Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Taiwanofungus_20camphoratus_20[genbank_20GCA_5F000766995.1_202014- 10-15] 360 sequences; 32,155,604 total letters Query= NC_021858.1 Length=1908524 Score E Sequences producing significant alignments: (Bits) Value seq306 109 7e-18 seq1 98.7 1e-14 >seq306 Length=1616116 Score = 109 bits (120), Expect = 7e-18 Identities = 202/289 (70%), Gaps = 13/289 (4%) Strand=Plus/Plus Query 869180 CCTTCGTCGCGACTGATCATTTCGTTGCTAAAGGCGAGGCCGGGCATGAGGCCGCGCTTC 869239 || || || ||||| |||| || || || | || || ||||| ||||| |||||| Sbjct 904172 CCCTCATCACGACTTATCAGCTCATTCGAGAACGTCAGACCAGGCATCAGGCCACGCTTC 904231 Query 869240 TTGAGCCAAAAGATGG-CGCAGAAACTGCCCGAGAAAAAGATGCCCTCGACGGCGGCAAA 869298 |||||||| || |||| |||| || || ||||| || |||||||| || || ||||| Sbjct 904232 TTGAGCCAGAAAATGGACGCA-AAGGACCCAGAGAAGAAAATGCCCTCTACTGCAGCAAA 904290 Query 869299 GCCGATGAGCCGCTCGGCAAAGGTGTCGAGGCCCTCCTTGT---TGATCCACTTCATCGC 869355 | | | ||| ||||| ||||| ||| || || ||| | |||||| || || Sbjct 904291 GGCAACGAGTCGCTCAGCAAA--TGTAGA----CTTCTTATCCGAAATCCACCGCAATGC 904344 Query 869356 CCAGTCGGCCTTTTTCCTCACCGACGGCACCGTGTCGATGGCGCGAAAGAGGTGGTC-CT 869414 |||||| ||||| ||| | | | || | ||||| |||||| |||||| || || | Sbjct 904345 CCAGTCAGCCTTCTTCTTGATACAAGGGATGGTGTCAATGGCGTCAAAGAGATGTTCTCG 904404 Query 869415 TTTCGGCCGGGTCCTTGACATAGGTGTCGATCAGGAGCGAATAGGTCTC 869463 | | | |||||||||| || || ||||| || || || || ||||| Sbjct 904405 CTGCTG-AGGGTCCTTGATGTAAGTATCGATGAGAAGGGAGTATGTCTC 904452 Score = 89.7 bits (98), Expect = 6e-12 Identities = 133/187 (71%), Gaps = 4/187 (2%) Strand=Plus/Plus Query 868691 GCCTTGGCGTACTCGCCCACGCGCCGCTCGAAAAAGTTGGTCTTGCCCTCGAGCGAGATC 868750 ||||| || || || || ||| |||||| ||||||||||| || | | |||||| Sbjct 903806 GCCTTCGCATAATCAGATACACGCTTCTCGAAGAAGTTGGTCTTCCCTTGCAATGAGATC 903865 Query 868751 AACTCCATCCACGGGAACGGGTTGGGCGTCTTGTAGTGCTTTTCGCATC--CGAGCGACG 868808 | ||||| | || ||||| | | |||||| ||| || ||| |||| | Sbjct 903866 ATGTCCATGAAGTCAAAGGGGTTCGTGGAATTGTAGATCTT--CGGATCACCGAGTGCGA 903923 Query 868809 CGAGCAGGCGGTCGGCGACAAACTCGATGTACTGGCACATGAGGCCGGCGTTCATGCCGA 868868 | || ||||| ||||||||||| ||||||||||||||||| ||||||||||| | Sbjct 903924 AAACCAATCGGTCCGCGACAAACTCAATGTACTGGCACATGAGTTTCGCGTTCATGCCAA 903983 Query 868869 TGAGCGC 868875 ||||||| Sbjct 903984 TGAGCGC 903990 >seq1 Length=2218769 Score = 98.7 bits (108), Expect = 1e-14 Identities = 119/160 (74%), Gaps = 4/160 (3%) Strand=Plus/Plus Query 868718 TCGAAAAAGTTGGTCTTGCCCTCGAGCGAGATCAACTCCATCCACGGGAACGGGTTGGG- 868776 || |||||||| |||||||||| | || |||| ||||| | |||||| |||| Sbjct 2181715 TCAAAAAAGTTTGTCTTGCCCTGCAAGGATATCATATCCATGAAATCGAACGGATTGGTG 2181774 Query 868777 -CGTCTTGTAGTGCTTTTCGCATCCGAGCGACGCGAGCAGGCGGTCGGCGACAAACTCGA 868835 |||| ||||||||| | |||||| ||| |||| |||||||| ||||| || |||| Sbjct 2181775 ACGTC--GTAGTGCTTGTTATTTCCGAGGGACACGAGAAGGCGGTCTGCGACGAATTCGA 2181832 Query 868836 TGTACTGGCACATGAGGCCGGCGTTCATGCCGATGAGCGC 868875 ||||||||||||| | || ||||| || || ||||| Sbjct 2181833 TGTACTGGCACATCAACGTCGCATTCATACCTATAAGCGC 2181872 Score = 86.0 bits (94), Expect = 8e-11 Identities = 201/299 (67%), Gaps = 11/299 (4%) Strand=Plus/Plus Query 869169 CACTATGCGAACCTTCGTCGCGACTGATCATTTCGTTGCTAAAGGCGAGGCCGGGCATGA 869228 || ||||| || |||||||| | |||| || ||| || | ||||| ||||||| Sbjct 2182059 CAGTATGCATTCCCTCGTCGCGGATAATCAGCTCATTGGAGAACGTCAGGCCAGGCATGA 2182118 Query 869229 GGCCGCGCTTCTTGAGCCAAAAGATGG-CGCAGAAACTGCCCGAGAAAAAGATGCCCTCG 869287 | || | ||||||||||| || |||| ||| || ||| ||||| || ||||| ||| Sbjct 2182119 GACCCCTTTTCTTGAGCCAGAATATGGATGCA-AAGGAGCCGGAGAAGAATATGCCTTCG 2182177 Query 869288 ACGGCGGCAAAGCCGATGAGCCGCTCGGCAAAGGTGTCGAGGCCCTCCTTGT---TGATC 869344 || || || || ||| |||||||| || || ||| || ||||||| ||| Sbjct 2182178 ACAGCCGCGAAAGCGACAAGCCGCTCCGCGAACGTG--GA----TTCCTTGTCAGAAATC 2182231 Query 869345 CACTTCATCGCCCAGTCGGCCTTTTTCCTCACCGACGGCACCGTGTCGATGGCGCGAAAG 869404 || || |||||||| |||||||| | | | || | || ||||| || || Sbjct 2182232 CATCGCAGTGCCCAGTCAGCCTTTTTTTTAATACATGGGATGGTCTCGATCGCATCGAAC 2182291 Query 869405 AGGTGGTCCTTTTCGGCCGGGTCCTTGACATAGGTGTCGATCAGGAGCGAATAGGTCTC 869463 | |||||| || ||||||||| || ||||| || || || || || ||||| Sbjct 2182292 AAATGGTCCCGTTGTTGTTGGTCCTTGATGTATGTGTCAATGAGCAGAGAGTATGTCTC 2182350 Score = 86.0 bits (94), Expect = 8e-11 Identities = 119/167 (71%), Gaps = 0/167 (0%) Strand=Plus/Minus Query 868709 ACGCGCCGCTCGAAAAAGTTGGTCTTGCCCTCGAGCGAGATCAACTCCATCCACGGGAAC 868768 || ||| |||||| ||||| ||||| |||| |||||||||| ||||| | ||| Sbjct 2184620 ACACGCTTCTCGAAGAAGTTTGTCTTCCCCTGAAGCGAGATCATGTCCATAAAGTCGAAA 2184561 Query 868769 GGGTTGGGCGTCTTGTAGTGCTTTTCGCATCCGAGCGACGCGAGCAGGCGGTCGGCGACA 868828 || || | | | ||| |||| | ||||| | | | || | ||| ||||| Sbjct 2184560 GGATTCGTTGCGTGGTACACCTTTGGGTCGCCGAGGGTGACAATCAACCTGTCTGCGACG 2184501 Query 868829 AACTCGATGTACTGGCACATGAGGCCGGCGTTCATGCCGATGAGCGC 868875 ||||| || |||||||||||||| |||||||||||||||||||| Sbjct 2184500 AACTCAATATACTGGCACATGAGCTTAGCGTTCATGCCGATGAGCGC 2184454 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 6107109656714120