Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Taiwanofungus_20camphoratus_20[genbank_20GCA_5F000766995.1_202014- 10-15] 360 sequences; 32,155,604 total letters Query= NC_029997.1 Length=105667 Score E Sequences producing significant alignments: (Bits) Value seq223 104 2e-17 seq328 102 6e-17 >seq223 Length=1670925 Score = 104 bits (114), Expect = 2e-17 Identities = 146/205 (71%), Gaps = 0/205 (0%) Strand=Plus/Minus Query 23610 AATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCAC 23669 ||||||||| || || || ||||||||||| || || ||||| ||||| || || || | Sbjct 1065334 AATGCAGATATTTGTGAAGACCCTCACGGGCAAGACCATCACGCTCGAGGTCGAGTCGTC 1065275 Query 23670 GGACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729 ||||| | || | | || || ||| ||||| || ||| | || || || || Sbjct 1065274 TGACACAATCGATAACGTCAAGGCCAAGATTCAGGACAAGGAGGGTATTCCCCCTGACCA 1065215 Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789 ||||||| | || || || || || || || || || | ||||| || ||||||||| Sbjct 1065214 ACAGCGTCTCATTTTCGCTGGAAAGCAGCTCGAGGATGGTCGCACGTTGTCCGATTACAA 1065155 Query 23790 CATACAAAAAGAGTCCACATTACAT 23814 ||| || || || ||||| |||||| Sbjct 1065154 CATTCAGAAGGAATCCACTTTACAT 1065130 Score = 95.1 bits (104), Expect = 8e-15 Identities = 139/197 (71%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 ||||||||||| || || || ||||| || || ||||| || || || ||||| || || Sbjct 1065105 ATGCAGATTTTTGTGAAGACTCTCACTGGCAAGACGATTACACTTGAGGTTGAGTCGTCG 1065046 Query 23671 GACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCAA 23730 |||||| | || | | ||| ||| ||| ||||| || ||| | || |||||||| Sbjct 1065045 GACACTATCGATAACGTGAAAGCAAAGATTCAGGACAAGGAGGGTATCCCTCCAGATCAG 1064986 Query 23731 CAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAAC 23790 || ||| | || ||||| || || ||||| || || | || || | |||||||| Sbjct 1064985 CAACGTCTGATCTTTGCTGGAAAGCAACTTGAGGATGGCCGGACGCTGTCTGATTACAAT 1064926 Query 23791 ATACAAAAAGAGTCCAC 23807 || || || || || || Sbjct 1064925 ATTCAGAAGGAATCTAC 1064909 Score = 84.2 bits (92), Expect = 1e-11 Identities = 79/101 (78%), Gaps = 0/101 (0%) Strand=Plus/Minus Query 23719 CCGCCAGATCAACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTA 23778 || || ||||| ||||| || || || || |||||||| ||||| || | ||||| ||| Sbjct 1065453 CCCCCTGATCAGCAGCGCTTGATCTTCGCAGGCAAACAGCTGGAGGATGGTCGCACGTTA 1065394 Query 23779 GGCGATTACAACATACAAAAAGAGTCCACATTACATTTAGT 23819 |||||||||||| || |||||||| || | |||||||| Sbjct 1065393 TCCGATTACAACATCCAGAAAGAGTCTACGCTGCATTTAGT 1065353 >seq328 Length=1291088 Score = 102 bits (112), Expect = 6e-17 Identities = 140/193 (73%), Gaps = 2/193 (1%) Strand=Plus/Plus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 |||||||||||||| || || | ||||| || || ||||| || || || || || | Sbjct 622942 ATGCAGATTTTCGTGAAGACGTTGACGGGGAAGACTATCACCCTTGAGGTGGAATCGTCT 623001 Query 23671 GACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729 ||||| | || ||| | ||| | || ||| ||||| || ||| | || || || || Sbjct 623002 GACACCATCGACAATGTCAAAGC-GAAGATTCAAGACAAGGAGGGTATCCCTCCTGACCA 623060 Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789 |||||| | || || |||||||| || |||||||||| |||||| | |||||||| Sbjct 623061 GCAGCGTCTGATCTTCGCCGGCAAGCAGCTGGAAGACGGCCGCACTCTTTCTGATTACAA 623120 Query 23790 CATACAAAAAGAG 23802 ||| || || ||| Sbjct 623121 CATTCAGAAGGAG 623133 Score = 87.8 bits (96), Expect = 1e-12 Identities = 144/205 (70%), Gaps = 2/205 (1%) Strand=Plus/Plus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 |||||||||||||| || || | || ||||| || ||||| || || || || || | Sbjct 622382 ATGCAGATTTTCGTCAAGACATTGACTGGAAAGACTATCACCCTTGAGGTGGAGTCTTCT 622441 Query 23671 GACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729 || || | || ||| | || | || || ||||| ||||| | ||||| ||||| Sbjct 622442 GATACCATCGACAATGTCAAGGC-CAAGATACAGGACAAGGAAGGCATCCCGCCTGATCA 622500 Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789 ||| ||||| || || |||||||| || ||||| |||| || ||| | || ||||| Sbjct 622501 ACAACGTTTGATCTTCGCCGGCAAGCAGCTGGAGGACGGCCGTACTCTCTCTGACTACAA 622560 Query 23790 CATACAAAAAGAGTCCACATTACAT 23814 || || || ||| |||| | ||| Sbjct 622561 TATTCAGAAGGAGAGCACACTCCAT 622585 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 338008116982880