Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Taiwanofungus_20camphoratus_20[genbank_20GCA_5F000766995.1_202014- 10-15] 360 sequences; 32,155,604 total letters Query= NC_027778.1 Length=124244 Score E Sequences producing significant alignments: (Bits) Value seq306 159 3e-34 seq1 140 3e-28 >seq306 Length=1616116 Score = 159 bits (176), Expect = 3e-34 Identities = 306/445 (69%), Gaps = 17/445 (4%) Strand=Plus/Minus Query 43850 GTTTTGGCGTTTTTTGCTGCGAGCGACGGGATAGTCAATGAAAATTTGGTTAGTCGGTTT 43909 ||| | ||||| ||||||||| || || || ||||| || ||| | ||| ||||| Sbjct 904584 GTTCTCGCGTTCTTTGCTGCGTCGGATGGCATTGTCAACGAGAATCTCGTTGAGCGGTTC 904525 Query 43910 GCGCAAGAAGTTCAATTACCAGAAGCACGATGTTTTTATGGGTTTCAAATTGCCATAGAA 43969 | | || || || ||||||| ||||| || ||||| || || || || || Sbjct 904524 TCCAATGAGGTACAGGCTGCAGAAGCGCGATGCTTCTATGGCTTCCAGATCATGATGGAG 904465 Query 43970 AATATTCATTCGGAAATGTACAGTCTTCTGATAGATACGTACATCAAAGA---TGGGCA- 44025 || ||||| || || | ||| ||||| || ||||| |||||||| || | ||| Sbjct 904464 AACATTCACTCCGAGACATACTCCCTTCTCATCGATACTTACATCAAGGACCCTCAGCAG 904405 Query 44026 CGAGAAGCATCGATTGTTTAATGCGATAGAAACAGTACCTGCGATTAAACATAAAGCAGA 44085 |||||| |||| | ||| | || || || || | ||| || || | || || || Sbjct 904404 CGAGAA-CATC---TCTTTGACGCCATTGACACCATCCCTTGTATCAAGAAGAAGGCTGA 904349 Query 44086 CTGGGCCCTTAAATGGATAAATTCAAATGAT---TCT---TTTGGAGAACGACTTGTCGC 44139 |||||| | ||||| ||| || | ||| |||| || ||||| || || Sbjct 904348 CTGGGCATTGCGGTGGAT---TTCGGATAAGAAGTCTACATTTGCTGAGCGACTCGTTGC 904292 Query 44140 GTTTGCAGTTGTGGAAGGCATTTTCTTTTCAGGATCGTTTGCGGCCATATTTTGGTTAAA 44199 ||||| | || || ||||||||||| || || || |||||| |||| || ||| | || Sbjct 904291 CTTTGCTGCAGTAGAGGGCATTTTCTTCTCTGGGTCCTTTGCGTCCATTTTCTGGCTCAA 904232 Query 44200 GAAACGAGGTTTGATGCCTGGGTTGACGTTTTCAAATGAGTTAATAAGTCGTGATGAAGG 44259 ||| || || |||||||||| ||||||| || |||||| | |||||||||||||| || Sbjct 904231 GAAGCGTGGCCTGATGCCTGGTCTGACGTTCTCGAATGAGCTGATAAGTCGTGATGAGGG 904172 Query 44260 CTTACATTGCGATTTTGCTTGCTTG 44284 | | || ||| ||||| || ||| Sbjct 904171 CATGCACACCGACTTTGCGTGTTTG 904147 >seq1 Length=2218769 Score = 140 bits (154), Expect = 3e-28 Identities = 309/458 (67%), Gaps = 13/458 (3%) Strand=Plus/Plus Query 43835 CATTTTATATCTTTGGTTTTGGCGTTTTTTGCTGCGAGCGACGGGATAGTCAATGAAAAT 43894 || ||||||||| ||| | || || ||||||||| || || || |||||||| || Sbjct 2183849 CACTTTATATCTCACGTTCTTGCTTTCTTTGCTGCGTCGGATGGCATCGTCAATGAGAAC 2183908 Query 43895 TTGGTTAGTCGGTTTGCGCAAGAAGTTCAATTACCAGAAGCACGATGTTTTTATGGGTTT 43954 | ||| || || || | ||||| || | | || || || || || || || || Sbjct 2183909 CTTGTTGAGCGATTCTCGAATGAAGTGCAGGTTGCCGAGGCCCGCTGCTTCTACGGTTTC 2183968 Query 43955 CAAATTGCCATAGAAAATATTCATTCGGAAATGTACAGTCTTCTGATAGATACGTACATC 44014 ||||| || || || ||||| || || | ||| |||||| || || || |||||| Sbjct 2183969 CAAATCATGATGGAGAACATTCACTCTGAGACATACTCTCTTCTTATCGACACTTACATC 2184028 Query 44015 AAAGA---TGGGCACGAGAAGCATCGATTGTTTAATGCGATAGAAACAGTACC-TGCGAT 44070 || || || ||| | |||| | | || |||| || || || | || ||| || Sbjct 2184029 AAGGACCCTGCGCAGCGGGAGCACC---TTTTCGATGCTATTGACACTATTCCATGC-AT 2184084 Query 44071 TAAACATAAAGCAGACTGGGCCCTTAAATGGATA----AATTCAAATGATTCTTTTGGAG 44126 || | || || |||||||| || ||||| | |||| | | || | | Sbjct 2184085 CAAGAAGAAGGCTGACTGGGCGCTGCGGTGGATCTCGGACCAGAAATC-TGCGTTCGCTG 2184143 Query 44127 AACGACTTGTCGCGTTTGCAGTTGTGGAAGGCATTTTCTTTTCAGGATCGTTTGCGGCCA 44186 | || || || || || || | ||| || || || |||||||||||||| ||||| | | Sbjct 2184144 AGCGGCTCGTTGCCTTCGCTGCTGTTGAGGGTATCTTCTTTTCAGGATCTTTTGCCTCGA 2184203 Query 44187 TATTTTGGTTAAAGAAACGAGGTTTGATGCCTGGGTTGACGTTTTCAAATGAGTTAATAA 44246 | || ||| | ||||| |||| ||||||||||| | ||||| ||||||||| | || | Sbjct 2184204 TTTTCTGGCTGAAGAAGAGAGGCTTGATGCCTGGTCTCACGTTCTCAAATGAGCTTATCA 2184263 Query 44247 GTCGTGATGAAGGCTTACATTGCGATTTTGCTTGCTTG 44284 | ||||| || || | ||| ||| ||||| |||||| Sbjct 2184264 GCCGTGACGAGGGTATGCATACCGACTTTGCATGCTTG 2184301 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397454256161800