Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Taiwanofungus_20camphoratus_20[genbank_20GCA_5F000766995.1_202014- 10-15] 360 sequences; 32,155,604 total letters Query= NC_021923.1 Length=140633 Score E Sequences producing significant alignments: (Bits) Value seq223 105 6e-18 seq328 102 7e-17 >seq223 Length=1670925 Score = 105 bits (116), Expect = 6e-18 Identities = 145/203 (71%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 |||||||||||| | || || || || || || || || || ||||| || || | || Sbjct 1064824 ATGCAGATCTTTGTGAAGACTCTCACTGGCAAGACGATCACACTCGAGGTCGAGTCGTCC 1064765 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 || || | || | || ||| ||||| || ||||| ||||| || ||||| ||||| Sbjct 1064764 GATACGATCGACAACGTCAAAGCTAAGATTCAGGACAAGGAAGGCATTCCTCCTGATCAG 1064705 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 ||||| | |||||||| || || || || || ||| | | | | | || || |||||| Sbjct 1064704 CAACGCCTCATCTTTGCTGGAAAGCAACTCGAAGATGGGCGGACCCTTTCCGACTATAAC 1064645 Query 24884 ATTCAAAAGGAATCGACACTACA 24906 ||||| ||||| || || || || Sbjct 1064644 ATTCAGAAGGAGTCTACCCTCCA 1064622 >seq328 Length=1291088 Score = 102 bits (112), Expect = 7e-17 Identities = 116/156 (74%), Gaps = 0/156 (0%) Strand=Plus/Plus Query 24703 GATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCAC 24762 |||||||||||| | || || || || || || ||||| |||||||| || || | | Sbjct 622103 GATGCAGATCTTCGTCAAGACCCTTACGGGCAAGACTATCACGCTCGAGGTGGAGTCTTC 622162 Query 24763 CGACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822 ||||| | || | || || |||||||||||||| || || || ||||||||||| Sbjct 622163 TGACACCATCGATAACGTGAAGGCGAAGATCCAAGACAAGGAGGGCATTCCTCCCGATCA 622222 Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGA 24858 || ||| | ||||| || || |||||| ||||||| Sbjct 622223 GCAGCGTCTTATCTTCGCTGGCAAACAGTTGGAGGA 622258 Score = 87.8 bits (96), Expect = 2e-12 Identities = 146/210 (70%), Gaps = 1/210 (0%) Strand=Plus/Plus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 |||||||| || | || || | || || || ||||| || || || || || | | Sbjct 622382 ATGCAGATTTTCGTCAAGACATTGACTGGAAAGACTATCACCCTTGAGGTGGAGTCTTCT 622441 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 || || | || | || || ||||| || ||||| ||||| || || || |||||| Sbjct 622442 GATACCATCGACAATGTCAAGGCCAAGATACAGGACAAGGAAGGCATCCCGCCTGATCAA 622501 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 |||||||||||||| ||||| || ||||||||||| | | | || || || || Sbjct 622502 CAACGTTTGATCTTCGCCGGCAAGCAGCTGGAGGACGGCCGTACTCTCTCTGACTACAAT 622561 Query 24884 ATTCAAAAGGAATCGACACTACA-CTTGGT 24912 ||||| ||||| ||||| || |||||| Sbjct 622562 ATTCAGAAGGAGAGCACACTCCATCTTGGT 622591 Score = 86.0 bits (94), Expect = 6e-12 Identities = 139/194 (72%), Gaps = 6/194 (3%) Strand=Plus/Plus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||||||||| | || || || || || || || || || ||||| || ||| | | Sbjct 622661 ATGCAGATCTTCGTCAAGACTCTTACGGGCAAGACGATCACTCTCGAGGTCGAATCATCT 622720 Query 24764 GACACAGTAGA-AACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822 || || | || |||| ||| | ||||| |||||||| || || || ||||| || || Sbjct 622721 GATACCATCGACAACGTTAAGGC-GAAGATTCAAGACAAGGAGGGTATTCCTCCTGACCA 622779 Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGAT--TCGAGAAACATGTCAGATTAT 24880 || || ||||||| || || || |||||||||||| ||| | || | || || || Sbjct 622780 GCAGCGCCTGATCTTCGCTGGCAAGCAGCTGGAGGATGGTCG-TACAC-TCTCGGACTAC 622837 Query 24881 AACATTCAAAAGGA 24894 ||||| || ||||| Sbjct 622838 AACATCCAGAAGGA 622851 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 449895575460800