Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Taiwanofungus_20camphoratus_20[genbank_20GCA_5F000766995.1_202014- 10-15] 360 sequences; 32,155,604 total letters Query= NC_028091.1 Length=196300 Score E Sequences producing significant alignments: (Bits) Value seq1 100 4e-16 >seq1 Length=2218769 Score = 100 bits (110), Expect = 4e-16 Identities = 200/291 (69%), Gaps = 4/291 (1%) Strand=Plus/Plus Query 122677 CCCTCATCTCGGGAAATAAGTTCATTTGAGAAGCATAGACCTGGCATGAGACCCCGCTTC 122736 ||||| || ||| ||| || ||||| ||||| || || ||||||||||||| ||| Sbjct 2182070 CCCTCGTCGCGGATAATCAGCTCATTGGAGAACGTCAGGCCAGGCATGAGACCCCTTTTC 2182129 Query 122737 TTCAACCAATAAATAG-CGCAGAATGACCCGGAGAAGAAGATACCCTCCACACACGCAAA 122795 || | ||| | || | ||| || || ||||||||||| || || || ||| ||| || Sbjct 2182130 TTGAGCCAGAATATGGATGCA-AAGGAGCCGGAGAAGAATATGCCTTCGACAGCCGCGAA 2182188 Query 122796 CGCAAAAAGGCGTTCGGCGAAGGAGCGAGACTTTG-CATCAAACCATTTCATTGCCCATT 122854 || | ||| || || ||||| | | || | ||| || || |||| || |||||| | Sbjct 2182189 AGCGACAAGCCGCTCCGCGAACGTG-GATTCCTTGTCAGAAATCCATCGCAGTGCCCAGT 2182247 Query 122855 TCGCCTTCTTCTCAATACATGGTACAGTTTGGATGGCTTCAAATAACTGCTTCTTTTCAG 122914 ||||| || | ||||||||| | || | ||| || || || || || | | || Sbjct 2182248 CAGCCTTTTTTTTAATACATGGGATGGTCTCGATCGCATCGAACAAATGGTCCCGTTGTT 2182307 Query 122915 ATCCATCCTTAATGTATTTGTCAATCAATTTTGAATATGTTTCGCCATGAA 122965 | ||||| |||||| ||||||| | || ||||| ||| ||||| Sbjct 2182308 GTTGGTCCTTGATGTATGTGTCAATGAGCAGAGAGTATGTCTCGGAATGAA 2182358 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 628029173856000