Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Taiwanofungus_20camphoratus_20[genbank_20GCA_5F000766995.1_202014- 10-15] 360 sequences; 32,155,604 total letters Query= NC_027213.1 Length=214699 Score E Sequences producing significant alignments: (Bits) Value seq1 109 8e-19 >seq1 Length=2218769 Score = 109 bits (120), Expect = 8e-19 Identities = 358/554 (65%), Gaps = 12/554 (2%) Strand=Plus/Minus Query 39614 AAGCAGGCGAAGTCACAATGTAGGCCCTCATCTCTACTAATTAATTCGTTAGAAAATGTG 39673 ||||| || ||||| ||| | ||||| || | || || | || || || || ||| Sbjct 2184300 AAGCATGCAAAGTCGGTATGCATACCCTCGTCACGGCTGATAAGCTCATTTGAGAACGTG 2184241 Query 39674 AGTCCAGGCATTAGACCACGCTTTTTGAGCCAAAATATGGCAGCAAAAGATCCAGAAAAG 39733 || |||||||| | || | ||| || ||||| || || | ||||||||||| |||||| Sbjct 2184240 AGACCAGGCATCAAGCCTCTCTTCTTCAGCCAGAAAATCGAGGCAAAAGATCCTGAAAAG 2184181 Query 39734 AAGATGCCTTCTACTGCTGCAAATGCAACAAGTCTCTCTCCGTAACTTGTATCATTATG- 39792 ||||| || || || || || || ||||| || | ||| || ||| | | || || Sbjct 2184180 AAGATACCCTCAACAGCAGCGAAGGCAACGAGCCGCTCAGCG-AAC--GCAGATTTCTGG 2184124 Query 39793 -----TATCCACTTCTGTGCCCAATCAGCTTTCTTCTTTACACAAGGCATTGTTTCTATA 39847 |||||| | | ||||| ||||| |||||||| | || || || || || ||| Sbjct 2184123 TCCGAGATCCACCGCAGCGCCCAGTCAGCCTTCTTCTTGATGCATGGAATAGTGTCAATA 2184064 Query 39848 GCATTAAAGAGATAATGTTTTTCATCACTATCTTTAACATATGTATCTATTAACAGACTA 39907 |||| || || | | | || || || | || || || || | ||| Sbjct 2184063 GCATCGAAAAGGTGCTCCCGCTGCGCAGGGTCCTTGATGTAAGTGTCGATAAGAAGAGAG 2184004 Query 39908 TACATTTCTGAATGGATGTTTTCAATCGCCATCTGAAATCCGTAAAAACATCTTGCTTCA 39967 || | || || || ||||| || ||| || || || ||||| || || | || || Sbjct 2184003 TATGTCTCAGAGTGAATGTTCTCCATCATGATTTGGAAACCGTAGAAGCAGCGGGCCTCG 2183944 Query 39968 GTAATTTGTACCTCTGAACAAAATCTTTCCGCCAAATTTTCATTCACTATTCCATCACTA 40027 | || || || || | |||| || | | || ||||| || || ||||| Sbjct 2183943 GCAACCTGCACTTCATTCGAGAATCGCTCAACAAGGTTCTCATTGACGATGCCATCCGAC 2183884 Query 40028 GCGGCAAAAAATGCCAATACATGTTTAATAAAATATTTTTCATCGGGTGTCAAT---TTA 40084 || ||||| || || | || || ||||| | ||| || ||| | || Sbjct 2183883 GCAGCAAAGAAAGCAAGAACGTGAGATATAAAGTGACGTTCGCCGTCGTTCATTCGGTTG 2183824 Query 40085 TTCCAGTCATTGATATCTTTTGATATATCTACTTCTTCAGCTGTCCAAAACGACGCCTCT 40144 |||||||||| || || || || | ||| || || || |||||| || || ||||| Sbjct 2183823 TTCCAGTCATGGAGGTCCTTCGAGAGATCAACCTCCTCCATTGTCCAGAAGGAGGCCTCA 2183764 Query 40145 GCCTTTTTGTACAT 40158 |||||||||||||| Sbjct 2183763 GCCTTTTTGTACAT 2183750 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 686905708910400