Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Taiwanofungus_20camphoratus_20[genbank_20GCA_5F000766995.1_202014- 10-15] 360 sequences; 32,155,604 total letters Query= NC_023639.1 Length=1168989 Score E Sequences producing significant alignments: (Bits) Value seq339 161 7e-34 seq224 96.9 3e-14 seq24 96.9 3e-14 >seq339 Length=1233777 Score = 161 bits (178), Expect = 7e-34 Identities = 482/731 (66%), Gaps = 16/731 (2%) Strand=Plus/Minus Query 281380 ATTAGTAATAGTAATATTCTTGGATTTGTTTGTTGATTTATCAGCGGCAGTCACATTAAG 281439 ||| ||||| || || || |||||| || | ||| |||||||| | || || | Sbjct 28204 ATTGGTAATGGTGATGCGGTTCGATTTGCCGGTCGTTTTGTCAGCGGCCGAGACGTTCAA 28145 Query 281440 AATACCATTGGCATCCAAATCAAATGTGACTTCAATTTGAGGGACCCCTCTCTGAGCAGG 281499 |||||||||||| || | |||||| ||||| || ||||| ||||| || | | ||||| Sbjct 28144 AATACCATTGGCGTCAATATCAAAGGTGACCTCGATTTGGGGGACACCACGAGGCGCAGG 28085 Query 281500 TGGGATCCCTTCCAAATTAAATGTTCCCAGATTATTATTATCTTTAGTGAATTTTCGTTC 281559 || || || | | || | ||||| || ||||| || ||| || || Sbjct 28084 GGGAATGCCAGAGAGCTCGAACTTGCCCAGCAAGTTGTTATCCTTCGTGCGCGCACGCTC 28025 Query 281560 ACCCTCGAAAATTTGGAT-AGTAACTACAGTTTGATTATCTGAATAAGTTGTAAATA-CT 281617 ||||||| | | ||||| ||| || | | ||| || || ||||| |||| || | || Sbjct 28024 ACCCTCGTACACCTGGATGAGT-ACACCGGGTTGGTTGTCCGAATATGTTGAGAAGATCT 27966 Query 281618 CTGGATTTTTTACAAGGAATTGTTGTGTTTCTATCAATAATATTGGTCATAATACCACCA 281677 | ||| || || || | || ||||| | | || | |||||| | ||||||| Sbjct 27965 C-GGACTTCTTCGTTGGGACAGTGGTGTTGCGTTTGATGAGGGCGGTCATGACACCACCA 27907 Query 281678 GCTGTTTCTAAACCAAGAGAAAGAGGAGTGACATCAACTAGGACAATATTTTGAAGTTTT 281737 || || || | ||| || ||||| || | |||||| | || | | | ||| || Sbjct 27906 GCAGTCTCAATACCGAGCGAAAGGGGGGCGACATCGAGGAGTAGGAGGTCCTGAGTCTTC 27847 Query 281738 TCATCAGTTTGACCAACAAGAATAGCTGCTTGAATAGCAGCACCATATGCAACAGCTTCA 281797 || || | |||| |||||||| ||||||| |||||||| || |||||||| ||| Sbjct 27846 TCCGAGGTATCACCAGAGAGAATAGCGGCTTGAACGGCAGCACCGTACGCAACAGCCTCA 27787 Query 281798 TCAGGATTAACAGTTTCATTTAGTTTTTTACCATTGAAAAAATTTGA-AAGAAGTTGTC- 281855 |||||||| | | | ||| | | || || ||||| || | || | || ||| | Sbjct 27786 TCAGGATTGATGCTCTTATTAGGCTCCTTGCCGTTGAAGAAGTCAGACACGAGTTTGACG 27727 Query 281856 TTACCTTAGGAATACGAGATGATCCTCCAACTAATACAATTTCATGCACCTGTGATTTAT 281915 ||| ||| ||||| | ||| || ||||| || ||||| |||||||| | || | Sbjct 27726 ATAC--GAGGTATACGCGTTGAACCGCCAACCAAAACAATCTCATGCACGTTACCCTTGT 27669 Query 281916 CCAGTTTTGAATCCAATAAAACTTTTTCAACGGGTTCAAGACCAGCT-CTAAACAAGTCT 281974 | | |||||||| | || || |||||||| || || | ||| | |||||||| Sbjct 27668 CAATCTTTGAATCACGAAGGACCTTCTCAACGGGCTCCAG-CGTGCTGCGGAACAAGTCC 27610 Query 281975 GAACAAAGTTCTTCGAATTTAGCTCTAGTAAG---AGTGACATTATAATCAATTCCTTCG 282031 || ||||| || || ||| | ||||| |||| | |||| || || ||| Sbjct 27609 TGGCACAGTTCCTCAAAACGAGCACGGGTAAGCGAAGTG---TAGAAATCGATACCCTCG 27553 Query 282032 AACAAAGAATCAACTTCAATCGTAGTTTGAGTCGAAGAAGATAGTGCACGTTTAGCACGT 282091 ||||| || || | |||||| | || || | | || || | || || || ||||| Sbjct 27552 AACAACGAGTCGATTTCAATGGACGTCTGTGCAGCGGATGACAATGTGCGCTTGGCACGC 27493 Query 282092 TCACATGCTGT 282102 || || ||||| Sbjct 27492 TCGCAGGCTGT 27482 >seq224 Length=270583 Score = 96.9 bits (106), Expect = 3e-14 Identities = 142/198 (72%), Gaps = 6/198 (3%) Strand=Plus/Plus Query 282265 CAAAAGAGTAACATCATGGGTTCCACCACCCATATCAAAAATAAGTACATTCATTTCTTT 282324 |||||| | ||||| ||||| || |||| || ||||| || |||||| | ||| Sbjct 24770 CAAAAGGGAGACATCGAAAGTTCCTCCTCCCAAGTCGAAAATGAGAACATTCTTCTCTGC 24829 Query 282325 GTCTTGGTTTTTA---TCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAAT 282381 | |||| ||| | || | ||| ||||||| || |||||||| || ||||| || || Sbjct 24830 G-CTTG--TTTGACGGTCCAAACCGTACGCAATGGCCGCAGCAGTGGGCTCATTGATGAT 24886 Query 282382 TCTCAAAACATTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATC 282441 | | ||||| ||||||||| || |||||||||||||| || | | || || || Sbjct 24887 ACGGAGAACATCAAGACCAGCGATCGCACCTGCATCTTTAGTCGCAAGACGCTGAGAGTC 24946 Query 282442 GTTAAAATATGCAGGAAC 282459 ||| || || |||||||| Sbjct 24947 GTTGAAGTAAGCAGGAAC 24964 >seq24 Length=963779 Score = 96.9 bits (106), Expect = 3e-14 Identities = 103/136 (76%), Gaps = 0/136 (0%) Strand=Plus/Plus Query 282338 TCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAATTCTCAAAACATTAAGA 282397 |||||||| ||||||| ||| ||||| || || ||||| || | | ||| || | |||| Sbjct 563839 TCAAGACCGTACGCAAGAGCGGCAGCCGTAGGCTCATTGATCACCCGCAACACGTCAAGA 563898 Query 282398 CCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATCGTTAAAATATGCAGGA 282457 ||||||||| || ||||| || || ||||| | ||| | |||||| || || || || Sbjct 563899 CCAGCAATTTGACCAGCATCCTTCGTCGCTTGCCGTTGCGCATCGTTGAAGTACGCGGGG 563958 Query 282458 ACAGTAATAACGGCAT 282473 ||||| || || |||| Sbjct 563959 ACAGTGATGACAGCAT 563974 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3740612725521360