Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Taiwanofungus_20camphoratus_20[genbank_20GCA_5F000766995.1_202014- 10-15] 360 sequences; 32,155,604 total letters Query= NC_023442.1 Length=120420 Score E Sequences producing significant alignments: (Bits) Value seq223 114 1e-20 seq328 82.4 6e-11 >seq223 Length=1670925 Score = 114 bits (126), Expect = 1e-20 Identities = 166/232 (72%), Gaps = 2/232 (1%) Strand=Plus/Plus Query 29571 ACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGA 29630 ||| || |||| ||| | |||||||| || |||||||| ||||| | | |||||| Sbjct 1065118 ACGAAGGACCAGATGTAAAGTGGATTCCTTCTGAATGTTGTAATCGGACAACGTGCGACC 1065177 Query 29631 ATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTT 29690 ||| ||||| || || ||||| | || | | || || || || ||||||||||| || Sbjct 1065178 ATCCTCGAGCTGCTTTCCAGCGAAAATGAGACGCTGTTGGTCAGGGGGAATACCCTCCTT 1065237 Query 29691 GTCTTGTAATTTTTG-TTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTA 29749 ||| || ||| || | ||||| | || | |||||||| || || || || || | Sbjct 1065238 GTCCTG-AATCTTGGCCTTGACGTTATCGATTGTGTCAGACGACTCGACCTCGAGCGTGA 1065296 Query 29750 TAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCATTTTAAAACGTATGCG 29801 | || ||||| || | ||| || ||||||||||||||| | ||||| ||| Sbjct 1065297 TGGTCTTGCCCGTGAGGGTCTTCACAAATATCTGCATTCCACCACGTAGGCG 1065348 Score = 104 bits (114), Expect = 2e-17 Identities = 154/216 (71%), Gaps = 2/216 (1%) Strand=Plus/Plus Query 29572 CGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGAA 29631 || || || | ||| || || || || || ||||||||||| || | || ||| || | Sbjct 1064610 CGTAGTACGAGATGGAGGGTAGACTCCTTCTGAATGTTATAGTCGGAAAGGGTCCGCCCA 1064669 Query 29632 TCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTG 29691 || |||||||| || |||||| | || | | ||||||||| || ||||| || || ||| Sbjct 1064670 TCTTCGAGTTGCTTTCCAGCAAAGATGAGGCGTTGCTGATCAGGAGGAATGCCTTCCTTG 1064729 Query 29692 TCTTGTAATTTTTG-TTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTAT 29750 || || ||| || | |||||| | || | || || || || || || || || || Sbjct 1064730 TCCTG-AATCTTAGCTTTGACGTTGTCGATCGTATCGGACGACTCGACCTCGAGTGTGAT 1064788 Query 29751 AGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 || |||||||| | || || ||||| |||||||| Sbjct 1064789 CGTCTTGCCAGTGAGAGTCTTCACAAAGATCTGCAT 1064824 >seq328 Length=1291088 Score = 82.4 bits (90), Expect = 6e-11 Identities = 135/192 (70%), Gaps = 2/192 (1%) Strand=Plus/Minus Query 29596 TCTTTTTGAATGTTATAATCCGCAATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATAT 29655 || || || ||||| || |||| | || ||| ||| || || || |||||||| | Sbjct 622851 TCCTTCTGGATGTTGTAGTCCGAGAGTGTACGACCATCCTCCAGCTGCTTGCCAGCGAAG 622792 Query 29656 ATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTGTCTTGTAATTTTTG-TTTGACAGT 29714 |||| | ||||| || || ||||||||||| |||||||| ||| || | || || | Sbjct 622791 ATCAGGCGCTGCTGGTCAGGAGGAATACCCTCCTTGTCTTG-AATCTTCGCCTTAACGTT 622733 Query 29715 TTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAAC 29774 || | || ||||| ||| || || ||||| || || ||||| || | || || || Sbjct 622732 GTCGATGGTATCAGATGATTCGACCTCGAGAGTGATCGTCTTGCCCGTAAGAGTCTTGAC 622673 Query 29775 AAATATCTGCAT 29786 || |||||||| Sbjct 622672 GAAGATCTGCAT 622661 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 385217509850760