Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Taiwanofungus_20camphoratus_20[genbank_20GCA_5F000766995.1_202014- 10-15] 360 sequences; 32,155,604 total letters Query= NC_028636.1 Length=135952 Score E Sequences producing significant alignments: (Bits) Value seq328 134 1e-26 seq223 125 6e-24 >seq328 Length=1291088 Score = 134 bits (148), Expect = 1e-26 Identities = 166/227 (73%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 |||||||| || || || || |||| || ||| |||| || ||||| |||||| |||| Sbjct 622942 ATGCAGATTTTCGTGAAGACGTTGACGGGGAAGACTATCACCCTTGAGGTGGAATCGTCT 623001 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| | || || | |||||| || ||||||||||| || || || || || || || Sbjct 623002 GACACCATCGACAATGTCAAAGCGAAGATTCAAGACAAGGAGGGTATCCCTCCTGACCAG 623061 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 |||||| | || | ||||||||| || |||||||| | || |||| ||||||||| Sbjct 623062 CAGCGTCTGATCTTCGCCGGCAAGCAGCTGGAAGACGGCCGCACTCTTTCTGATTACAAC 623121 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGG 27214 ||||| |||||| ||| | ||| | || | ||| | || ||||| Sbjct 623122 ATTCAGAAGGAGAGCACCCTCCATCTCGTGCTCCGTCTTCGCGGTGG 623168 Score = 86.0 bits (94), Expect = 5e-12 Identities = 134/192 (70%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 |||||||| || || || ||||| || |||||| | || ||||| || || ||| | || Sbjct 622661 ATGCAGATCTTCGTCAAGACTCTTACGGGCAAGACGATCACTCTCGAGGTCGAATCATCT 622720 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 || | || || | || || || ||||||||||| || || || || || || || Sbjct 622721 GATACCATCGACAACGTTAAGGCGAAGATTCAAGACAAGGAGGGTATTCCTCCTGACCAG 622780 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 ||||| | || | ||| ||||| || |||| || || || | || || |||||| Sbjct 622781 CAGCGCCTGATCTTCGCTGGCAAGCAGCTGGAGGATGGTCGTACACTCTCGGACTACAAC 622840 Query 27168 ATTCAAAAGGAG 27179 || || |||||| Sbjct 622841 ATCCAGAAGGAG 622852 >seq223 Length=1670925 Score = 125 bits (138), Expect = 6e-24 Identities = 168/231 (73%), Gaps = 2/231 (1%) Strand=Plus/Minus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 |||||||||||||| || || || || |||||| | || || || || || || |||| Sbjct 1065333 ATGCAGATATTTGTGAAGACCCTCACGGGCAAGACCATCACGCTCGAGGTCGAGTCGTCT 1065274 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| | || || | ||||| || ||||| ||||| || || || || || || ||| Sbjct 1065273 GACACAATCGATAACGTCAAGGCCAAGATTCAGGACAAGGAGGGTATTCCCCCTGACCAA 1065214 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTT-TCCGATTACAA 27166 |||||| | || | ||| || || || | || || || || |||| ||||||||||| Sbjct 1065213 CAGCGTCTCATTTTCGCTGGAAAGCAGCTCGAGGATGGT-CGCACGTTGTCCGATTACAA 1065155 Query 27167 CATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 |||||| ||||| || || |||||| |||| | ||| | || ||||| || Sbjct 1065154 CATTCAGAAGGAATCCACTTTACATCTGGTCCTTCGTCTCCGCGGTGGTAT 1065104 Score = 109 bits (120), Expect = 5e-19 Identities = 162/230 (70%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 ||||| || ||||| || || || ||||||||| | || || | || || || | || Sbjct 1064596 ATGCAAATTTTTGTGAAGACGCTTACCGGCAAGACCATCACGTTGGAGGTCGAGTCATCA 1064537 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| |||| || | || || ||| ||||| || || |||||||| || || || ||| Sbjct 1064536 GACACGATCGATAACGTGAAGGCAAAGATTCAGGATAAGGAAGGCATTCCGCCAGACCAA 1064477 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 ||||| || || | ||| ||||| || | || ||| || || | || |||||||| Sbjct 1064476 CAGCGCTTGATCTTCGCTGGCAAGCAGCTCGAGGACGGTAGAACGCTCTCGGATTACAAT 1064417 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 ||||| ||||||||||| | || | ||| | ||| | || || || || Sbjct 1064416 ATTCAGAAGGAGTCGACTCTTCACCTCGTTCTTCGTCTTCGCGGAGGAAT 1064367 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 434916442867200