Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Taiwanofungus_20camphoratus_20[genbank_20GCA_5F000766995.1_202014- 10-15] 360 sequences; 32,155,604 total letters Query= NC_027923.1 Length=132831 Score E Sequences producing significant alignments: (Bits) Value seq223 107 2e-18 seq328 87.8 2e-12 >seq223 Length=1670925 Score = 107 bits (118), Expect = 2e-18 Identities = 160/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 27021 CCTCCGCGCAACCGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTC 27080 || ||||| | || | |||| |||||| || || || || ||||| ||||| ||| | Sbjct 1065107 CCACCGCGGAGACGAAGGACCAGATGTAAAGTGGATTCCTTCTGAATGTTGTAATCGGAC 1065166 Query 27081 ATGTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGC 27140 | |||| | || |||||||| || || ||| |||||||||||||||| || || || Sbjct 1065167 AACGTGCGACCATCCTCGAGCTGCTTTCCAGCGAAAATGAGACGCTGTTGGTCAGGGGGA 1065226 Query 27141 ACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACT 27200 | |||||| || || |||||| || | | | || | ||||| | | || || Sbjct 1065227 ATACCCTCCTTGTCCTGAATCTTGGCCTTGACGTTATCGATTGTGTCAGACGACTCGACC 1065286 Query 27201 TCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACAAAGATTTGCAT 27247 || || || || | |||||||| || || |||||||| || ||||| Sbjct 1065287 TCGAGCGTGATGGTCTTGCCCGTGAGGGTCTTCACAAATATCTGCAT 1065333 Score = 84.2 bits (92), Expect = 2e-11 Identities = 147/213 (69%), Gaps = 1/213 (0%) Strand=Plus/Plus Query 27037 ATACCAAA-TGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCGTCT 27095 ||||||| || | ||||| || || ||||||||||| || || | || | || Sbjct 1064894 ATACCAAGGTGAAGGGTAGATTCCTTCTGAATATTGTAATCAGACAGCGTCCGGCCATCC 1064953 Query 27096 TCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCG 27155 || || || || || || | || ||||| || ||||| || || | |||||| || || Sbjct 1064954 TCAAGTTGCTTTCCAGCAAAGATCAGACGTTGCTGATCTGGAGGGATACCCTCCTTGTCC 1065013 Query 27156 GCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGAT 27215 ||||| ||||| | | || | |||||| | | ||||| || || || || | Sbjct 1065014 TGAATCTTTGCTTTCACGTTATCGATAGTGTCCGACGACTCAACCTCAAGTGTAATCGTC 1065073 Query 27216 TTGCCCGTCAGAGTTTTCACAAAGATTTGCATA 27248 ||||| || ||||| |||||||| || |||||| Sbjct 1065074 TTGCCAGTGAGAGTCTTCACAAAAATCTGCATA 1065106 Score = 82.4 bits (90), Expect = 6e-11 Identities = 155/228 (68%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 27021 CCTCCGCGCAACCGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTC 27080 || || |||| ||| | ||| | ||| | ||||| || || ||||| || |||||| Sbjct 1064598 CCGCCACGCAGCCGTAGTACGAGATGGAGGGTAGACTCCTTCTGAATGTTATAGTCGGAA 1064657 Query 27081 ATGTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGC 27140 | | | ||| | |||||||| || || || || | ||||| || || ||||| || || Sbjct 1064658 AGGGTCCGCCCATCTTCGAGTTGCTTTCCAGCAAAGATGAGGCGTTGCTGATCAGGAGGA 1064717 Query 27141 ACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACT 27200 | || || || || ||||| ||| | | | || | || || | | || || Sbjct 1064718 ATGCCTTCCTTGTCCTGAATCTTAGCTTTGACGTTGTCGATCGTATCGGACGACTCGACC 1064777 Query 27201 TCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACAAAGATTTGCATA 27248 || || || || | ||||| || ||||| ||||||||||| |||||| Sbjct 1064778 TCGAGTGTGATCGTCTTGCCAGTGAGAGTCTTCACAAAGATCTGCATA 1064825 >seq328 Length=1291088 Score = 87.8 bits (96), Expect = 2e-12 Identities = 134/191 (70%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 27057 TCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAA 27116 || || ||||||||||||||| | |||| |||| || | |||||| || ||| | Sbjct 622294 TCCTTCTGAATATTGTAGTCGGAAAGAGTGCGGCCGTCCTCCAACTGTTTGCCAGCGAAG 622235 Query 27117 ATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTT 27176 || |||||||| ||||| || || | ||||| || || |||||| |||| | | Sbjct 622234 ATAAGACGCTGCTGATCGGGAGGAATGCCCTCCTTGTCTTGGATCTTCGCCTTCACGTTA 622175 Query 27177 TCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACA 27236 || | ||||| | | || || || || || |||| |||||||| || || || || Sbjct 622174 TCGATGGTGTCAGAAGACTCCACCTCGAGCGTGATAGTCTTGCCCGTAAGGGTCTTGACG 622115 Query 27237 AAGATTTGCAT 27247 ||||| ||||| Sbjct 622114 AAGATCTGCAT 622104 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 424932535600320