Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Taiwanofungus_20camphoratus_20[genbank_20GCA_5F000766995.1_202014- 10-15] 360 sequences; 32,155,604 total letters Query= NC_018875.1 Length=119082 Score E Sequences producing significant alignments: (Bits) Value seq328 129 4e-25 seq223 111 1e-19 >seq328 Length=1291088 Score = 129 bits (142), Expect = 4e-25 Identities = 160/219 (73%), Gaps = 0/219 (0%) Strand=Plus/Minus Query 48549 AGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGA 48608 || || | ||| | ||| || |||||||| || ||||| ||||||||||| ||| | || Sbjct 623159 AGACGGAGCACGAGATGGAGGGTGCTCTCCTTCTGAATGTTGTAATCAGAAAGAGTGCGG 623100 Query 48609 TCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCC 48668 |||| |||| |||||| ||||| || ||||| ||||| || || | || | |||||| Sbjct 623099 CCGTCTTCCAGCTGCTTGCCGGCGAAGATCAGACGCTGCTGGTCAGGAGGGATACCCTCC 623040 Query 48669 TTGTCGCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTA 48728 ||||| |||||| ||| ||| | | | || |||| |||||||| | || Sbjct 623039 TTGTCTTGAATCTTCGCTTTGACATTGTCGATGGTGTCAGACGATTCCACCTCAAGGGTG 622980 Query 48729 ATCGTTTTTCCCGTCAAAGTTTTTACAAAAATCTGCATC 48767 || || || |||||||| || || || |||||||||||| Sbjct 622979 ATAGTCTTCCCCGTCAACGTCTTCACGAAAATCTGCATC 622941 Score = 118 bits (130), Expect = 8e-22 Identities = 153/210 (73%), Gaps = 1/210 (0%) Strand=Plus/Minus Query 48558 ACCAA-ATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGATCGTCGTC 48616 ||||| ||| || |||||||| || ||||||||||| ||||| ||| | || |||| || Sbjct 622591 ACCAAGATGGAGTGTGCTCTCCTTCTGAATATTGTAGTCAGAGAGAGTACGGCCGTCCTC 622532 Query 48617 CAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCCTTGTCGCT 48676 || |||||| ||||| || |||| || |||||||| | || | ||| |||||||| Sbjct 622531 CAGCTGCTTGCCGGCGAAGATCAAACGTTGTTGATCAGGCGGGATGCCTTCCTTGTCCTG 622472 Query 48677 AATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTAATCGTTTT 48736 ||||| || ||| | | | || || | ||||||||| | || || || || Sbjct 622471 TATCTTGGCCTTGACATTGTCGATGGTATCAGAAGACTCCACCTCAAGGGTGATAGTCTT 622412 Query 48737 TCCCGTCAAAGTTTTTACAAAAATCTGCAT 48766 ||| ||||| || || || ||||||||||| Sbjct 622411 TCCAGTCAATGTCTTGACGAAAATCTGCAT 622382 Score = 107 bits (118), Expect = 1e-18 Identities = 146/204 (72%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 48564 TGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGATCGTCGTCCAACTGC 48623 || || |||||||| || ||||||||||| || || ||| | || |||| |||||||| Sbjct 622306 TGCAGAGTGCTCTCCTTCTGAATATTGTAGTCGGAAAGAGTGCGGCCGTCCTCCAACTGT 622247 Query 48624 TTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCCTTGTCGCTAATCTTT 48683 || || || || || || ||||| ||||| | |||| |||||||||||| ||||| Sbjct 622246 TTGCCAGCGAAGATAAGACGCTGCTGATCGGGAGGAATGCCCTCCTTGTCTTGGATCTTC 622187 Query 48684 TGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTAATCGTTTTTCCCGTC 48743 || || | | | | || || | ||||||||| | ||| || || || ||||| Sbjct 622186 GCCTTCACGTTATCGATGGTGTCAGAAGACTCCACCTCGAGCGTGATAGTCTTGCCCGTA 622127 Query 48744 AAAGTTTTTACAAAAATCTGCATC 48767 | || || || || ||||||||| Sbjct 622126 AGGGTCTTGACGAAGATCTGCATC 622103 >seq223 Length=1670925 Score = 111 bits (122), Expect = 1e-19 Identities = 139/191 (73%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 48576 TCTTTTTGAATATTGTAATCAGATAGACTTCGATCGTCGTCCAACTGCTTACCGGCAAAT 48635 || || ||||||||||||||||| || | || | || || | ||||| || ||||| Sbjct 1064915 TCCTTCTGAATATTGTAATCAGACAGCGTCCGGCCATCCTCAAGTTGCTTTCCAGCAAAG 1064974 Query 48636 ATCAGTCGCTGTTGATCCGTGGGAACGCCCTCCTTGTCGCTAATCTTTTGTTTTACAGAA 48695 ||||| || || ||||| | || | ||||||||||| ||||||| ||| || | Sbjct 1064975 ATCAGACGTTGCTGATCTGGAGGGATACCCTCCTTGTCCTGAATCTTTGCTTTCACGTTA 1065034 Query 48696 CCCACAGACTCTGACGCCTCCACCTCCACCGTAATCGTTTTTCCCGTCAAAGTTTTTACA 48755 | | || || |||| ||| ||||| | |||||||| || || || | ||| || ||| Sbjct 1065035 TCGATAGTGTCCGACGACTCAACCTCAAGTGTAATCGTCTTGCCAGTGAGAGTCTTCACA 1065094 Query 48756 AAAATCTGCAT 48766 ||||||||||| Sbjct 1065095 AAAATCTGCAT 1065105 Score = 98.7 bits (108), Expect = 8e-16 Identities = 137/192 (71%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 48575 CTCTTTTTGAATATTGTAATCAGATAGACTTCGATCGTCGTCCAACTGCTTACCGGCAAA 48634 ||| || |||||||||||||| || || ||| | |||| || | |||||| || || || Sbjct 1064405 CTCCTTCTGAATATTGTAATCCGAGAGCGTTCTACCGTCCTCGAGCTGCTTGCCAGCGAA 1064464 Query 48635 TATCAGTCGCTGTTGATCCGTGGGAACGCCCTCCTTGTCGCTAATCTTTTGTTTTACAGA 48694 |||| |||||||| || | |||| ||| ||||| || ||||||| || || Sbjct 1064465 GATCAAGCGCTGTTGGTCTGGCGGAATGCCTTCCTTATCCTGAATCTTTGCCTTCACGTT 1064524 Query 48695 ACCCACAGACTCTGACGCCTCCACCTCCACCGTAATCGTTTTTCCCGTCAAAGTTTTTAC 48754 | | | | ||||| | ||| ||||||| ||| || || || || || | || || || Sbjct 1064525 ATCGATCGTGTCTGATGACTCGACCTCCAACGTGATGGTCTTGCCGGTAAGCGTCTTCAC 1064584 Query 48755 AAAAATCTGCAT 48766 |||||| ||||| Sbjct 1064585 AAAAATTTGCAT 1064596 Score = 93.3 bits (102), Expect = 3e-14 Identities = 146/209 (70%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 48558 ACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGATCGTCGTCC 48617 |||| ||||| ||| || || ||||| |||||||| || | | ||| | || || Sbjct 1065125 ACCAGATGTAAAGTGGATTCCTTCTGAATGTTGTAATCGGACAACGTGCGACCATCCTCG 1065184 Query 48618 AACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCCTTGTCGCTA 48677 | |||||| || || || || || |||||||| || | ||||| ||||||||||| | Sbjct 1065185 AGCTGCTTTCCAGCGAAAATGAGACGCTGTTGGTCAGGGGGAATACCCTCCTTGTCCTGA 1065244 Query 48678 ATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTAATCGTTTTT 48737 ||||| || || | | | | || |||| ||| ||||| | ||| || || || Sbjct 1065245 ATCTTGGCCTTGACGTTATCGATTGTGTCAGACGACTCGACCTCGAGCGTGATGGTCTTG 1065304 Query 48738 CCCGTCAAAGTTTTTACAAAAATCTGCAT 48766 ||||| | || || ||||| |||||||| Sbjct 1065305 CCCGTGAGGGTCTTCACAAATATCTGCAT 1065333 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 380935928636280