Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Taiwanofungus_20camphoratus_20[genbank_20GCA_5F000766995.1_202014- 10-15] 360 sequences; 32,155,604 total letters Query= NC_020104.1 Length=1021348 Score E Sequences producing significant alignments: (Bits) Value seq223 131 1e-24 seq328 118 7e-21 seq339 93.3 3e-13 >seq223 Length=1670925 Score = 131 bits (144), Expect = 1e-24 Identities = 154/206 (75%), Gaps = 2/206 (1%) Strand=Plus/Plus Query 480565 CAAGATGAAGTGTACTTTCTTTAGAAACATTATAATCAGCTAGAGTTCTGTTATCTTCAA 480624 |||| ||||| ||| ||| || || ||| ||||||| || || | | ||| |||| Sbjct 1064898 CAAGGTGAAGGGTAGATTCCTTCTGAATATTGTAATCAGACAGCGTCCGGCCATCCTCAA 1064957 Query 480625 GTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCCTTCCTTGTCTTGAA 480684 |||||||||||||||| || |||||||| ||||| ||||| || || |||||||| |||| Sbjct 1064958 GTTGCTTTCCAGCAAAGATCAGACGTTGCTGATCTGGAGGGATACCCTCCTTGTCCTGAA 1065017 Query 480685 TCTTTTGTTTGACAGCTTCAATAGTATCAG-TGTGTGAAGTTTCAAGGGTAATAGTTTTA 480743 ||||| ||| || || ||||| || | | | || ||||| ||||| || || Sbjct 1065018 TCTTTGCTTTCACGTTATCGATAGTGTCCGACGACTCAA-CCTCAAGTGTAATCGTCTTG 1065076 Query 480744 CCGGTGAGAGTCTTAACGAAAATTTG 480769 || ||||||||||| || ||||| || Sbjct 1065077 CCAGTGAGAGTCTTCACAAAAATCTG 1065102 Score = 111 bits (122), Expect = 1e-18 Identities = 158/220 (72%), Gaps = 2/220 (1%) Strand=Plus/Plus Query 480551 ACGAAGACGGAGTACAAGATGAAGTGTACTTTCTTTAGAAACATTATAATCAGCTAGAGT 480610 ||| || || ||||| ||||| || ||| || || || ||||| || | || || Sbjct 1064603 ACGCAGCCGTAGTACGAGATGGAGGGTAGACTCCTTCTGAATGTTATAGTCGGAAAGGGT 1064662 Query 480611 TCTGTTATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCC 480670 | |||||| ||||||||||||||||| || || ||||| |||||||||||||| || Sbjct 1064663 CCGCCCATCTTCGAGTTGCTTTCCAGCAAAGATGAGGCGTTGCTGATCAGGAGGAATGCC 1064722 Query 480671 TTCCTTGTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCAG-TGTGTGAAGTTTCAA 480729 ||||||||| |||||||| |||||| || || ||||| | | | | || | Sbjct 1064723 TTCCTTGTCCTGAATCTTAGCTTTGACGTTGTCGATCGTATCGGACGACTCGA-CCTCGA 1064781 Query 480730 GGGTAATAGTTTTACCGGTGAGAGTCTTAACGAAAATTTG 480769 | || || || || || ||||||||||| || || || || Sbjct 1064782 GTGTGATCGTCTTGCCAGTGAGAGTCTTCACAAAGATCTG 1064821 >seq328 Length=1291088 Score = 118 bits (130), Expect = 7e-21 Identities = 157/218 (72%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 480552 CGAAGACGGAGTACAAGATGAAGTGTACTTTCTTTAGAAACATTATAATCAGCTAGAGTT 480611 ||||||||||| || ||||| || || || || || || || ||||||| ||||| Sbjct 623162 CGAAGACGGAGCACGAGATGGAGGGTGCTCTCCTTCTGAATGTTGTAATCAGAAAGAGTG 623103 Query 480612 CTGTTATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCCT 480671 | | ||||| || ||||| || || || || ||||| || || |||||||| || || Sbjct 623102 CGGCCGTCTTCCAGCTGCTTGCCGGCGAAGATCAGACGCTGCTGGTCAGGAGGGATACCC 623043 Query 480672 TCCTTGTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCAGTGTGTGAAGTTTCAAGG 480731 ||||||||||||||||| ||||||| || || || |||| | |||||| Sbjct 623042 TCCTTGTCTTGAATCTTCGCTTTGACATTGTCGATGGTGTCAGACGATTCCACCTCAAGG 622983 Query 480732 GTAATAGTTTTACCGGTGAGAGTCTTAACGAAAATTTG 480769 || ||||| || || || | ||||| |||||||| || Sbjct 622982 GTGATAGTCTTCCCCGTCAACGTCTTCACGAAAATCTG 622945 Score = 104 bits (114), Expect = 2e-16 Identities = 148/206 (72%), Gaps = 2/206 (1%) Strand=Plus/Minus Query 480565 CAAGATGAAGTGTACTTTCTTTAGAAACATTATAATCAGCTAGAGTTCTGTTATCTTCAA 480624 ||||||| ||||| || || || || ||| || |||| ||||| | | || || | Sbjct 622589 CAAGATGGAGTGTGCTCTCCTTCTGAATATTGTAGTCAGAGAGAGTACGGCCGTCCTCCA 622530 Query 480625 GTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCCTTCCTTGTCTTGAA 480684 | ||||| || || || || | ||||||||||||||| || || ||||||||||| || | Sbjct 622529 GCTGCTTGCCGGCGAAGATCAAACGTTGTTGATCAGGCGGGATGCCTTCCTTGTCCTGTA 622470 Query 480685 TCTTTTGTTTGACAGCTTCAATAGTATCAG-TGTGTGAAGTTTCAAGGGTAATAGTTTTA 480743 |||| |||||| || || ||||||| | | | |||||||| ||||| || Sbjct 622469 TCTTGGCCTTGACATTGTCGATGGTATCAGAAGACTCCA-CCTCAAGGGTGATAGTCTTT 622411 Query 480744 CCGGTGAGAGTCTTAACGAAAATTTG 480769 || || | ||||| |||||||| || Sbjct 622410 CCAGTCAATGTCTTGACGAAAATCTG 622385 >seq339 Length=1233777 Score = 93.3 bits (102), Expect = 3e-13 Identities = 99/131 (76%), Gaps = 0/131 (0%) Strand=Plus/Plus Query 474746 ACTGTTCCAGCATATTTTAATGATTCTCAACGTCAAGCAACTAAAGATGCGGGAAGAATT 474805 || ||||| || || || ||||| || |||||||||||||| || || || || | || Sbjct 27061 ACCGTTCCCGCTTACTTCAATGACTCGCAACGTCAAGCAACAAAGGACGCTGGTACGATC 27120 Query 474806 GCAGGTCTTAATGTTTTACGTATTATTAATGAACCAACAGCAGCCGCACTTGCTTATGGT 474865 | ||||| || || | ||||| |||||||| || || || || || ||||||||||| Sbjct 27121 TCCGGTCTCAACGTCCTCCGTATCATTAATGAGCCTACCGCGGCTGCCATTGCTTATGGT 27180 Query 474866 CTTGATAAGAA 474876 || || ||||| Sbjct 27181 CTCGACAAGAA 27191 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3268163757853280