Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Taiwanofungus_20camphoratus_20[genbank_20GCA_5F000766995.1_202014- 10-15] 360 sequences; 32,155,604 total letters Query= NC_021247.1 Length=228750 Score E Sequences producing significant alignments: (Bits) Value seq328 86.0 9e-12 seq1 84.2 3e-11 >seq328 Length=1291088 Score = 86.0 bits (94), Expect = 9e-12 Identities = 128/182 (70%), Gaps = 0/182 (0%) Strand=Plus/Plus Query 155823 ATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTCT 155882 ||||| || || | || |||||||||||||| ||||| || | || || || |||| Sbjct 622382 ATGCAGATTTTCGTCAAGACATTGACTGGAAAGACTATCACCCTTGAGGTGGAGTCTTCT 622441 Query 155883 GATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACAA 155942 |||| || || || || || ||||| || || |||||||| || || || ||| Sbjct 622442 GATACCATCGACAATGTCAAGGCCAAGATACAGGACAAGGAAGGCATCCCGCCTGATCAA 622501 Query 155943 CAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTATAAT 156002 ||| | ||||| | ||||| |||||||| || || | | ||| | || || || ||| Sbjct 622502 CAACGTTTGATCTTCGCCGGCAAGCAGCTGGAGGACGGCCGTACTCTCTCTGACTACAAT 622561 Query 156003 AT 156004 || Sbjct 622562 AT 622563 >seq1 Length=2218769 Score = 84.2 bits (92), Expect = 3e-11 Identities = 293/453 (65%), Gaps = 8/453 (2%) Strand=Plus/Plus Query 18145 ATAATATAATAAACACGCAAAATCAGTGTGTAAACCTTCATCTCTGGAT-ATTAATTCGT 18203 || ||| || | |||||||||||||| || | || || || | |||| || | || | Sbjct 2182036 ATGATACAACAGGCACGCAAAATCAGTATGCATTCCCTCGTCGC-GGATAATCAGCTCAT 2182094 Query 18204 TACTAAACGTTAACCCGGGCATTATACCTCttttttttAGCCAAAATATCGATGCGAAAC 18263 | ||||| | || ||||| | ||| ||||| || ||||| ||||| ||||| || Sbjct 2182095 TGGAGAACGTCAGGCCAGGCATGAGACCCCTTTTCTTGAGCCAGAATATGGATGCAAAGG 2182154 Query 18264 TACTAGAAAAGAATATACCCTCAACGCACGCGAACGCTATTAATCTTTCAGCAAAACTGT 18323 | || |||||||| || || || |||||| || | | | || || || || Sbjct 2182155 AGCCGGAGAAGAATATGCCTTCGACAGCCGCGAAAGCGACAAGCCGCTCCGCGAACGTGG 2182214 Query 18324 ATTTATTGCTCAG-TATCCATTTTTGTGCCCATTCTCCTTNNNNNNNNATACACGGTATA 18382 ||| ||| |||| |||||| ||||||| || | | ||||| || || Sbjct 2182215 ATTCCTTG-TCAGAAATCCATCGCAGTGCCCAGTCAGCCTTTTTTTTAATACATGGGATG 2182273 Query 18383 CTCTCTATAGCATTAAACAAATCAT--CTTTTTCTTTGGAATCTTTTATATAAGTGTCGA 18440 |||| || |||| ||||||| | | || | |||| || || || || ||||| | Sbjct 2182274 GTCTCGATCGCATCGAACAAATGGTCCCGTTGTTGTTGG--TCCTTGATGTATGTGTCAA 2182331 Query 18441 TTAACAAAGAATACATTTCAGAATGTATGCTTTCCATAGCTATCTGAAAACTATAAAACG 18500 | | || ||| || | || ||||| ||| | ||||| ||||| || | ||||| Sbjct 2182332 TGAGCAGAGAGTATGTCTCGGAATGAATGTTCTCCATCATAATCTGGAAGCCGTAAAAGC 2182391 Query 18501 ATCTAGCCTCGGGATATTGAATCTCGCTATAAAATCTTTCTACCAAATTCTCATTAACTA 18560 | | ||||| | ||| | ||| | |||| | || || | |||||| || || | Sbjct 2182392 AGCGCGCCTCAGCGACTTGCACTTCGTTTGAAAAGCGCTCCACGAGATTCTCGTTCACAA 2182451 Query 18561 TACCGTCAGCAGATGCGAAAAATGCCAAAACAT 18593 | || || | ||||| || || | ||||| Sbjct 2182452 TGCCATCGGAGCCAGCGAAGAAGGCAAGAACAT 2182484 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 731868706576000