Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Taiwanofungus_20camphoratus_20[genbank_20GCA_5F000766995.1_202014- 10-15] 360 sequences; 32,155,604 total letters Query= NC_021248.1 Length=307691 Score E Sequences producing significant alignments: (Bits) Value seq223 91.5 3e-13 >seq223 Length=1670925 Score = 91.5 bits (100), Expect = 3e-13 Identities = 158/230 (69%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 192307 ATACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCA 192366 ||||| || | || |||| ||| | ||| | |||| ||| || || ||||| || Sbjct 1064595 ATACCGCCACGCAGCCGTAGTACGAGATGGAGGGTAGACTCCTTCTGAATGTTATAGTCG 1064654 Query 192367 GATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGT 192426 || | || || |||| || | ||| || ||||||||||| | | || |||||||| Sbjct 1064655 GAAAGGGTCCGCCCATCTTCGAGTTGCTTTCCAGCAAAGATGAGGCGTTGCTGATCAGGA 1064714 Query 192427 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCT 192486 || || ||||| || || || || ||| ||| || || || | ||| ||||| || Sbjct 1064715 GGAATGCCTTCCTTGTCCTGAATCTTAGCTTTGACGTTGTCGATCGTATCGGACGACTCG 1064774 Query 192487 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCAT 192536 || || || || || || || ||||| | || || | ||| |||||||| Sbjct 1064775 ACCTCGAGTGTGATCGTCTTGCCAGTGAGAGTCTTCACAAAGATCTGCAT 1064824 Score = 86.0 bits (94), Expect = 1e-11 Identities = 128/182 (70%), Gaps = 0/182 (0%) Strand=Plus/Plus Query 192355 ATATTATAATCAGATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTC 192414 ||||| |||||||| | || || |||| || | ||| || ||||||||||| | | Sbjct 1064924 ATATTGTAATCAGACAGCGTCCGGCCATCCTCAAGTTGCTTTCCAGCAAAGATCAGACGT 1064983 Query 192415 TGTTGATCAGGTGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAA 192474 || ||||| || || || || || || || || || || ||| || ||| |||| Sbjct 1064984 TGCTGATCTGGAGGGATACCCTCCTTGTCCTGAATCTTTGCTTTCACGTTATCGATAGTG 1065043 Query 192475 TCTGACGATTCTACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGC 192534 || ||||| || || || || ||||| || || ||||| | || || | ||| |||||| Sbjct 1065044 TCCGACGACTCAACCTCAAGTGTAATCGTCTTGCCAGTGAGAGTCTTCACAAAAATCTGC 1065103 Query 192535 AT 192536 || Sbjct 1065104 AT 1065105 Score = 84.2 bits (92), Expect = 4e-11 Identities = 157/231 (68%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 192307 ATACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCA 192366 |||||||| | ||||| | || | ||||||||| | || || || || ||||| Sbjct 1065104 ATACCACCGCGGAGACGAAGGACCAGATGTAAAGTGGATTCCTTCTGAATGTTGTAATCG 1065163 Query 192367 GATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGT 192426 || || || || |||| || | || || ||||| || || | | |||||| ||||| Sbjct 1065164 GACAACGTGCGACCATCCTCGAGCTGCTTTCCAGCGAAAATGAGACGCTGTTGGTCAGGG 1065223 Query 192427 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCT 192486 || || || || || || || || || || || ||| || | || ||||| || Sbjct 1065224 GGAATACCCTCCTTGTCCTGAATCTTGGCCTTGACGTTATCGATTGTGTCAGACGACTCG 1065283 Query 192487 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCATT 192537 || || || || ||||| || || || | || || | ||||||||||||| Sbjct 1065284 ACCTCGAGCGTGATGGTCTTGCCCGTGAGGGTCTTCACAAATATCTGCATT 1065334 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 984475459086000