Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Taiwanofungus_20camphoratus_20[genbank_20GCA_5F000766995.1_202014- 10-15] 360 sequences; 32,155,604 total letters Query= NC_028491.1 Length=98392 Score E Sequences producing significant alignments: (Bits) Value seq328 132 3e-26 seq223 98.7 6e-16 >seq328 Length=1291088 Score = 132 bits (146), Expect = 3e-26 Identities = 170/229 (74%), Gaps = 4/229 (2%) Strand=Plus/Minus Query 34480 CCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAA 34539 || || | |||||| | ||| | |||||| ||||||||||| |||||||| ||||| ||| Sbjct 623168 CCACCGCGAAGACGGAGCACGAGATGGAGGGTGCTCTCCTTCTGAATGTTGTAATCAGAA 623109 Query 34540 AGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGC 34599 || || || ||||||| || || || ||||| || || | |||||| ||||| || || Sbjct 623108 AGAGTGCGGCCGTCTTCCAGCTGCTTGCCGGCGAAGATCAGACGCTGCTGGTCAGGAGGG 623049 Query 34600 ACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGAT-AAAATTGTGTC-TTCGCTCTCCA 34657 | |||||||||||| ||| || | ||| || | || ||||| || | |||| Sbjct 623048 ATACCCTCCTTGTCT-TGAATCTTCGCTTTGACATTGTCGATGGTGTCAGACGAT-TCCA 622991 Query 34658 CTTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706 | || | ||| || || || || || ||||| ||||| ||||||||||| Sbjct 622990 CCTCAAGGGTGATAGTCTTCCCCGTCAACGTCTTCACGAAAATCTGCAT 622942 Score = 91.5 bits (100), Expect = 9e-14 Identities = 152/213 (71%), Gaps = 5/213 (2%) Strand=Plus/Minus Query 34498 ACCAA-ATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGCTCGTCTTC 34556 ||||| |||||| ||||||||||| ||||| || || || || || || || |||| || Sbjct 622591 ACCAAGATGGAGTGTGCTCTCCTTCTGAATATTGTAGTCAGAGAGAGTACGGCCGTCCTC 622532 Query 34557 AAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCCTTGT-CTG 34615 || || || ||||| || || ||||| ||||| || ||||| | || ||||||| ||| Sbjct 622531 CAGCTGCTTGCCGGCGAAGATCAAACGTTGTTGATCAGGCGGGATGCCTTCCTTGTCCTG 622472 Query 34616 TGATCTTTTGTTTTAACGAT-AAAATTGTGTCTTCGCTCTCCACTTCCACGGTTATCGTT 34674 | ||| || | || || | || || || |||||| || | ||| || || Sbjct 622471 T-ATC-TTGGCCTTGACATTGTCGATGGTATCAGAAGACTCCACCTCAAGGGTGATAGTC 622414 Query 34675 TTACCGGTTAACGTTTTCACAAAAATCTGCATG 34707 || || || || || || || |||||||||||| Sbjct 622413 TTTCCAGTCAATGTCTTGACGAAAATCTGCATG 622381 Score = 86.0 bits (94), Expect = 4e-12 Identities = 143/204 (70%), Gaps = 2/204 (1%) Strand=Plus/Minus Query 34504 TGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGCTCGTCTTCAAGTTGT 34563 || |||||||||||||| ||||| || || || ||||| || || |||| || | ||| Sbjct 622306 TGCAGAGTGCTCTCCTTCTGAATATTGTAGTCGGAAAGAGTGCGGCCGTCCTCCAACTGT 622247 Query 34564 TTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCCTTGTCTGTGATCTTT 34623 || || || || || | |||||| || || || || | |||||||||||| |||| || Sbjct 622246 TTGCCAGCGAAGATAAGACGCTGCTGATCGGGAGGAATGCCCTCCTTGTCTTGGATC-TT 622188 Query 34624 TGTTTTAACGATA-AAATTGTGTCTTCGCTCTCCACTTCCACGGTTATCGTTTTACCGGT 34682 | || ||| || || ||||| |||||| || | || || || || || || Sbjct 622187 CGCCTTCACGTTATCGATGGTGTCAGAAGACTCCACCTCGAGCGTGATAGTCTTGCCCGT 622128 Query 34683 TAACGTTTTCACAAAAATCTGCAT 34706 | || || || || |||||||| Sbjct 622127 AAGGGTCTTGACGAAGATCTGCAT 622104 >seq223 Length=1670925 Score = 98.7 bits (108), Expect = 6e-16 Identities = 160/228 (70%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 34480 CCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAA 34539 || || | |||||| | || | || ||||| |||||| ||||| || ||||| || Sbjct 1064370 CCTCCGCGAAGACGAAGAACGAGGTGAAGAGTCGACTCCTTCTGAATATTGTAATCCGAG 1064429 Query 34540 AGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGC 34599 || |||| |||| || || || || || || || || || ||||||||||| ||||| Sbjct 1064430 AGCGTTCTACCGTCCTCGAGCTGCTTGCCAGCGAAGATCAAGCGCTGTTGGTCTGGCGGA 1064489 Query 34600 ACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGATA-AAATTGTGTCTTCGCTCTCCAC 34658 | || ||||| || ||| |||| || ||| || || |||||| ||| || Sbjct 1064490 ATGCCTTCCTTATC-CTGAATCTTTGCCTTCACGTTATCGATCGTGTCTGATGACTCGAC 1064548 Query 34659 TTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706 |||| || || || || ||||| | ||| ||||||||||| ||||| Sbjct 1064549 CTCCAACGTGATGGTCTTGCCGGTAAGCGTCTTCACAAAAATTTGCAT 1064596 Score = 87.8 bits (96), Expect = 1e-12 Identities = 136/192 (71%), Gaps = 2/192 (1%) Strand=Plus/Plus Query 34516 TCCTTTTGAATGTTATAATCTGAAAGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAAT 34575 ||||| ||||| || ||||| || || || || | || |||||||| || || ||||| Sbjct 1064915 TCCTTCTGAATATTGTAATCAGACAGCGTCCGGCCATCCTCAAGTTGCTTTCCAGCAAAG 1064974 Query 34576 ATTAAACGCTGTTGGTCCGGCGGCACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGAT 34635 || | ||| || || || || || | ||||||||||| ||| |||| ||| ||| | Sbjct 1064975 ATCAGACGTTGCTGATCTGGAGGGATACCCTCCTTGTC-CTGAATCTTTGCTTTCACGTT 1065033 Query 34636 A-AAATTGTGTCTTCGCTCTCCACTTCCACGGTTATCGTTTTACCGGTTAACGTTTTCAC 34694 | || ||||| ||| || || | || ||||| || || || | || ||||| Sbjct 1065034 ATCGATAGTGTCCGACGACTCAACCTCAAGTGTAATCGTCTTGCCAGTGAGAGTCTTCAC 1065093 Query 34695 AAAAATCTGCAT 34706 |||||||||||| Sbjct 1065094 AAAAATCTGCAT 1065105 Score = 86.0 bits (94), Expect = 4e-12 Identities = 143/204 (70%), Gaps = 2/204 (1%) Strand=Plus/Plus Query 34504 TGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGCTCGTCTTCAAGTTGT 34563 || || ||||||||||| ||||| |||||||| || || |||| | || || | ||| Sbjct 1064166 TGAAGGGTGCTCTCCTTCTGAATATTATAATCCGAGAGCGTTCTGCCATCCTCCAACTGT 1064225 Query 34564 TTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCCTTGTCTGTGATCTTT 34623 || || || || || || || || ||||| || || | |||||||| || ||| || Sbjct 1064226 TTCCCCGCGAAGATCAAGCGTTGCTGGTCAGGAGGGATACCCTCCTTATC-CTGAATCTT 1064284 Query 34624 TGTTTTAACGAT-AAAATTGTGTCTTCGCTCTCCACTTCCACGGTTATCGTTTTACCGGT 34682 | || || | || |||||| ||||||||||| || || || || || || Sbjct 1064285 CGCCTTCACATTGTCGATCGTGTCTGATGACTCCACTTCCAATGTGATAGTCTTGCCCGT 1064344 Query 34683 TAACGTTTTCACAAAAATCTGCAT 34706 | |||||||||||||| ||||| Sbjct 1064345 AAGTGTTTTCACAAAAATTTGCAT 1064368 Score = 82.4 bits (90), Expect = 5e-11 Identities = 151/219 (69%), Gaps = 2/219 (1%) Strand=Plus/Plus Query 34489 AGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGC 34548 ||||| | |||| ||| | |||| ||||| |||||||| ||||| || | || || Sbjct 1065116 AGACGAAGGACCAGATGTAAAGTGGATTCCTTCTGAATGTTGTAATCGGACAACGTGCGA 1065175 Query 34549 TCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCC 34608 | || || || || || || || || || | |||||||||||| || || | |||||| Sbjct 1065176 CCATCCTCGAGCTGCTTTCCAGCGAAAATGAGACGCTGTTGGTCAGGGGGAATACCCTCC 1065235 Query 34609 TTGTCTGTGATCTTTTGTTTTAACGATA-AAATTGTGTCTTCGCTCTCCACTTCCACGGT 34667 ||||| ||| || | || ||| || |||||||| ||| || || | || Sbjct 1065236 TTGTC-CTGAATCTTGGCCTTGACGTTATCGATTGTGTCAGACGACTCGACCTCGAGCGT 1065294 Query 34668 TATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706 || || || || || | || |||||||| |||||||| Sbjct 1065295 GATGGTCTTGCCCGTGAGGGTCTTCACAAATATCTGCAT 1065333 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 314728219123880