTCTTTGCCT 322737 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 4029276961576400