Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Taiwanofungus_20camphoratus_20[genbank_20GCA_5F000766995.1_202014- 10-15] 360 sequences; 32,155,604 total letters Query= NC_029996.1 Length=134272 Score E Sequences producing significant alignments: (Bits) Value seq328 107 2e-18 seq223 87.8 2e-12 >seq328 Length=1291088 Score = 107 bits (118), Expect = 2e-18 Identities = 146/204 (72%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 39082 TGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATCAAGCTGT 39141 || || |||||||| || || ||||| || |||| ||| || || |||| || | |||| Sbjct 622306 TGCAGAGTGCTCTCCTTCTGAATATTGTAGTCGGAAAGAGTGCGGCCGTCCTCCAACTGT 622247 Query 39142 TTGCCCGCAAATATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTCCATGATTTTC 39201 ||||| || || |||||||||||||| |||| || | || ||| ||||| ||| ||| Sbjct 622246 TTGCCAGCGAAGATAAGACGCTGCTGATCGGGAGGAATGCCCTCCTTGTCTTGGATCTTC 622187 Query 39202 TGTTTGAGCGTCGCCACCGTATCGCTCGACTCCACGTCCACCGTGATACTTTTTCCCGTC 39261 || | | | | || || |||||||| || | ||||||| | || ||||| Sbjct 622186 GCCTTCACGTTATCGATGGTGTCAGAAGACTCCACCTCGAGCGTGATAGTCTTGCCCGTA 622127 Query 39262 AGCGTTTTAACAAAGATTTGCATC 39285 || || || || ||||| |||||| Sbjct 622126 AGGGTCTTGACGAAGATCTGCATC 622103 Score = 96.9 bits (106), Expect = 3e-15 Identities = 148/211 (70%), Gaps = 0/211 (0%) Strand=Plus/Minus Query 39075 CACCAAATGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATC 39134 ||| | ||| || |||||||| || || || || ||||| | ||| || || |||| || Sbjct 623151 CACGAGATGGAGGGTGCTCTCCTTCTGAATGTTGTAATCAGAAAGAGTGCGGCCGTCTTC 623092 Query 39135 AAGCTGTTTGCCCGCAAATATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTCCAT 39194 ||||| ||||| || || || |||||||||||||| | || | | ||| ||||| Sbjct 623091 CAGCTGCTTGCCGGCGAAGATCAGACGCTGCTGGTCAGGAGGGATACCCTCCTTGTCTTG 623032 Query 39195 GATTTTCTGTTTGAGCGTCGCCACCGTATCGCTCGACTCCACGTCCACCGTGATACTTTT 39254 || ||| ||||| | | | || || ||| ||||| || | |||||| | || Sbjct 623031 AATCTTCGCTTTGACATTGTCGATGGTGTCAGACGATTCCACCTCAAGGGTGATAGTCTT 622972 Query 39255 TCCCGTCAGCGTTTTAACAAAGATTTGCATC 39285 ||||||| ||| || || || || |||||| Sbjct 622971 CCCCGTCAACGTCTTCACGAAAATCTGCATC 622941 >seq223 Length=1670925 Score = 87.8 bits (96), Expect = 2e-12 Identities = 141/203 (69%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 39082 TGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATCAAGCTGT 39141 || || |||||||| || || ||||||||||| | || |||| | || || | |||| Sbjct 1064166 TGAAGGGTGCTCTCCTTCTGAATATTATAATCCGAGAGCGTTCTGCCATCCTCCAACTGT 1064225 Query 39142 TTGCCCGCAAATATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTCCATGATTTTC 39201 || ||||| || || | || |||||||| | || | | ||| || ||| || ||| Sbjct 1064226 TTCCCCGCGAAGATCAAGCGTTGCTGGTCAGGAGGGATACCCTCCTTATCCTGAATCTTC 1064285 Query 39202 TGTTTGAGCGTCGCCACCGTATCGCTCGACTCCACGTCCACCGTGATACTTTTTCCCGTC 39261 || | | | | ||| || |||||||| |||| |||||| | || ||||| Sbjct 1064286 GCCTTCACATTGTCGATCGTGTCTGATGACTCCACTTCCAATGTGATAGTCTTGCCCGTA 1064345 Query 39262 AGCGTTTTAACAAAGATTTGCAT 39284 || ||||| ||||| |||||||| Sbjct 1064346 AGTGTTTTCACAAAAATTTGCAT 1064368 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 429543715368680