Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Taiwanofungus_20camphoratus_20[genbank_20GCA_5F000766995.1_202014- 10-15] 360 sequences; 32,155,604 total letters Query= NC_016924.1 Length=185139 Score E Sequences producing significant alignments: (Bits) Value seq1 102 1e-16 >seq1 Length=2218769 Score = 102 bits (112), Expect = 1e-16 Identities = 289/444 (65%), Gaps = 0/444 (0%) Strand=Plus/Plus Query 37168 ACAATAAACATGCAAAATCACAATGTAAACCTTCATCTCTACTTATCAATTCATTAGAAA 37227 |||| | || ||||||||| ||| | || || || | | |||| ||||| || | Sbjct 2182041 ACAACAGGCACGCAAAATCAGTATGCATTCCCTCGTCGCGGATAATCAGCTCATTGGAGA 2182100 Query 37228 AGGTTAATCCTGGCATTAAACCTCtttttttAATCCAAAATATTGCTGCAAAAGATCCAG 37287 | || | || ||||| | ||| ||||| || | ||| ||||| | |||||| || || | Sbjct 2182101 ACGTCAGGCCAGGCATGAGACCCCTTTTCTTGAGCCAGAATATGGATGCAAAGGAGCCGG 2182160 Query 37288 AAAAGAAAATACCTTCAACTGCTGCAAATGCTACAAGACGTGTACCGAAAGTTGAACTAT 37347 | ||||| || ||||| || || || || || ||||| || |||| || || | Sbjct 2182161 AGAAGAATATGCCTTCGACAGCCGCGAAAGCGACAAGCCGCTCCGCGAACGTGGATTCCT 2182220 Query 37348 AATCAGAAATCCAtttttttGTCCAATCTGCCTTTAATTTAACACATTCAATTGTTTCAA 37407 |||||||||||| || ||| || |||||| ||||| |||| || || || | Sbjct 2182221 TGTCAGAAATCCATCGCAGTGCCCAGTCAGCCTTTTTTTTAATACATGGGATGGTCTCGA 2182280 Query 37408 TTGCTTTTAAGAGAAAGtttttttCTTCACTATCTGTTATATAAGTATCAATTAGTAAAC 37467 | || | || | | || || || || | || || || ||||| || | | Sbjct 2182281 TCGCATCGAACAAATGGTCCCGTTGTTGTTGGTCCTTGATGTATGTGTCAATGAGCAGAG 2182340 Query 37468 TATACATTTCAGAGTGAATATTTTCAATAGCTATCTGAAAACCATAAAAACACCTAGCTT 37527 || | || || ||||| || || || ||||| || || ||||| || | || | Sbjct 2182341 AGTATGTCTCGGAATGAATGTTCTCCATCATAATCTGGAAGCCGTAAAAGCAGCGCGCCT 2182400 Query 37528 CAGATAATTGAACATCGTTAAAAAACCTCTTAGCTAAGTTTTCATTAACTATCCCATCAC 37587 ||| | ||| || ||||| |||| | || | | || || || || || ||||| Sbjct 2182401 CAGCGACTTGCACTTCGTTTGAAAAGCGCTCCACGAGATTCTCGTTCACAATGCCATCGG 2182460 Query 37588 TAGCTGCAAAGAAAGCAAGAACAT 37611 | || ||||| |||||||||| Sbjct 2182461 AGCCAGCGAAGAAGGCAAGAACAT 2182484 Score = 87.8 bits (96), Expect = 2e-12 Identities = 336/527 (64%), Gaps = 3/527 (1%) Strand=Plus/Minus Query 37173 AAACATGCAAAATCACAATGTAAACCTTCATCTCTACTTATCAATTCATTAGAAAAGGTT 37232 || |||||||| || ||| | ||| || || | || || | ||||| || || || Sbjct 2184300 AAGCATGCAAAGTCGGTATGCATACCCTCGTCACGGCTGATAAGCTCATTTGAGAACGTG 2184241 Query 37233 AATCCTGGCATTAAACCTCtttttttAATCCAAAATATTGCTGCAAAAGATCCAGAAAAG 37292 | || ||||| || ||||| || || | ||| || || | ||||||||||| |||||| Sbjct 2184240 AGACCAGGCATCAAGCCTCTCTTCTTCAGCCAGAAAATCGAGGCAAAAGATCCTGAAAAG 2184181 Query 37293 AAAATACCTTCAACTGCTGCAAATGCTACAAGACGTGTACCGAAAGTTGAACTATAATCA 37352 || ||||| ||||| || || || || || || || | |||| | || | | || Sbjct 2184180 AAGATACCCTCAACAGCAGCGAAGGCAACGAGCCGCTCAGCGAACGCAGATTTCTGGTCC 2184121 Query 37353 GAAATCCAtttttttGTCCAATCTGCCTTTAATTTAACACATTCAATTGTTTCAATTGCT 37412 || ||||| | ||| || ||||| || | ||| ||| || ||||| || Sbjct 2184120 GAGATCCACCGCAGCGCCCAGTCAGCCTTCTTCTTGATGCATGGAATAGTGTCAATAGCA 2184061 Query 37413 TTTAAGAGAAAGtttttttCTTCACTATCTGTTATATAAGTATCAATTAGTAAACTATAC 37472 | || || | | || || | || ||||| || || || | | || Sbjct 2184060 TCGAAAAGGTGCTCCCGCTGCGCAGGGTCCTTGATGTAAGTGTCGATAAGAAGAGAGTAT 2184001 Query 37473 ATTTCAGAGTGAATATTTTCAATAGCTATCTGAAAACCATAAAAACACCTAGCTTCAGAT 37532 | ||||||||||| || || || || || ||||| || || || | || || | Sbjct 2184000 GTCTCAGAGTGAATGTTCTCCATCATGATTTGGAAACCGTAGAAGCAGCGGGCCTCGGCA 2183941 Query 37533 AATTGAACATCGTTAAAAAACCTCTTAGCTAAGTTTTCATTAACTATCCCATCACTAGCT 37592 | || || || || | || | || | | | ||| ||||| || || ||||| || Sbjct 2183940 ACCTGCACTTCATTCGAGAATCGCTCAACAAGGTTCTCATTGACGATGCCATCCGACGCA 2183881 Query 37593 GCAAAGAAAGCAAGAACATATTTTATAAAATGTCTTT---CATCATTTGATAATTTTTTC 37649 ||||||||||||||||| | |||||| || | || | || || | || ||| Sbjct 2183880 GCAAAGAAAGCAAGAACGTGAGATATAAAGTGACGTTCGCCGTCGTTCATTCGGTTGTTC 2183821 Query 37650 CAATCATTAATATCTTTTGATAAATCAACTTCATCAACGGTCCAAAA 37696 || |||| | || || || | |||||| || || | ||||| || Sbjct 2183820 CAGTCATGGAGGTCCTTCGAGAGATCAACCTCCTCCATTGTCCAGAA 2183774 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 592314134574400