Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Taiwanofungus_20camphoratus_20[genbank_20GCA_5F000766995.1_202014- 10-15] 360 sequences; 32,155,604 total letters Query= NC_025412.1 Length=369360 Score E Sequences producing significant alignments: (Bits) Value seq223 96.9 8e-15 seq328 95.1 3e-14 >seq223 Length=1670925 Score = 96.9 bits (106), Expect = 8e-15 Identities = 145/206 (70%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 206185 AAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCA 206244 || ||||| || || || || ||||| ||||| || || || ||||| |||| Sbjct 1064581 AAGACGCTTACCGGCAAGACCATCACGTTGGAGGTCGAGTCATCAGACACGATCGATAAC 1064522 Query 206245 GTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTC 206304 || ||| ||||||||| || || ||||| ||| ||| ||| || | | |||||| Sbjct 1064521 GTGAAGGCAAAGATTCAGGATAAGGAAGGCATTCCGCCAGACCAACAGCGCTTGATCTTC 1064462 Query 206305 GCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCT 206364 || || |||||| | || || || || || | | |||||||| | ||||| ||||| Sbjct 1064461 GCTGGCAAGCAGCTCGAGGACGGTAGAACGCTCTCGGATTACAATATTCAGAAGGAGTCG 1064402 Query 206365 ACTCTTCACCTTGTTTTGAGACTTCG 206390 ||||||||||| ||| | | ||||| Sbjct 1064401 ACTCTTCACCTCGTTCTTCGTCTTCG 1064376 Score = 93.3 bits (102), Expect = 1e-13 Identities = 144/206 (70%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232 ||||||||| || || ||||| || || || ||||| | || || || |||||| Sbjct 1065330 CAGATATTTGTGAAGACCCTCACGGGCAAGACCATCACGCTCGAGGTCGAGTCGTCTGAC 1065271 Query 206233 ACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAA 206292 ||| |||| || ||| |||||||| || || || || ||| || ||| || Sbjct 1065270 ACAATCGATAACGTCAAGGCCAAGATTCAGGACAAGGAGGGTATTCCCCCTGACCAACAG 1065211 Query 206293 AGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTC 206352 | || || ||||| ||||||||| | || ||||| | || ||| ||||||||||| | Sbjct 1065210 CGTCTCATTTTCGCTGGAAAGCAGCTCGAGGATGGTCGCACGTTGTCCGATTACAACATT 1065151 Query 206353 CAGAAAGAGTCTACTCTTCACCTTGT 206378 ||||| || || ||| | || || || Sbjct 1065150 CAGAAGGAATCCACTTTACATCTGGT 1065125 Score = 84.2 bits (92), Expect = 5e-11 Identities = 139/201 (69%), Gaps = 0/201 (0%) Strand=Plus/Minus Query 206185 AAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCA 206244 ||||| || || || || || ||||| ||||||||||| || ||||| |||| Sbjct 1064353 AAAACACTTACGGGCAAGACTATCACATTGGAAGTGGAGTCATCAGACACGATCGACAAT 1064294 Query 206245 GTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTC 206304 || ||| |||||||| || || || || || || ||| ||| | | |||||| Sbjct 1064293 GTGAAGGCGAAGATTCAGGATAAGGAGGGTATCCCTCCTGACCAGCAACGCTTGATCTTC 1064234 Query 206305 GCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCT 206364 || || || |||||||| ||||| || || | | ||||| || | ||||| ||| Sbjct 1064233 GCGGGGAAACAGTTGGAGGATGGCAGAACGCTCTCGGATTATAATATTCAGAAGGAGAGC 1064174 Query 206365 ACTCTTCACCTTGTTTTGAGA 206385 || |||||||| | |||| || Sbjct 1064173 ACCCTTCACCTCGGTTTGTGA 1064153 >seq328 Length=1291088 Score = 95.1 bits (104), Expect = 3e-14 Identities = 144/205 (70%), Gaps = 0/205 (0%) Strand=Plus/Plus Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232 ||||| || ||| || || || || || ||||||||| | || || ||| ||||| Sbjct 622664 CAGATCTTCGTCAAGACTCTTACGGGCAAGACGATCACTCTCGAGGTCGAATCATCTGAT 622723 Query 206233 ACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAA 206292 || |||| || ||| ||||||||||| || || || ||| || ||| || Sbjct 622724 ACCATCGACAACGTTAAGGCGAAGATTCAAGACAAGGAGGGTATTCCTCCTGACCAGCAG 622783 Query 206293 AGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTC 206352 | || |||||||| || |||||| |||| ||||| | || | | || |||||| || Sbjct 622784 CGCCTGATCTTCGCTGGCAAGCAGCTGGAGGATGGTCGTACACTCTCGGACTACAACATC 622843 Query 206353 CAGAAAGAGTCTACTCTTCACCTTG 206377 ||||| ||| ||| |||||||||| Sbjct 622844 CAGAAGGAGAGTACCCTTCACCTTG 622868 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1181815348851560