Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Taiwanofungus_20camphoratus_20[genbank_20GCA_5F000766995.1_202014- 10-15] 360 sequences; 32,155,604 total letters Query= NC_021312.1 Length=459984 Score E Sequences producing significant alignments: (Bits) Value seq306 120 9e-22 seq223 118 3e-21 seq317 102 2e-16 >seq306 Length=1616116 Score = 120 bits (132), Expect = 9e-22 Identities = 244/357 (68%), Gaps = 8/357 (2%) Strand=Plus/Minus Query 133304 GCCGAAGCCCGTGCCTTTTATGGGCTACAGATTGCGATGGAAAATATCCATTCTATCACA 133363 || ||||| || ||| ||||| | ||||| |||||| || || || || ||| Sbjct 904506 GCAGAAGCGCGATGCTTCTATGGCTTCCAGATCATGATGGAGAACATTCACTCCGAGACA 904447 Query 133364 TATTCTACTCTAATTGATACTTACATCAAAGATACCGTCCAGAAGCACAAAC---TATTC 133420 || || ||| || |||||||||||||| || || || || ||| ||| | || Sbjct 904446 TACTCCCTTCTCATCGATACTTACATCAAGGA--CCCTC-AGCAGCGAGAACATCTCTTT 904390 Query 133421 AACGCCATTAGCGAATTTCCTTGTATTAAAAAGAAATCTGACTGGGCTATTAAATGGATC 133480 |||||||| | | |||||||| || ||||| |||||||||| | ||||| Sbjct 904389 GACGCCATTGACACCATCCCTTGTATCAAGAAGAAGGCTGACTGGGCATTGCGGTGGATT 904330 Query 133481 CAGGACAAGCGTGCGAGTTTTGCTACTCGTCTCGTTGCTTTTGCTGTAGTAGAGGGCAtt 133540 ||| ||| | | |||||| || |||||||| ||||||| ||||||||||||| Sbjct 904329 TCGGATAAGAAGTCTACATTTGCTGAGCGACTCGTTGCCTTTGCTGCAGTAGAGGGCATT 904270 Query 133541 tttttCAGTGGTGCGTTCTGC-TCTATTTTTTGGCTTAAAAAGCGTGGTATTCTACCTGG 133599 || ||| ||| | || ||| || ||||| ||||| || |||||||| | | ||||| Sbjct 904269 TTCTTCTCTGGGTCCTT-TGCGTCCATTTTCTGGCTCAAGAAGCGTGGCCTGATGCCTGG 904211 Query 133600 ACTGTGTTTTTCTAACGAACTTATTTCAAGGGACGAGGCACTTCACACCGAATTTGC 133656 ||| || || || || || || | || |||| | |||||||| ||||| Sbjct 904210 TCTGACGTTCTCGAATGAGCTGATAAGTCGTGATGAGGGCATGCACACCGACTTTGC 904154 >seq223 Length=1670925 Score = 118 bits (130), Expect = 3e-21 Identities = 146/200 (73%), Gaps = 0/200 (0%) Strand=Plus/Minus Query 289027 TTACCAACAGCATCAATTTCGTCAATGAAAATCACACACGGAGAATTTTGTCTCGCAATT 289086 || |||| ||||||||||||||| ||||| || | |||| | || | | | ||| Sbjct 338802 TTTCCAATAGCATCAATTTCGTCGATGAAGATGATGGACGGCGCGTTCTTTTTTGCAGAA 338743 Query 289087 GCAAATAATTCTCTTACACGGGATGCTCCAAGACCAACATACATTTCTACAAATTCAGAA 289146 ||||| | || | |||||||| | ||||| |||||| |||| || || || || ||| Sbjct 338742 GCAAACAGATCACGAACACGGGAAGATCCAACACCAACGAACATCTCGACGAACTCGGAA 338683 Query 289147 GCGGATACTTGAATGAATGTTACATTTGCTTCGCCTGCTACTGCCCTCGCCAGAAGTGTC 289206 |||| ||| | ||| | ||||| || |||||||| |||| |||| || || ||| Sbjct 338682 CCGGAGACTGAGAGGAAGGGCACATTGGCCTCGCCTGCAGTTGCCTTCGCAAGCAGGGTC 338623 Query 289207 TTACCTGTTCCAGGTGGTCC 289226 ||||| ||||||||||| || Sbjct 338622 TTACCCGTTCCAGGTGGACC 338603 >seq317 Length=1568814 Score = 102 bits (112), Expect = 2e-16 Identities = 113/148 (76%), Gaps = 6/148 (4%) Strand=Plus/Minus Query 251843 CGATAGTCATACGACTGGGAATAGCATGGGGATTGATGATGATGTCGGGTTTCAGTCCAT 251902 |||| ||||| || |||||| ||||| || || ||||| | |||||| | | || | Sbjct 82013 CGATTGTCATGCGGGAGGGAATGGCATGCGGGTTAATGATAAGATCGGGTGTAATACCTT 81954 Query 251903 CAGCAGTGAAGGGCATATCCTTTTCCT--CAATAA-TGTTTCCAATAGTTCCCTTTTGTC 251959 | || ||||||||||| |||| ||| | ||| || | ||||||||||| ||||| | Sbjct 81953 CCGCTGTGAAGGGCATGTCCT---CCTGGCGATATGTGATACCAATAGTTCCTTTTTGAC 81897 Query 251960 CGTGACGAGAACTGAACTTATCACCAAT 251987 ||||||||||| |||||| |||||||| Sbjct 81896 CGTGACGAGAAGCGAACTTGTCACCAAT 81869 Score = 93.3 bits (102), Expect = 1e-13 Identities = 176/259 (68%), Gaps = 4/259 (2%) Strand=Plus/Minus Query 251397 GTATGAGGCGATAAGACCACACTTA----TTACACACATGGACGCTGTAAGCATCAGATG 251452 ||||||| ||| | | |||||| | ||| ||||| | | ||||||||| | Sbjct 82463 GTATGAGACGAGATGTGGTCACTTACATGTCACAAACATGCAATCGATAAGCATCACTGG 82404 Query 251453 CGTCATATAGCCGACCCTTGGTGAAGCGAGATGCACCGTGTGAAATCATACAATCACGCT 251512 | ||| | || || ||||| ||| || | || || |||||||| || ||||||| Sbjct 82403 CTTCAAACAGACGCTCCTTGAGGAAAGCAGCAACGCCATGAGAAATCATGCAGTCACGCT 82344 Query 251513 CCATTTCACCGAAACGAAGACCACCATCGCGAGCCCTACCCTCGGCAGGCTGACGAGTGA 251572 |||| || ||||| || || ||||| || ||| | ||||||| | ||||| | |||| Sbjct 82343 CCATCTCTCCGAACCGCAGTCCACCGTCACGACTACGACCCTCGACCGGCTGCCTGGTGA 82284 Query 251573 GATTAACCATAGGACCGATGGAGCGGCTATGTTGCTTATCATTTACCATATGCTTGAGAC 251632 || | || ||| || | | || ||| || |||| ||||| |||||||| | Sbjct 82283 GAATCTGCACAGGGCCTCTTGCACGTGAATGAATTTTGTCATCCACCATGTGCTTGAGCC 82224 Query 251633 GCTGGTAGAATGCGGGACC 251651 |||| ||| | | |||||| Sbjct 82223 GCTGATAGTAAGTGGGACC 82205 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1471810811241320