Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Taiwanofungus_20camphoratus_20[genbank_20GCA_5F000766995.1_202014- 10-15] 360 sequences; 32,155,604 total letters Query= NC_025257.1 Length=102759 Score E Sequences producing significant alignments: (Bits) Value seq328 132 3e-26 >seq328 Length=1291088 Score = 132 bits (146), Expect = 3e-26 Identities = 170/232 (73%), Gaps = 2/232 (1%) Strand=Plus/Minus Query 33519 GTCACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATC 33578 || |||||| | | ||| | ||| | ||| || |||||||| || || ||||||||||| Sbjct 623172 GTTACCACCGCGAAGACGGAGCACGAGATGGAGGGTGCTCTCCTTCTGAATGTTGTAATC 623113 Query 33579 GGAGAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTG 33638 || || ||||| |||| |||| || || ||||| || |||| ||||||||| || | Sbjct 623112 AGAAAGAGTGCGGCCGTCTTCCAGCTGCTTGCCGGCGAAGATCAGACGCTGCTGGTCAGG 623053 Query 33639 CGGCACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATT 33697 || | ||| || ||||| ||| ||| | || |||| ||| | |||||| |||| Sbjct 623052 AGGGATACCCTCCTTGTCTTGAATCTTC-GCTTTGACATTGTCGATGGTGTCAGACGATT 622994 Query 33698 CCACGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCAT 33749 |||| |||| ||||| || || || || ||||| || || || |||||||| Sbjct 622993 CCACCTCAAGGGTGATAGTCTTCCCCGTCAACGTCTTCACGAAAATCTGCAT 622942 Score = 100 bits (110), Expect = 2e-16 Identities = 144/203 (71%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 33547 TGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAGAGTGTGCGTTCGTCGTCCAATTGT 33606 || ||||||||||| || || || ||||| ||||| || ||||| |||| ||||| ||| Sbjct 622306 TGCAGAGTGCTCTCCTTCTGAATATTGTAGTCGGAAAGAGTGCGGCCGTCCTCCAACTGT 622247 Query 33607 TTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGCACACCTTCTTTGTCGGCAATTTTC 33666 || || || || || | |||||||||||| | || | || || ||||| || ||| Sbjct 622246 TTGCCAGCGAAGATAAGACGCTGCTGATCGGGAGGAATGCCCTCCTTGTCTTGGATCTTC 622187 Query 33667 TGTTTCAACATAGTCACGGTGTCGCTTGATTCCACGTCAACCGTGATCGTTTTACCTGTT 33726 |||| || | |||||| || ||||| || | |||||| || || || || Sbjct 622186 GCCTTCACGTTATCGATGGTGTCAGAAGACTCCACCTCGAGCGTGATAGTCTTGCCCGTA 622127 Query 33727 AACGTTTTTACAAAGATCTGCAT 33749 | || || || ||||||||||| Sbjct 622126 AGGGTCTTGACGAAGATCTGCAT 622104 Score = 93.3 bits (102), Expect = 3e-14 Identities = 145/205 (71%), Gaps = 2/205 (1%) Strand=Plus/Minus Query 33547 TGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAGAGTGTGCGTTCGTCGTCCAATTGT 33606 || || || ||||| || || |||||||| || |||||||| || | || |||| || Sbjct 622863 TGAAGGGTACTCTCCTTCTGGATGTTGTAGTCCGAGAGTGTACGACCATCCTCCAGCTGC 622804 Query 33607 TTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGCACACCTTCTTTGTCGGCAATTTTC 33666 || || || || |||| |||||||| || | || | ||| || ||||| ||| ||| Sbjct 622803 TTGCCAGCGAAGATCAGGCGCTGCTGGTCAGGAGGAATACCCTCCTTGTCTTGAATCTTC 622744 Query 33667 TGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCACGTCAACCGTGATCGTTTTACCTGT 33725 || ||| | ||| | ||| || |||||| || || | |||||||| || || || Sbjct 622743 GCCTT-AACGTTGTCGATGGTATCAGATGATTCGACCTCGAGAGTGATCGTCTTGCCCGT 622685 Query 33726 TAACGTTTTTACAAAGATCTGCATA 33750 | || || || |||||||||||| Sbjct 622684 AAGAGTCTTGACGAAGATCTGCATA 622660 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 328702557811200